Array 1 2172962-2173172 **** Predicted by CRISPRDetect 2.4 *** >NC_021663.1 Corynebacterium terpenotabidum Y-11, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2172962 28 82.1 33 AT.C..T..........G.......... GCAATACTGTAAACCTGACACATTTGTGTCAGG 2173023 28 89.3 33 ...CGT...................... CTTTCTGCGTTGCTTTCTGCACCTTTCTGCACC 2173084 28 100.0 33 ............................ TGGCTACCACCCGAAAGCCCAGCACCGTCGAGG 2173145 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 4 28 92.8 33 CCCTCACCCGCGCCCGCAAGGGGCGACC # Left flank : TGGTCTTTTCCGTGGCAATCCGGAAAGGCTGCCGAGGTGCCGACTGAGCAAGCGGCACCTTTACCACTTGCCCGTTAAGTGTTGCCCTGATACCATTCGCCCGGACGGCAACACTTAGGAGCAGCGATGAGTAGAGGCCCGGGAAACTGGCAGCGACGGATACTCGATGCCCTCGACACCATGGGGCCGGAACACGTGTATCTAGTCCCCGATCTCGTCCGAGACAACGTCCCAAACCCCACCCGATCCGACCATGTTTCGGCACGCCGCGCAGTCCGGCGACTGTCGGAGGACGGGAGAATCCTTGCCGGACGTTTCGCACTGGACGGTAGGGCAACTGCTTTAGGCTTCACCCGGCCCGATTCCGAGGTTCGGGCTAACGTCTCGTGGGGTGCGAATCTAACTCCGGTGTGGCACTCGTCTGTGCCGGAGGGGATGCCGTGGCAGTCGTGGGATCCGCAGTGCACGGGCGACCGGCAAAAGGTGTCAGCTTTGACACC # Right flank : CCCTACACCGGGGGCGCCTTCCACTCAATCTGGATCTTCGACGGATCGAACCGAGGTCCACGACCAGCCGGAAGAATCGTCACAGTGACCAAAGCGTCAATCACCTGCGCCCGCTTATCCGCCGACATTGCCGCCCACCGGTCCCGCAACTCATCCCCCGACAACAGAAGATCCGCAACCGGGGACACCGTGCGCGCTGCCGTGATCCGCTTATCCAACCGGTCAATGTCCTGTTTGAACTGAGCTGAACCGGACGCCAGGACAGCCGCGTCTATCGTCCCGGAGGCGTACAGAGCGCCTAGCTCGTTCTTGCGTGCTGTGAGCGCGTTACGTTCGCTTAGAAGCGCTGCCACGTCCTCCCCTGCTGTGGTGTCGCGGTTTGCTGCCATGAGCCTGTTTTCGGGCATGTCGAGCACACCGAGGATCACCGCATCCACCAGCTCGTCCACGCAGATCTGATCCCGCGAGAGACTACGGCAGTCACGGCACAGGTACGCCTT # Questionable array : NO Score: 2.50 # Score Detail : 1:0, 2:0, 3:0, 4:0.64, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCCTCACCCGCGCCCGCAAGGGGCGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.70,-4.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-38.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.74,0.41 Confidence: LOW] # Array family : NA // Array 2 2685111-2681176 **** Predicted by CRISPRDetect 2.4 *** >NC_021663.1 Corynebacterium terpenotabidum Y-11, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2685110 29 100.0 32 ............................. TGGAGAAAGCCGCCCGGTTCGGTGAGGTGGAC 2685049 29 100.0 32 ............................. CGGTGCGGCCTGCTCTGCCATTGTCTGCACCG 2684988 29 100.0 32 ............................. GCCGCGGTCAACTCCTCCCAGGCGGCCTTGAT 2684927 29 100.0 32 ............................. TGGAACGCGGCGACGATGAAGTCGATGACCGG 2684866 29 100.0 32 ............................. CGCAGTGTCGGCGGTGTGGGACTTCCTGCAGG 2684805 29 100.0 32 ............................. AGTGCCTTGACGACAGCCCAGATCGACTGGAA 2684744 29 100.0 32 ............................. GAGGTCGTCACGCCCAGTACCCCGGACATGAC 2684683 29 100.0 32 ............................. TTCGACCGTCCGACGACGCTCACACTCGGGGT 2684622 29 100.0 32 ............................. GCGGCGACGGTCTCGGAGTTCGCCGTGTCGTC 