Array 1 75057-73849 **** Predicted by CRISPRDetect 2.4 *** >NZ_SXBZ01000016.1 Clostridium argentinense strain 113/31 contig00016, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 75056 30 96.7 35 ...............A.............. GTGTAAAGAACTAGTAAAGCTAATAGCAGATGCAG 74991 30 96.7 35 ...............A.............. TGACTATAAACATTGTTTTTATATTTAAAATAAAT 74926 30 96.7 35 ...............A.............. TGTTGCATTTTTTCTTTTAAACCTTCTACCATTTT 74861 30 93.3 37 .......T........G............. AATTGATGAACTGAACATTTATATTTTTTGCAATAAA 74794 30 100.0 36 .............................. ATGAGAGGTAATTCGAAGGCATTAGGAATTGAAAAA 74728 30 96.7 35 ................G............. TAGTCTTTTGAATAACTGTGCAATAATTCTATAAT 74663 30 93.3 36 ...............AG............. ATATTTCCAATTTGATCTTGAAGTTTTTTAAGTGCA 74597 30 93.3 35 ...............AG............. GTTAGTGCTAAGTCTATTCTATCTTTTAAATGTTC 74532 30 96.7 35 ...........G.................. TCAGCCTGTTTCCTAAAATCATTAGCATTTCCAGG 74467 30 100.0 36 .............................. TTAAATGTAAGCAACTATGTAAGTTTCTTTCTTTTC 74401 30 93.3 37 ...............AT............. TATTTAGGCATTGACACGTATACCATAGGATTTTCTT 74334 30 90.0 35 ........A.......G.G........... GTAGTTTCTAAATCAATTTCATCATAACCAATAAT 74269 30 93.3 36 ........A......A.............. CCATTTGTAAAACATCCAATTCCTTTATGAATCCAT 74203 30 90.0 36 A..............AT............. AGGATAAGTTTTATTGTTAGAAGTGTATTATAATCT 74137 30 100.0 35 .............................. TACTCTTACCACCTTTGTATTTAAAAGTTGAGCAA 74072 30 100.0 34 .............................. ATAACTACTGTAGTAACAAAGTCTTTTAAATCAT 74008 30 96.7 35 ................G............. GAGGATAGCAACATAAAGTCTCTACTCTGAATACA 73943 30 90.0 35 A.......G......A.............. AACATTGCCATAGACACTTCGTCTAAATTACAATT 73878 30 76.7 0 A..A...........AT......A....TA | ========== ====== ====== ====== ============================== ===================================== ================== 19 30 94.4 36 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : GACGTCCTAAATCTCTAAGAGGTGTATCGCCATCGCCATCAGCGACAGCAGCATAAGTAGTTGCTACATTAGCACTTGTAATCATAGTGATACCTAATAATGTACAAGCTAAAACTTTTTTTAATTTCATTTTACTTTCCTCCAATAAACTAAAAATAATAAAAATAGTATGTGTTAAGCTCAACATGTACTATCTTACCATAACTTATAAGTAATGTAAACATTTACCATAAATGAAATTAAATATTACAAATGCACTCTCGAAATTTTTGTTTCATAAAAGGAAAACTTAAATAGTTGTAGAATAAGTAAGGTAAAGATTATTTTACCAACCATCTTAAATATTAAATACCTCCTAACAAATTGAAAATACAGGCTTATGAGGTATTTTTTAAAAAAATTTCTAAAAACATAAAGCGGTTGGTAAAAATTTTAATAAAGCCTTTATTTTCAATAAGCTAAAGGATATAATGAAAATAAAGAATGGCTTGATTGCAGTA # Right flank : AAAAGGACTATTAGGATTGTGCCTAATAGTCTTTTTTCATTTAAAATATATTAATGTAGTGTTTTCGTTAGGAGCTTTCTTATAATGAATTTATATTTTATATTTATCAATCTAATGATAATTACTTTTACTGTGTAGGCATATATAAATTTACTATTAAAAATCTAAATATTTTTTATCTACATTCCATTTATGGATGTTATAAAATAAGATGTCGAATAAAACTATATATAATATGTAGGAATTTCTTAAATATATTTGATTCTTTTAAATAATAGACGTATAATATGCGTATAAAGTAATTTAAAATAGTCCTATAAATGAATGAAAAATTTATTGGTATGTGTTTTTAGAAATTTACAAATAATATAAAGGTTTGAAGTTAGCAAACCGTTGGTATTACTCAAGTAGATACCATAAATAAATTATTCGGATATACCATTCATAATGATAAAGGTAAACCTACAAATTCTGAATTTATTGCAATGGTTGCAGATAAG # Questionable array : NO Score: 5.29 # Score Detail : 1:0, 2:3, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [14-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 114784-114947 **** Predicted by CRISPRDetect 2.4 *** >NZ_SXBZ01000010.1 Clostridium argentinense strain 113/31 contig00010, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 114784 32 100.0 34 ................................ TAATGGCTTTCTTGATTGTATCACTAACATCTTT 114850 32 100.0 33 ................................ CTTTCAGCCCTGAGTTTATATCTATAAATACAA 114915 32 84.4 0 ................G.......AA..C.G. | T [114938] ========== ====== ====== ====== ================================ ================================== ================== 3 32 94.8 34 AGTTGAACCTTAACATAAGATGTATTTAAATT # Left flank : GAGAAAAAAGGCGATATTACTCATATCTCCGTAGTAACAGGAGCAGACTCCAAAGGCTATTCATTAGTAAGCTGCCATAATGTAGATAGAAATGATGTACCATGGGATTTAGGTTGGAGTGATAAAAAAATAAGGTTTTGGTTAGTTAGAGTACATTATTAAGAAAAATTATGATGATTATAAATAAAATCTTCTTTAAAACACCACAGTAAAGAGTATTTTAACTGTGGTGTTTTAATTTTCAACTAATATAAATTTTAATTTTTTATTTTGTCTTAATGTAATAGCAAATATTTAATTATCCTATTAGTATACCAACACAAAATTTTTCCAACCTCCCTAAAAATAAAACTCCTCACAACCTATTGAAAACTCAAACGTCATGAGGAGTTTTTATCAATTCTTTAAAAATATAAAACGGTTGATAAAATTTTAAGAAAACTATTCAATTTCAATGGTTTTAATGATATGATAAAAATAAAGAATGGCTTAAACACAAT # Right flank : TTCTTCTCTTACGTTTAGCTTGTTATAGTTTTCCACCTCTGGGGGACAGTAGTGAAGCCCTTTAGGGTTACCCTGAGGTGCAGTATAGTTTGGAACAATACCAATAAGTTTAACTAATACTATGGAAACATTAGCAATAATACTCTTTTTGCTAAGAAGTTACTGTATAACTTCAAGAAGAAGTGAATTCAAAATTTCTCTTATAAGAGAGAAATATCAATAATTGTCCATTGTCAATAGTCAATTCTCAATTGATGAAGTTGAACCTTAACATGAGATGCATTATTACATATGGTAGTTATAGCCTATACTATAGATATCATATTTTTTTATTTTTTAAAGAAATTTTTTAATATATGTAGAATTATAAATGTAAGATTTTCTAGTACAATAACTATATTCATTATTAAATATATATAATTCATAATGAATAATAAGTATAACAGTAATATAATCTTATTTATTGACATATTATATTTAAGTAATTTAAATTAGCAATG # Questionable array : NO Score: 5.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGTTGAACCTTAACATAAGATGTATTTAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:78.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 2 130682-130911 **** Predicted by CRISPRDetect 2.4 *** >NZ_SXBZ01000010.1 Clostridium argentinense strain 113/31 contig00010, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 130682 32 100.0 35 ................................ TATATTTTATTTAGACCATTTTGCACATCTGTAGG 130749 32 100.0 33 ................................ AAGTTTATTTTTCCTAGCTGCCATGCTAGGCCA 130814 32 100.0 33 ................................ GGTACAGCTTTGTATTGTTCTTTCAATTTGTCT 130879 32 78.1 0 AT........T.......A......C.A.C.. | C [130901] ========== ====== ====== ====== ================================ =================================== ================== 4 32 94.5 34 TGATTGAACCATAACATAGGATGTATTTAAAT # Left flank : TCAGTTATAAAAATAGGTACAAAGGTAAAAAACATACGTTTAGTTGATGGAGATCACGATATTGACTGTAAAATTGATGGCTTTGGAGCTATGAAATTAAAATCTGAATTTGTTAAAAAGATATAAATTGAATTTTACATAAGTTGTGGTATAGACACTGTAAAAAATGAAAAAAGAGTAGATATATTTATTTTTATATAAATATATCTACTCTTTTTTATTGGGTTTTGTTTTAAGGTTACATTAATAAATTTACATTATGGAGGATATCATGGCATGGTCAACATTAACAACAATTCAGAATATGTCCTAAACTATATAAAATTTTCCCAACTACATTCAAAATAAAACTTCTCCTAATCAATCGAAAAATCAACGTTTAGGAGGAGTTTTTTATTAAATTTATCAAAAATTCAAAACGGTTGGTAAAATTTTTAATAAACCCTTCATTTTCAATGGATTAATGGGTATAATGAAAATAGAGAATGGCTTAATTGCAG # Right flank : TAGCTATAATAAATTTCAATATTGTATATTTAAAAAACTACATAATTATAAAAGGATTTCAACCTATCTAAGTAAAAAATTATTTAGATAGGTTATTTTTTTATTTAAAATATTTTTATGATATTTAATGAACTGTGGAGAAAAATGGAGTAATAGAGGGATAAGGTTAGATAAAGAATGAATTGTTTATTCATTCTTAGTGGAAGACACTTTATCATAGGAAAACCTATGTAGAAGTGGCTGTAAGGATTTGTAAAGAATATATAGGTGGGCTAGAATTAAAGTATGTATATACATTATTTTAATAACTAGTATAGAAAAAGGAGTTGATTTTATGAATAGGGCTATTTTAAGTGTTGATTGGGACTATTTTGTAAAAATTATACCTCAGTGGTGTGGCTCCTATATTGAAAACCAAAGAGGACTTCTTTCCGCTTGGTATAGAAGATATATAGAAGAAGGTATAAAAGGAGTTAATTTAGAGGAAGAAATAAAAGTAA # Questionable array : NO Score: 2.58 # Score Detail : 1:0, 2:0, 3:0, 4:0.72, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGATTGAACCATAACATAGGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA // Array 1 13791-18152 **** Predicted by CRISPRDetect 2.4 *** >NZ_SXBZ01000030.1 Clostridium argentinense strain 113/31 contig00030, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ===================================== ================== 13791 29 100.0 37 ............................. TATTCTTTATAGCTTTATCACAATACTGCTCAATATC 13857 29 100.0 36 ............................. AAAGTATAAGCTAAATCTTCATATCTTTTACGTAAA 13922 29 100.0 36 ............................. GAAACAATAAAGTTTTATGGTACTAACACTTATAAA 13987 29 100.0 37 ............................. TTTACAGGCGACTTTGCATATTTCTATGAAGAAATAG 14053 29 100.0 37 ............................. TAGAGATATTGAAATTAGTAGATTGTAAATAAATAGA 14119 29 100.0 36 ............................. TAGATTGGACACAACAAAATGTAATGCCACAAGTAC 14184 29 100.0 36 ............................. ATTGAAATAACGAAAGAAGAAGCAAAAGAAAAACGC 14249 29 100.0 36 ............................. TTAGATGGAGAATGCGGGAGTGTTGAAGGAGAATTG 14314 29 100.0 36 ............................. ACGAAAAACAAGAGCTAAGTAGAAGAATAGTTCCAT 14379 29 100.0 37 ............................. TTGAAGTTTGTTTATATTCCTTTGCCAACCGAACAAC 14445 29 100.0 37 ............................. GCTAGAACTGTAGTTGAATGGTTTATAGAACAGGCTG 14511 29 100.0 36 ............................. TTGAAGACATTGGGTCAATGAAGTTATACCACAAGA 14576 29 100.0 35 ............................. TATCATAGGCCTAAAACAAAAGAAGAAGCTTTAAA 14640 29 100.0 36 ............................. CAGTTTGGAGAATAAAGGTAGAATGGCGGTATTATT 14705 29 100.0 37 ............................. CACATCTACGGTTAATAGCCCAACAATAACAGTCAAC 14771 29 100.0 37 ............................. AAAGAAATAAATTCTAAAGGTACTGTTAAAGTAGCAC 14837 29 100.0 36 ............................. GATTTACCCGTTCCAGTGTCCCCATCAATCAATAGA 14902 29 93.1 36 ......C.........A............ TTAAAGAAATAACATACATATTCAACTTCCTTATTA 14967 29 93.1 34 ......C..........T........... AGCACAAGGAACGCATGAAGAAGTGCTATGCATG 15030 29 96.6 36 ....................C........ GACACTAAGATTTTTCATAAGTGTTGTAGGTTCTTT 15095 29 93.1 35 A...........................C ACAATTTGGTGTCATGCATATGGCTATAAAAAATA 15159 29 96.6 36 ......C...................... TAGAATAAGATCTAATACCTTCCTCTTGCCTACAAT 15224 29 93.1 36 ......C.............G........ TTCCCTAAAACTACGATACTAGTTTCCTTGTCTTGT 15289 29 89.7 36 ......C.............G.......T TAGTATAATTTGTAGCAATAAGAAAATTATACTAAA 15354 29 93.1 36 ....A.C...................... TGAAAACACTAGGCTTTGCCTAGTTCACCAAAGCTT 15419 29 93.1 35 ......C..........T........... TGTTATGATAGAAGTAGTAGCAGATTAACATATTG 15483 29 86.2 36 ......C...........A......C..T GAAGTTTGGGAGATAGTTAAAAAAGCTGTTTTGTTA 15548 29 86.2 36 ......C...........A......C..T GGTAGCAGTTCTGTAAAGTGCTTATATAAATCTATC 15613 29 93.1 37 ................AT........... ATTCAAGAAAGAGTGCAAAATTGAAATAATAATTATT 15679 29 89.7 35 ......C........A............T CAAATTATTGCTATATTACAAGCTTGGGTTTCTGC 15743 29 89.7 37 .C....C.........A............ TATACGTGTTCAGAAGATGTTAATTTAGCCTTGGCTG 15809 28 93.1 36 ......C...-.................. CCGAACAAAACCACACTCTTCGTGCTAGGCATAAAG 15873 29 86.2 9 ......C..........T..G.......T CCGAGTTAG Deletion [15911] 15911 29 89.7 33 ......C....G......A.......... GGCTTTAATACTCAGAATATGAGTCTAATTTTT 15973 29 96.6 36 ............................T TATGAAGTAGTATGTTTTTTCGATAGAGACGGTAAT A [15982] 16039 29 96.6 37 .................T........... ATGTTATGTTGAATAAATCTGCGCTTGAAGACATTAA 16105 29 82.8 36 ......C..........GA......C..T GGTAGCAATTCTGCAAAGTGCTTAGATAAATCTATC 16170 29 89.7 37 ................AT..........T ATCATAAAATGATCTCTTTTAAATAAAAAACTATCTG 16236 29 93.1 36 ......C............A......... GATGCTCCAAAGATAATATCTGTTGAGCAAGATAAA 16301 29 96.6 37 ............................T TGGATTTGGGGAATAGGTGCTGCAACATATGCTGGGG 16367 29 89.7 35 ..C...C.............C........ ATAAGTAAAGAGTATACATATAGGATATTAAAAGA 16431 29 89.7 36 .....GC..........T........... AGTGGAAAATCATGATTGATATTTATAACCCTAAAA 16496 29 93.1 36 ......C......G............... GTAAAATGCGTTAAGTCAACTTCAAGTAATACCAAA 16561 29 93.1 36 .C....C...................... ATACAATTTTGTATTTTTTTGTTAAAATGTGTACAG 16626 29 89.7 36 ......G.........A..T......... TGAAAACACTAGGCTTTGCCTAGTTCTCCAAAGCTT 16691 29 86.2 36 ......C...G..C...T........... ATCTTATTGTGGGTTTAAAATGGCTTAAATTCAACA 16756 29 93.1 35 ...C..C...................... GAAGAGGATATAAGGGGATACTTAGCAACAAAAGA 16820 29 100.0 36 ............................. GAGCGGAATTCGTTTAATTGGATTATAAATAATATA 16885 29 100.0 36 ............................. GACACGTTATTAACTGTATTAAATCTTTAATATTTG 16950 29 100.0 35 ............................. CTAGCTAAGTCTTGTATCAGCGTAGCAGGATACTT 17014 29 100.0 36 ............................. AAGAAGAAAGATGGAATTTATGCAATAGTAATGGAA 17079 29 93.1 35 .....GC...................... TAGCTCCTTGCAGTTTGTTTATACTCCTTTGCCAT 17143 29 93.1 36 ......C.............C........ GCAAAAGCATATTCAAATTCCTTGTAAGCGTCTAGG 17208 29 89.7 36 ......C..........T....C...... TATTATGCTAAAAAATATTAGAAGTAGAAAAAACAT 17273 29 93.1 36 ......C...............C...... AAGTAAACCCATCCTGCCCCGAAAAATAGTTCTACG 17338 29 93.1 36 ......C......A............... GAAAAGAGTAAGATGACTTGGAGTTTTGATAGAGTT 17403 29 86.2 37 ..C...C..............G.....G. AGTGCTGCTACTTTTTCTATAGTCCACCCCTTCTTTA 17469 29 96.6 36 .................T........... TTATGGATAGAAATGTTGGTAGAAGCAATGCACAAT 17534 29 93.1 36 ......C........C............. TAGCTCTAATAATTTAAATCAGTAATAAGGTTTAAA 17599 29 86.2 37 ......C........C.T..........T GGTATTGAAAAAGAAGTAAACATACAAATAGGAGCAA 17665 29 100.0 37 ............................. ACTGTAATTAAAATCAAACAACAATTAGACCCCAAAT 17731 29 89.7 36 ...C..C..........T........... GTAAGAATTGATGAAGCTAATAATTCTATACAAGAG 17796 29 93.1 36 .....GC...................... CAAAGAAAAAGAAAAGAAGCAGAGTAGTAATATCGG TAT [17809] 17864 29 89.7 36 ......C................GC.... AAAAAATCCGTTATCATACACTTCATTGTCTACATT 17929 29 82.8 36 ...A..C...........A.C.......T CATTTATCCAGACATAGCTTTGCTACACATAAGTTA 17994 29 93.1 37 ................AT........... AGTACTACAGAACTATCTTCCAATGGAACATTCAATC 18060 29 93.1 35 ......C.........T............ AATATAGAAATTATTTCTAACCATAAAGCCATAAA 18124 29 89.7 0 ..................A.....C..G. | ========== ====== ====== ====== ============================= ===================================== ================== 68 29 94.1 36 GTTTTATATTAACTATGAGGTATATAAAG # Left flank : TATTTTATAGAGGATGAACCATATAAGCCTCTTAAAGCGTGGTGGTAGAATATGTTTGTAATAATAACATATGATGTTGGAGAAAAGAGGGTCAATAGAGTAAGAAAAATATTAAAAAAATATTTAATTTGGACCCAAAATTCAGTTTTTGAGGGAGCAATAACAGAGGGAAAACTAAATAAATGTATGGCAGAAATAAATAAAATATCTAATAGAAATGAGGATTCAGTTTACATTTATAAAGTAAGTAATCCACATAATATAAAAAAAGATGTTTATGGTATAAATAGAAATTTAGATGACTTGTTTATATGAGTTGCAGTAAAGTGCATTTTATATAGACATTAATAAAATAAAGGAATATCAATACTTTACGGTAGTTTTTAATAAAAATAAAAAAACACTATTGCTACTTTACTGCAAAAAGGTATAATTTAGGTATCTAGGTTAGCCTTGTAGAATAAGTAATATCAGTGCTTTTACTGTTTTTTAAAAATGGG # Right flank : GAGTGTTAGCAGTTGTTGTATTTTATAAACAACTGTACCAAATAATAATTAATAAATCTCCCAATAGTATTTCCTAAATATTTTATACAAACAATGTTTAGGAACATTCGCAATTTTGGAAATTTATTGGCAAAGGTGAGAAATTTGGAATTAATTTATCTTTGAAGCTACGGAGTAACTTTCTATAAAAAACTAGCATTTATAGTATCTCCACAGTATTAGTTAAATTTATTAGTGTTGTTCCAAACTATACTGCACCTCAGGGGAACCCTAAAGGGCTTCACTACTGTTCCCCAGAGGTGAAAAATTATCAATCGTAAAAAATTAAGAGTTAATAATTAAGAAGGAGTTAATAGAAGAAAAATAGAAATTACTTATAAAATAGAAAACTAGGAGGAAAATATGCCGAAATTAAATATTGAAGACTATAATATTCATTACGAAAGCTACGGAAGTGGGGAACCAATTATATTTTTATCTGGAATACTGATGAGTACAAT # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.70, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTATATTAACTATGAGGTATATAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: F [matched GTTTTATATTAACTAAGTGGTATGTAAAG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [10-54] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //