Array 1 367270-367744 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235896.1 Anabaena sp. PCC 7108 Ana7108scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 367270 37 100.0 36 ..................................... ATGAACAGATGATCATTCAAGATGCTCACTATCTAC 367343 37 100.0 33 ..................................... ACCAAATCAGCGAATACGTCACACCGGAAACTT 367413 37 100.0 40 ..................................... TAGATCCAAATATCCCCAAGGACGCATAGATGTTTCTGTA 367490 37 100.0 36 ..................................... AGCTATCTCTTTTAGACTAATATTACTTTCTTTATC 367563 37 100.0 36 ..................................... ATTTCAAATGTAATATCTTGAAGGTGGTTTACTCTA 367636 37 100.0 35 ..................................... AGCTGAAGTAGGCACAACTGTGTTACCAGTACCAG 367708 37 94.6 0 .......................A...........G. | ========== ====== ====== ====== ===================================== ======================================== ================== 7 37 99.2 36 ATTGCAATTTCACATAATCCCTATTAGGGATTGAAAC # Left flank : GCCAGAAAAAGTATTTGGTTAAGGGACTGGTTCCTTTACCAACAACCTGATCGACTGCTAGGGCGACGTTTTCGTCTAACCAGAGAATTTTTAAAATGAACTTGGTCAATTACACCTCCCGGAAAAATCCGGCTATGACATTACTAACGTTAGGGATGCTGGCGGCGGTCTACGCCGACGCTTATTTTAACGCAAACTCTGACCAATTGACTACTGAGAATTGTTGATGGATGATGGTTGAGGGGTGATTTTTGCCTAGATTTTTTTCCCGGATAGCGCGGGGGGGTGGGTGTTGAAAAACCTGTGACTCCAAAAAAGCCGGAAATCATTTTGTAGCAAGACTTTCCAGCTTTTTTGAGCTTGAATCACCCGCGCACCTTATCCAGACTGGGTTTCAGCCATTTTTAATCTTGACACGATCCTGGAAATCGACTATGATTAGACCACCCGCGCAATCGAACCTTGAAAACCAAATACAGTCAGCCTTTCCGGCTCCTGCT # Right flank : CTATAGCAAAATGACAAATTCAGGAATTTCTACATTAGGGATGAAAGCACAGTCCCAATCCTGGAATATGATAAAGATTCCAGTTTCCAGTTGCTTTCATGACCAAACAAACAAACACAATCGTCGTTTTTGATATAGATGGAGTAATCCGCGATGTCGGTGGCTCATATCGCCGCGCTTTAGCAGATACTGTAGAGCATTTTACCGACGGGGCTTATCGTCCCACACCTGTAGATATTGACAATTTGAAATCAGAAGGGATTTGGAATAACGATTGGGAAGCCTCCCAAGAATTCATTTACCGTTATTTAGAAACCCAAGGACAAAAGCGCGAACAACTACAATTAGATTATGAAATTATCGTTACCTATTTTCAAACTCGTTACCGAGGCACAGATTCCGAAAATTGGAATGGCTATATTTGTAATGAACCATTGTTATTACAACCTAGCTATTTAGAACAATTGACACAAGCAGGAATTAGTTGGGGATTTTTCAGT # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCACATAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.42%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.00,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 2 790836-788658 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235896.1 Anabaena sp. PCC 7108 Ana7108scaffold_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 790835 37 100.0 35 ..................................... CATAACATTCTGAACAAACTTTAAGGACATACCAG 790763 37 100.0 33 ..................................... TTTCTATTGCATTTACTAACATCAATTTTCAAA 790693 37 100.0 34 ..................................... TGATGAACAAGTCTTAGAGGCTATCAAGCTAAAA 790622 37 100.0 35 ..................................... TTAAAGCAGAAGATCAGTGGTTAACACAATGCTTA 790550 37 100.0 35 ..................................... ATAATTTCTCCACCTGGTGACCATAAAACCCAACT 790478 37 100.0 37 ..................................... TATCTCTACCTTGTGCATATCACTATCCCCTAAAGCA 790404 37 100.0 38 ..................................... AGGAAGGTTACTATATCTTCCCCTACTCCTTCTGATTG 790329 37 100.0 39 ..................................... CTTAACATTCCAATAGCCAATTCTCTTTGTGCTTCAGGA 790253 37 100.0 38 ..................................... AATACCTAACTTAGATAGAGCTTCTTTGTTTTGCTGCA 790178 37 100.0 34 ..................................... AGGGTTACAGTAGGAGTCTAAGAAAGCATGGATT 790107 37 100.0 39 ..................................... AGTAAACTAAATACTCCATATCCAATGAAAGCTATGGTA 790031 37 100.0 37 ..................................... CTTCAGTAGACAACATTGAGGATGACAATTTAGCATT 789957 37 100.0 41 ..................................... TAGATAAAGAAGTCACTAGATGTTTCTTAGGTAACTTAGAG 789879 37 100.0 35 ..................................... AATTAAAAAGATTTACCTCTGATAAAGCTAGACTG 789807 37 100.0 34 ..................................... GATGCAAGGGTGTAAAGGACTTGGCGCAGAAGCG 789736 37 100.0 43 ..................................... TGACAGTGACAATCCTGTGGATGCTGATGAGATGGTAATTCAG 789656 37 100.0 37 ..................................... CCATTTGTTCCAGTATCTGCTACAACGAGCGATCGCA 789582 37 100.0 35 ..................................... GCTGAAGCTCTTGCTGTCAGCACGTTCCAGATTAT 789510 37 100.0 41 ..................................... AACGAAATAGTCTCAATTGCGATCGCAAGATTTACAGATAT 789432 37 100.0 33 ..................................... GCCCTGGCACTCCACGAACCGTAACGCATTCAT 789362 37 100.0 35 ..................................... ATCTGGATCTAATGTTGCGCCTGAGTCGATTTTCG 789290 37 100.0 34 ..................................... ATGAGACTTCAACCCGCCCTGCCAATACCAAGAA 789219 37 100.0 36 ..................................... TCTGTTGAAATATGCAAGCCTGTTAATCAACAATTT 789146 37 100.0 41 ..................................... CTAATGGTAGGGGTTATTCCCTACCTTAACTTTTCACTGTT 789068 37 100.0 38 ..................................... ATTGATATCTAGTTTTGATTCAATAACTTTGAACTCAA 788993 37 100.0 35 ..................................... CTTTTAAGCAAGTGCCTCTATGCGGACAAATCATG 788921 37 100.0 42 ..................................... AATTCCAATTAATAAGATTAAACCAACTGAATGTCAGGGAAA 788842 37 100.0 37 ..................................... ATTCATATTCCCCATGATGGCAAAATTCAACTGCCAA 788768 37 100.0 36 ..................................... ACAAGCAGGAATACCCGACTTAGCGAGCGCAGTCAT 788695 37 100.0 0 ..................................... | T [788661] ========== ====== ====== ====== ===================================== =========================================== ================== 30 37 100.0 37 ATTGCAATTTCTATTACTCCCTATTAGGGATTGAAAC # Left flank : ATGAATGTTGTTGTTTCTTACGATATTTCTGAGGATAAACGCCGGACTAAAATCCATAGTATTCTCAAGTCCTATGGTCAATGGGTGCAGTATAGTATTTTTGAATGTCAGTTGACTGATACTCAGTATGCTAAGTTGCGATCGCGCCTCAATAAGCTGATTAAACCTGATACTGACAGCATCCGCTTTTATTTCCTTTGTGCTTGCTGTTATGGTAAGGTCGAAAGAATTGGTGGTGAACAGCCCCGTGATGAGACGATTTTCTTCGCTTAATGCGCGAGGGGGTGGGTGTAAAAAATTCAGGTTGTCAAAAAATGCCTGAAATCCTATCTATATAAGGCTTTGATTGATTTTTTCTTGTCCAACCCCTCGCGCACCTTACACAGCAAGGCTTTCAGCGTTTTTCCCTCTTGACACGATTCCTGAAATGGACTATGATGATATCGCTCGCGCAATTGAACCTTGAAAACTACATATATATAGGCTTTCAGCCTCCCGCT # Right flank : TATAAAATTGGAGAAAGGATAATTGGAAAACAAATATAGCAATCCTATTTGATTTATGAACGTAGTTTTTAAAACTAACCACTCCAGACGCAGAAAGCGCAGAAGTAGAGAAAAAGAAGTGTTCATATCTTATTTAGGATTGCCATATTACCCATTAACCTTGATCTTAATCCTGAATATACTCTTGCCCAGTCACTAAAGCAATTTCAGCCCGGACAAATTCTCTACCCAAATAAGCCGCATGGTTTAATAAGGTAAGAGGACAGGGTTGAGTTTCTTCAAAAATCTTTACACACAGTTCCTTTGCTGTCCTGCCACTAAATACAGTTGATTGAGTTCTTTCCACCTTTCCCCGTGCTGGAATTACCTTCCCTGTTTCTGGATCTACAGCTAAACCGCGATCATCAATTACATTTGTAAAATGCTTGGCGTAAATTAACTGTTCATTGCGGTCTATGTAAATAATGAAATAACCACTAGGATCAAGGTCAATATGACGC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCTATTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.91 Confidence: HIGH] # Array family : NA // Array 3 1473429-1473118 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235896.1 Anabaena sp. PCC 7108 Ana7108scaffold_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================================== ================== 1473428 26 100.0 50 .......................... GTAAAGACATGATTGAAATCTCCAAAAATTTAATAGAAAACTTTACCGAT 1473352 26 100.0 47 .......................... ATTCATCCGAAACTGGGCATTAGCGGGCGCTGCGAAACTTTACCGAT 1473279 26 100.0 38 .......................... GGTTTTCGTACGACCAGAGCGAAGAATAGCCTCGATTC 1473215 26 100.0 47 .......................... TACAACCAGCAATCACAGCAGACTTGATAGAGAAAACCTTTACCGAT 1473142 25 88.5 0 .G..................C-.... | ========== ====== ====== ====== ========================== ================================================== ================== 5 26 97.7 46 CACTTTAGATTGGAATTAATGGAAAC # Left flank : TAGGGGTTTAGCAATGCTAAACCCCGTCTTTTATAGAGATTTAGTAACTTTTAATCCTGTAAATCCTCAAATCCTGTAAATCCTGATTCAGACAAAAAATTTTGACTTTTTCTCGTTCCCATACTCTGTATGGGAATGAATTTAATAAGGCTCTGCCTTCGATTAAATCAGAGTCAGAGCCTCTATGATGGCATTCCCAGTCAGAGACTGGGAACGAGATAACGAGATAAATTTTTGGTGATCCAAAGGCTGAAATTACCACCTGTGATGAGTTTCAGCGATTTATAGACAAAAATTGTATCATCGTCATCGACACACCTCGGCAAATCCCCGAAACCCTATATTTTTCGTTGAGGTGTGTCGATTGCTTACCAGATAAGGGTTTGAGCTATGTACTTGACGTTTTTTTTGGCTATGTGTACATTGTATTTGAGAGGTGTGTCGATTTGGTGGCTGAAACCTTTACTGGGTAAGGCTCCCTAGACGAACTCTTTACCGAT # Right flank : TCAGATCCCCGACTTCTCTCATCAGTTCATCATCTATGAACAACATGAAAAAAGAAGTCGGGGATCTTGTATTAAAGTAGTTTTTAAAAACTTTCTATTTGATAAATAACCTAAATTGAAATTAATTAAAATCCCAAAAAATAAGGGTTTAGCATTGCTAAACCCCTACATTTATTCAATACTAAACCAAAAGCGTTTGCATTAAAGGTTGATCACTATTTAACTTTCCAGTTCTCAACCATTCAGCCATTTCATCTGGTGCTTTTGCTTGAGTTAGCTTTTCGCGTAAATAACTACCTTCAAGAATTTCTTTCTCCAACAATTCCTGAGAAATTTCTTCGAGTAAATCGCGGTTATTGTGCAGAATACTTAAAGCAATGTGATGAGCGTTATCAACAATTTCCTTCACTTCTCGGTCAATTTCTGCCGTCATTTGCGGACTAATTGTACGGCGAGGATTTCCATAACCTTCAATAAATTGCTGTTGAACTTTTTCAAAA # Questionable array : NO Score: 2.88 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:-0.06, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CACTTTAGATTGGAATTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.23%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 4 2943255-2944248 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235896.1 Anabaena sp. PCC 7108 Ana7108scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 2943255 37 100.0 41 ..................................... AGAATCGTACACGTATTCAGCCATTATTTCTTACCTTCGTA 2943333 37 100.0 35 ..................................... GTGGCAACATAGCCAGTGTGTGCAGCTACATCGAC 2943405 37 100.0 34 ..................................... AACAATTATCGATCCAAGAGATAGAACCAAACTA 2943476 37 100.0 39 ..................................... AGCTATAGTTGGTGCTACGTACTTGATGAAAGCTCCAAG 2943552 37 100.0 36 ..................................... ATCCCTATTACCCAAATCCCAGCGCCCAACGCCCGA 2943625 37 100.0 32 ..................................... GCGATCGCGGATTTAACGGACTGCATTCAAAT 2943694 37 100.0 35 ..................................... CCAACGCAAATAGCCGTAAAACTTATAAAATTATT 2943766 37 100.0 34 ..................................... GACACCTTTCAATTGTTGTGTAAATATAGAGATA 2943837 37 100.0 40 ..................................... TCCAGGCGCACCGGTGCAAATGAGAAGGACGGCTAAATCG 2943914 37 100.0 38 ..................................... TCCGCCTTTGATGGAAAATACTAGACCCGATATCGGAA 2943989 37 100.0 31 ..................................... ACCAGATCCATAACAGAGGCTTTGTAAGCAT 2944057 37 100.0 41 ..................................... TAGCACTGCTAAACCCCTACTGGTGTGAATCTATGCAGCAA 2944135 37 100.0 40 ..................................... TTGACTGAGGCGATCGCATTCCTAAAAGTAAATTTTGGAG 2944212 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 14 37 100.0 37 ATTGCAATTTCACATAATCCCTATTAGGGATTGAAAC # Left flank : ATAATGTGGCGCGGAATGAAAGTGATGTTAATTTCCGTAACCAGTTATTTGTGGCTTTAACGAGGGCGCGAGGTTGGGCGAATCTCAGTGGTGTTGGTAGTTATCCGATGTATGATGAGATGCGAAAGGTGATTGCTAGTGGGGAGAGTTTTACTTTTACTTACAAGCGTCCGCCTAAGCGGGATATTGGGGATGGTGATTAGGTTCAAATTTGGTAAAGTAAAAATAATGAGGTGGTAAAAAGCCACGAAATAAAAAGATTTTCTTCCCCTAATGCGCGAGGGGGTGGGTGTAAAAAATCCGATTTCTCAAAAAATGGCTGAAATCATATCTACATAAGGCTTTGATGGATTTTTTCTGTCTACACCCTCGCGCACCTTACACAGCAAGGTTTTCAGCGTTTTTCACTCTTGACACGATTCCTGAAATGGACTATGATGATATCGCTCGCGCAATCGAACCTTGAAAACTACATATATATAGAGTTTCAGACTCCCGCT # Right flank : CTGGGAACGAGATTTTATTGATAAACAAAAACCGGAACTCTTTTATATGCAGGTGTCCCACTTTTTGGGTCAATTTCCGCTTTAAATAAAACATTAGTTTCAGGATAAAACATAAAAGCTACACCTTCACGAATTCCTCCACAAATAATTTCAATATTGTTTAATTCTCCCGCATTTCCTTTAACTGTAACTCGTTGATGTTCCTGAAATCCTGCTTTTTTAACATCCAAACTATTCATTAAAATACAATAACGATGGGGCATATTTCTATATTTATCTTCACTGCGATAAACTACAGTATTATGTTGTCCATAACTGCGTCCTGTTCCTAATATGACTATAATTCCTGACTGATGTTCTGAAACACCAAAATCAGATTTATTCGGTAAAGATAATTGCGGTAATGGTGTGACAAACATCTGCGCTTTACCATCAGATGTGGGAAATTTCGGTTCTTCTAAAATCCGTCCTGCAATGATAAATTCTTCTTTAGTTTTATC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCACATAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 5 3732732-3733873 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235896.1 Anabaena sp. PCC 7108 Ana7108scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 3732732 37 100.0 35 ..................................... TATTTAACCATCATTACTATTGATGGGCAGAACAA 3732804 37 100.0 39 ..................................... ATAGCTGCATTTACATTCTGTGCCTACCAACCCCGGAGG 3732880 37 100.0 39 ..................................... CTGTGCAATTACCAAAGAATCAAATAATTCACCAGTATC 3732956 37 100.0 36 ..................................... TCTTTGATTATTTGGGTAGGTAAGTTAAGCTACGCA 3733029 37 100.0 40 ..................................... TCCGATGTTTCAGGACTCATCAAAAAGATATCTATTAGTT 3733106 37 100.0 40 ..................................... GCCACCAATCGAGATGAGATTGACGAAATGCTTGCTAGGT 3733183 37 100.0 32 ..................................... GCTGCGATCGCACTTGAGACACTTTTACTACT 3733252 37 100.0 37 ..................................... TGAAACTACGGCATTATATGAAGCTTGGAACGGCAAA 3733326 37 100.0 35 ..................................... TGCAATTTTGGCTTGTTCTTGCTCAAATTCAAATT 3733398 37 100.0 38 ..................................... ACAAACTACAATCCAAATTTTTCTAGAGCGAAAAATTC 3733473 37 100.0 36 ..................................... AATTGGTGTAGTTAGTCCTGGATCAGAAATAGCTAA 3733546 37 100.0 40 ..................................... AACTAATCATCTAATAATCCTTCTACTAAATCCTCAAGTA 3733623 37 100.0 37 ..................................... GCATCCAGACTCATAACCAGGAATCCAGAAAGGACAA 3733697 37 100.0 34 ..................................... TTATGGTTGGAGATTTTGGAGGTAATTTATCTTT 3733768 37 100.0 32 ..................................... TCTTGAGAATTCATGACGGATTCTATTTGCAT 3733837 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 16 37 100.0 37 ATTGCAATTTTCATTACTCCCTATTAGGGATTGAAAC # Left flank : TACACGCTACATCTCACACCAATCCAGTATATATTGATGAGGGAGTGGTACATTATGGTGTTCCTAATATGCCAGGGGCAGTACCTTGGACAGCAACTCAAGCACTCAATAACAGTACTTTACCTTATGTTGCACAGTTAGCTAATTTGGGAATTAAGGCTTTGGATGTGAATCCAGCTTTGGCTAAGGGTTTAAATGTGCAGAATGGCCGTTTGGTACATCCGGCTGTACAAGAGGTTTTTCCTGATTTGGTCAGTTAATCGTCAGCTTTTTTGCGCGGATGGGTGGGTGTAAAATTTAGATGTTGTCAAATAATGGCTGTATCTCTTGATGGGCTTGGCTTTGCGGCTATTAATGTTGATGAACCATCCGCGCACCTTACACTGACTGGGTTTCAGCGTTTTTTGTTCTTGACACAATTCCTGGAATGGACTATGATGACCATGCTCGCGCAATCGAACCTTGAAAACCAAATACACAAAGGCTTTCAGCTTCCCGCT # Right flank : CAGCTATGTTTATGAATAATTTTTTTAATGGCATAGCTACCACGCAAGCTATCATACAAAATTAGTATTACAAGAGAGAAATTCTCGACGATGCAACGGTTTAACTAAGCGCAAAGCATACAAAATATAATATATTTTAACTAACTTAATCTATATTAATTGCAACTTATAAGCGCAGAATATCCTGTTACACAAAATTGGAATAAATACAGAAATTAAGAGATTATGGAAATAATTGCAGGTATTTCATAGAGGATCAAGTCATCCATGAATAAATCATTAGATCCAACACTATCAACTCAAATAGCAGAAAGCATCAAAAGTAAAGCTAAAAAGCCCTTTGAAAATGCTTATAAAGCAGCCTTAGTAACTGAGGATTCAAGGTATGTTCAAGGTTTTTTAGTATTAACTGGTCAGCCATATAAACCAGTTGAACATGGTTGGATTGAGTTAGGTGATATTATTATTGACCCCACTTTTCCTTATCTGCAAAGAAATCC # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTTCATTACTCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.50,-5.50] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [51.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.27 Confidence: HIGH] # Array family : NA // Array 6 5364935-5366442 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235896.1 Anabaena sp. PCC 7108 Ana7108scaffold_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================ ================== 5364935 36 100.0 35 .................................... TGAATCCATGAAACAACAGTTTCAAAATGTTAGTT 5365006 36 100.0 33 .................................... TTACATTGATAGCGTCGAAGTGAAACACTTCGT 5365075 36 100.0 44 .................................... GTAACTCTGTTGGATTACACCAAAACCGAAACTCCGCTCCGTAG 5365155 36 100.0 41 .................................... GTTAATTTTAGTACAGACTAATTTAAGATGTCTAACAATAA 5365232 36 100.0 35 .................................... TTAGAATACCAATCAACAAATGAGTTCAAAGAAAA 5365303 36 100.0 35 .................................... CCTCTCACTAAATAGAGAGATTGCTGATGCTTTTA 5365374 36 100.0 41 .................................... TCTAGCTCACGCTGATGCCGCCAAAATCGCACTTAATAACT 5365451 36 100.0 41 .................................... GAGCTTTATATAGTGAGCTCAGACGAATTCATCTTGCCGAG 5365528 36 100.0 31 .................................... TAATCCCAAATGCAGTTGATACTCTGCTATT 5365595 36 100.0 41 .................................... TTGAAACACGTCTTTCGGGGGCACTCAGAAGACTTGCGGAC 5365672 36 100.0 36 .................................... ACAAAATGGAAACGCTGCCTTCAGCGCTGCCATTTC 5365744 36 100.0 41 .................................... CAGCTTTGGCGGTAAAACATAGGAAAAAATAAGGACTTGTA 5365821 36 100.0 35 .................................... TTATCCAAGAAAATACTAATGGCGAAAGAATACTT 5365892 36 100.0 37 .................................... GGAAAAGACGGGCAGCTATTGGCAACGACAAATGACA 5365965 36 100.0 41 .................................... TCCCATAGATGATAACCAGCCAAAGAGTCATAAGCGTGACT 5366042 36 100.0 37 .................................... TTATCGGAAAAGTTGGATATATCGACAGAATATCCAA 5366115 36 100.0 39 .................................... TTTCGGTCAAGGCGGTAATTCTGGTGGTAATAATATAGA 5366190 36 100.0 35 .................................... TTTCCAGAGCTTTCAGCAGAAATTAGATTAGAAAC 5366261 36 100.0 41 .................................... TTACTTGGCAATATCTTGTGCCATTCTTATAAAAAAGAAAA 5366338 36 97.2 33 ...................................T TTTGCGAAACCAGCAAAAAAATGCATTCCCCTT 5366407 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================================ ================== 21 36 99.9 38 GTTTCCAATTATTCCGAATTAACCCAATCGGTGGGG # Left flank : GAGAAAAGTTTATTTTATTGCAAGGTGAAGATGTGTTGAAAACTTACACATTTAATACCGGAGTTGCACAACATAAATTTTGTGGTATTTGTGGAATTCATTCTTTTTATATTCCCCGCAGTCATCCTGATTGTATTGATGTGAATGTGCGCTGTTTAGATGGGAATGTAATAGATAATTTTGAGATTGTGCCGTTTGATGGTGCTAATTGGGAGGATAATATTCATAAGTTGGTTAATTGATTATAAGCTGTTTATCCAGGGGAAACGCATCTAAATTTTATTGACAAAATACCGTTTTAATGTGTAAACGAAGAAATCCGCATTTATCGTTTGATTGATTTTTTCAAAGTCATAGTGATGAACTAAAATATTGTTAATAAGTGGTCGTTAATGCGAATATTTTGGTCATTATTGAGATTGAATTGTCCTTATTGATAAGATGCGTTTCCCCTGGGGGAATACTGAAGTAGAAGAACTTAAGGGTGATAACAAACTAGC # Right flank : GAGTTCGTTTAGCAGCCCTTACCCAGTAAAGGTTTCAGACTGCAAATCGACACCACTTTTAAAAGTATAATACATTTATCCAAAAACCGACACATACACACACCTCAAAACCTTGTCCTACAAGCAATCGACACCACTCCACGAAAAATATAGGGTTTGGGCAATTCTCTGACTGGTGTCGATAGGAAATTAAAAAACACACCCATAAAACCTTCAAATCTAGATGACATAATAGTTTGGAGGTGGTTGGGGTACTTCACCACCAATTGTTAACACCCTCTCAACAGCTTCTTGGGATATCCAATAAAACCGCACACTATCTTCCGCAGGTTTAACTAACTTTCTCACATTTATATAAAGTCGTCGCATTTCCTCCAAACTCAAAAAACGATTGCCCTTGATACTTGAAAAGGATAGTAGTTTCCAATTATGCGTCCCCACATGGTTAGTGGAGACTACTTAATGATTTGGATAAAAATAAAAAGGATGTAGTTTCCAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCAATTATTCCGAATTAACCCAATCGGTGGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 7 5367408-5366861 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235896.1 Anabaena sp. PCC 7108 Ana7108scaffold_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 5367407 37 100.0 35 ..................................... AAAGACCCCAAACCTAATAAACATTTCACCATACT 5367335 37 100.0 40 ..................................... ATGGCAAAGCAACAACTTCTAGTGATCGCACTTCGAGAAG 5367258 37 100.0 36 ..................................... CCAAGGCTTTCTGCTGCTGTTGGGATTCTTGTTCTA 5367185 37 100.0 36 ..................................... GAAGCTTCTATAGGTTCGGTTGGTGTGGCGTGTTGA 5367112 37 100.0 34 ..................................... AATTTCATAAGATTCTCCTTATTTAACTATTTCA 5367041 37 100.0 35 ..................................... CCTTGATTTAGCAGGTAGCAGTGAGCATAAGCTTC 5366969 37 100.0 35 ..................................... TACATCCTTTTTATTTTTATCCAAATCATTAAGTA 5366897 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 8 37 100.0 36 GTCTCCACTAACCATGTGGGGACGCATAATTGGAAAC # Left flank : CAAACACGAGTATACCAACAAGCCTTTGCAGAAGGTGAGCAGAAAGGAGAGCTTAGAGGAGAACAGAAAGGAGAACTTAGAGGAAAACTACTAGCAGTACCAGCAATGTTAGCTGCTGGTTTGAGTGTAGAACAAATAGCACAGGCTTTAAGTTTATCTCTAGATGAGGTTAGACAAGCTGCACAGCAATAATTTTCTAGTTGATTATGGGATACTTTAAAGGAAATCACCTAACAACACTACCTAAAACTGCGCGAACCAGGGGGTGTATTTATCGAACGCTTGTTATATAACCTGTAAAGCCTTATCAGCTATGGCTTTAGAGGTCTTGAGGAAAAAAGGAGGCTCGCGCAAACTCTGTAATCCATACCAGGAAAGGGTTTGAGGTATTTTTCATGAAGGGAGGACTTGACAAGCGATCGCTCAAACGGTACTTTTTAATTTCATCCGCGCAAACTGGTGTCACAAGTCTTGTATATCAAGCTTTCTAGACTCCAGCA # Right flank : TACTATCCTTTTCAAGTATCAAGGGCAATCGTTTTTTGAGTTTGGAGGAAATGCGACGACTTTATATAAATGTGAGAAAGTTAGTTAAACCTGCGGAAGATAGTGTGCGGTTTTATTGGATATCCCAAGAAGCTGTTGAGAGGGTGTTAACAATTGGTGGTGAAGTACCCCAACCACCTCCAAACTATTATGTCATCTAGATTTGAAGGTTTTATGGGTGTGTTTTTTAATTTCCTATCGACACCAGTCAGAGAATTGCCCAAACCCTATATTTTTCGTGGAGTGGTGTCGATTGCTTGTAGGACAAGGTTTTGAGGTGTGTGTATGTGTCGGTTTTTGGATAAATGTATTATACTTTTAAAAGTGGTGTCGATTTGCAGTCTGAAACCTTTACTGGGTAAGGGCTGCTAAACGAACTCCCCACCGATTGGGTTAATTCGGAATAATTGGAAACAAGGGGAATGCATTTTTTTGCTGGTTTCGCAAAACCCACCGATTGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCCACTAACCATGTGGGGACGCATAATTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.90,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA // Array 8 5379097-5378478 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB235896.1 Anabaena sp. PCC 7108 Ana7108scaffold_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 5379096 36 100.0 36 .................................... TCGCTCTTGCCAATATTTACGGCGACTAACTCATTT 5379024 36 100.0 38 .................................... TGTTTTTGTTGCTCGGATTGCTAGAAAATAATCCCATG 5378950 36 100.0 37 .................................... ATTGCGTTGCCCGAGGGGGCTCCGCGAAAAGTGCCTT 5378877 36 100.0 38 .................................... GAACGAATTGTGATCCGTTGGAACAACCATTTGCATTT 5378803 36 100.0 40 .................................... ACTCTGGAGTTTTTGTATCTTTGTATATATACGCAATCCC 5378727 36 100.0 40 .................................... TATCAATTGTGGTTGGCACATTGACAGAAAATTCTCCCAA 5378651 36 100.0 34 .................................... GTTACGTCCGTTAGCACCTAAACAGTTGCTATCG 5378581 36 100.0 32 .................................... CTTTCTACGGTCATATTCTGAACCTGTCACTA 5378513 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================== ================== 9 36 100.0 37 CCCCACCGATTGGGTTAATTCGGAATAATTGGAAAC # Left flank : GCAAAGGTAGATTTACCGCTTCCTGGTGTCCCAATGAGAAAATGAGCGTAGGCTTTGGAGTCGGTTTTAGCTGCCTGTTGAGTCTTGCGTCGAGATGTTGACATATAAGGTATAATTTTATAGTTATTTTACTAATTTATTTAAATATGCAAATCAAGTTAAATATTTGAGGTATGTGTTTAATCTTAGTTGGGTATAAATGGTAATTTTACATTGCTCGTGCGAATGACCAAGAAGATATTTTGTTAAACTAAGTTTCTATCAAAGTCTTTCTGTATCTAGGTTTGAGGCTATTTGGGGAGGTTTTGTATCATGACTATCGACACCAGTCAGAGAATCGCTCAAATCCCTATTCTTTCGTTGATTGGTGTCGATGGCTTGCTGTGTAAGGGTTTGAGCTATGTGTTTGATTAATTTTTCAGATGGATTTATGATGTTTTTTATAGTAGTGTCGATTTGCGGTCTAAAACCCTTATTGGGTAAGGGCTGCTAGACGAACT # Right flank : TTGTTTGACAATTATAGGAGTTACGCATTGACAAAAAACATTAAATATATATGGACGTGAAAAACACATTTATCGTAGGGGTTTAGCAGTGCTAAACCCCTACTCCACGGTTGATTTATCGGCAAAAATAGAATTAATTGCAGCCTGAAATAAGGTATTTTGGTGAACGCATATCACGATTGATTTGTACAATGCGTAAATCCTAAATTAGTAAGTAAAATTGTAATTGGAAAATCAAAAATGATTCGTTTAGTTTTTGTTTTTGCTGTTATTTATTTATCTTTTTCTTGTTCAGCATTACTAGAAGAAGAAAAAACTCAAGAAGTGCGAATATATTGCACTAAAGACACTTTTTCCACAGTTAGCATTACCTGGAAGAGTAATCACGTAAAGCACAATAGTTTTGTGAACAACAATTGTTTCCTGAAAACTCCCTTCTATGTTGCGAAATACTTAGTTTTTAATAGCTTAAAATCTACCCAAGAAGAAGTTATTACAGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCCACCGATTGGGTTAATTCGGAATAATTGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-2.40,-3.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.37 Confidence: LOW] # Array family : NA //