2684561 29 100.0 32 ............................. ACGTCACCTGAAGGCACGGGCCAATTCGCGCG 2684500 29 96.6 32 ............................T TACTACATCACTGGGGAGCAGTCATGACCGAG 2684439 29 100.0 32 ............................. CGCCCCCCCCCGCACTGGCCGCGAGGCGCACT 2684378 29 100.0 32 ............................. GCCTGCCACGACCGCGTGGAGGAGCAGCTTGT 2684317 29 100.0 32 ............................. CACGATGTCCCGAGGAGGACTGCATGATGTTT 2684256 29 100.0 32 ............................. TCGTCCTCAAGTACCTTCATGAAAGGGATTAG 2684195 29 100.0 32 ............................. GCCGGGCGGCGAACGTCGCGACCCGCGCCCGA 2684134 29 100.0 32 ............................. TGATCGCCGACGAGCGCGCCAACCCCCGCGAT 2684073 29 100.0 32 ............................. GCCGCCATGAGCGGCACCACCACCACATCTAA 2684012 29 100.0 32 ............................. ACGACCCACGATCAGTAAACGGCAGAAGAAGA 2683951 29 100.0 32 ............................. CGCCAATCAGCACGCTGGATCGGCAGAGTGAT 2683890 29 100.0 32 ............................. CGTCACGGTGTCGAATCCGACGGATGTGCCGT 2683829 29 100.0 32 ............................. GTCTTCGTCGCCGGGTGGGATTTCGTGTCTGA 2683768 29 100.0 33 ............................. CCCTTTGACGATAGCGCCGATCTCAGGCTTCAG 2683706 29 100.0 32 ............................. GGTTCCTGGGTGGTCATGCCGCCACCCAGCCG 2683645 29 96.6 32 ............................G GGGAAGGCCACGAAGTTCTCGTTCGAGGATGT 2683584 29 96.6 32 ............................G CGCGGGCGGGGTGCGGATGGGTCGGGGGAGTC 2683523 29 100.0 32 ............................. TTCGCCATGACCATCGGATGCCCCGCGCGCGC 2683462 29 100.0 32 ............................. CCGTGTGGTCTTCGGTGAGACGCTGTACCGAA 2683401 29 100.0 32 ............................. GTTCGAATCTGACAAGGACGCCCCGCGCCGGG 2683340 29 100.0 32 ............................. TTCACCACCACCATCGCCCCCTGGTTCGGCGA 2683279 29 100.0 32 ............................. CTCCGTTGTTGAACAGTGGCGTGGTCATGGGG 2683218 29 100.0 32 ............................. TCCTTGATCGCGTCGCCGACCTTGTCCATCTC 2683157 29 100.0 32 ............................. AGGGCGCAGATAGCAGCAATGACATACCACTT 2683096 29 96.6 32 ............................G GACGGCCTGAGCCAGTAGGGCCTTACCCGTGA 2683035 29 100.0 32 ............................. TGACCTGCGACGAAGCAAGGAATGCTACTGCA 2682974 29 100.0 32 ............................. GTGGCTGCCGCAACGGACCGTGTGTACCAGAT 2682913 29 100.0 32 ............................. TGAACACCGGTAGCGGAGAGGTGCTGAAAGTC 2682852 29 100.0 32 ............................. AAGAAGTACACGACGGACCCGCAGGGGATGCT 2682791 29 100.0 32 ............................. CAGACACCGGGTGCAACACCGGGTGCCGGCGA 2682730 29 96.6 33 ............................A GGGCGACCACGCACACCGACCGTCACCGACACT 2682668 29 96.6 32 ............................G GCTGTGTACGCGGCGGGGGTAGCGCCGGTGGA 2682607 29 100.0 32 ............................. AGCATTTACCGGCGGGCTGTCGCCGGTCGGAC 2682546 29 96.6 32 ............................G GACAAGACCTCCGAGATCTGGGAGGCGATCAC 2682485 29 100.0 32 ............................. CCGGGAATGTGGGGCAGGAAGGCCGATGAAGC 2682424 29 100.0 32 ............................. TGAAAGTCTCGGTGACCGGTTTCCCCGCCTCG 2682363 29 100.0 32 ............................. AGATCGACACAATTATCACCTCCCCCCTGCTG 2682302 29 100.0 32 ............................. TACCTCGACCGCCAGCTGGTGTCGATCCGAAT 2682241 29 100.0 32 ............................. GTCCGTCACCCGTCGGCTGGTCTCCGGCCGCC 2682180 29 100.0 32 ............................. TTCACGCGGGGCTGCGGAGGATCAAGGACCAG 2682119 29 96.6 32 ............................G GCGGTGACTGCGAATACCGGTGAGCCGTTGTA 2682058 29 100.0 32 ............................. TGCGCTTTTCCTCCGGGGAGGGGCCACCGGCG 2681997 29 100.0 32 ............................. CAGACCAACGCGGTGAAGGCGGGGATTGAACG 2681936 29 100.0 32 ............................. CCGATCCACCGCTTCGCATCCTGCGGCGCGAG 2681875 29 100.0 32 ............................. CGTCCTCAAAGATGAGCACCCACCCGCCAAAG 2681814 29 96.6 32 ............................G TTGACGATGATGGAGGGGGTGGCTGTGGCTGC 2681753 29 100.0 32 ............................. ACCGACAACGTCGCCTGCATCGACAGCGACAA 2681692 29 96.6 32 ............................G GTCACACCGATTGGTAGACCCGGTACCCCTTG 2681631 29 100.0 32 ............................. ACATGTGAACCACCCCCTCAGTGAGCGACAGG 2681570 29 100.0 32 ............................. ATTGGGAGTAGGAATGACTGACGTGAGGCTTG 2681509 29 100.0 32 ............................. AGCATCCAGCACTCATGCTCCACAGCAAACGG 2681448 29 100.0 32 ............................. CTGTCCGCCGCCGAACTGGCCGAGGAACTGTC 2681387 29 100.0 32 ............................. AGCGCGTCCCGGCCCTCATTCTTCCACTCATA 2681326 29 93.1 32 ............T.........G...... AGGGCGGGGAGACCCACGAAGTTTCCCTGGAG 2681265 29 100.0 32 ............................. TTCGCCACCATGTCGATGAGGTTCGCCACCCC 2681204 29 86.2 0 ......T.....T..T............G | ========== ====== ====== ====== ============================= ================================= ================== 65 29 99.2 32 GTGCTCCCCGCGCGAGCGGGGATGATCCC # Left flank : GTACCGCGAGGATAAGGCGCACTTCGCGTGGACTCCGCGGAACACCTACTACCCCGACTTCGTCGTGTGTGACACGGACGGAGAACTGTGGATCGTCGAGGGAAAGTCCAACCGTGACGCGAACAACGACGAGGTCATGCAAAAGCGCGCGGCCGCCGAGAAGGTCATGCGCACGCTGACCGCGGATGATCGGTTCGACACCGTTCGCTGGGGTTATCTGCTGGCCACTGAGTCCGACATCGCCGCGTCGGATAGTTGGGACGAATTGAAGCAGCGGACGGGCTTCGTTCAGTCGTAGGCCGCCGCCGGCCGGTGCGCTCGACGGCCACCCGAAGGGTGCCCCCGCCTCCCCTTAGCCCGGTAGCCTCACGCGCGCCGATCCCCCAGGGGATTTTCCCCGCACCGCGAGGGGATCGGGTTCCCCGGACGTCGGACCTGCGGCAGGTCACGGGGTTTTCCGAAAGCCCCTGTGGACCCGCAGCTTCCCATCCGAGGCGTAC # Right flank : CTCGCGGAGAAGTCGATCACCGGCGTTTTCTACAATTCGCGCGCCAAGCAGCAGCGTGGACATGAACAGTCATACTCGTGGATCAGACGAGTCATCCTCCGGTATGCCACCCGGCCCATCACGCAACGAAACATCGAGAGGCAACCACCACTCATCAAAGGAGGGCATCATGATCATGACCCTCGCCGCAGTCACCGCCGAAGACGGCGGCACGACCAGCAGGTGGGGCATCGTGCTCACCCTCTTCCTGACCGTTCTGGCGCTGGCCCTCCTCGCGTTCATCATCGCGGCGCTGGTGAGCATCATCAAGGCCGGCTCGCTGACCGCCGCCGGAAAGATTCTCTGGGTCGTTGTCGTGTTCGCGTTCCCGCTGCTCGGGTCTCTCGTCTGGTTTATCTGGGGGCGCAGCGCGCAGCTTCAGCGACTTACTTTGTAGGGCTGCGTCCTCCCCGCAGTTCGCTGTGGGGTGACCGGAGCGCTCCGAGCAAGCAAGAGGGCCC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-35.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 2695328-2693590 **** Predicted by CRISPRDetect 2.4 *** >NC_021663.1 Corynebacterium terpenotabidum Y-11, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2695327 29 100.0 32 ............................. AGTGACTCAACCGGATCATCAAGATCCATATC 2695266 29 100.0 32 ............................. CGCGCTCACAGCATCCTGCTGAACAAGCATCG 2695205 29 96.6 32 ............................G GCGCTCGAAAACGAGGCGAAGGCTAACGCCGA 2695144 29 96.6 32 ............................G GCAACCACGGATCAGTTGGTTGCGGCGGAGGA 2695083 29 100.0 32 ............................. GGTCAGCTCACGTCACCGCGTGAGGCTATCGC 2695022 29 100.0 32 ............................. CGGAGCGTTCCCGTACCGGCCCCCCGGTCCCA 2694961 29 100.0 32 ............................. TCCACCGTCCGAGGAGGACGGCTAGAATCTAA 2694900 29 96.6 32 ............................G GATGACGACACGGCGAACTCCGAGACCGTCAC 2694839 29 100.0 32 ............................. GGTTCTGTTACTTCCCCGCAGATCGTCCTTCC 2694778 29 96.6 33 ............................G GCGACCATGCACGACCTGAGGCACTACTACGCG 2694716 29 96.6 32 ............................G GAGGACGCGTGGGTCCGGCAGATTCAGTCGGA 2694655 29 96.6 32 ............................G GTAACCCCCGAGATGAATACCGCAGACCCCCG 2694594 29 100.0 32 ............................. GACAGACCGTTCGGCGCGGACTGCCGGCGGAC 2694533 29 100.0 32 ............................. GAGAGGCGGGACTTCGGGGCGGTTACTTCAAT 2694472 29 100.0 32 ............................. ATTCCTCATGCCGGGCACGCTACCCGTCGCAC 2694411 29 96.6 32 ............................G GGGAGAACGATCACGCCCCGGCGCAACAGGGG 2694350 29 100.0 32 ............................. GGCGAATGAGCGACGACACGATCCGAGCGCTG 2694289 29 96.6 32 ............................G CCGCCCGAGCCGGTCAGACAGTCGCTTCTGCT 2694228 29 100.0 32 ............................. CCGGGACTCGACTGGGCGACGATGCTGGCCGT 2694167 29 96.6 32 ............................G TCGTCGAACGTCAGATCGTTGAGACCTTCTTC 2694106 29 96.6 32 ............................G GTAGTGCGCGGCGCGTAGGGCGAGCGCCGAGG 2694045 29 96.6 32 ............................G GCTTCTGGTTGCCGATCGGGTAGTTCCACTGG 2693984 29 96.6 32 ............................G TACATGCCGACGATCACGATAGGAGACAAGAC 2693923 29 100.0 32 ............................. GGAGAAGCGGCGCCGAGGTGAACCCTCGACGC 2693862 29 100.0 32 ............................. CAAGGCGCTAGACGCGCTACCAACACCGTCCT 2693801 29 100.0 32 ............................. TGGTGGCTCGACGATCACGTCGGCTACGACAT 2693740 29 96.6 32 ............................G GGGTCGAACTCCACGGCGACTCAGGAGGACGT 2693679 29 100.0 32 ............................. GCTGCTAAGGACATGGGTACGGTCAACGGTGT 2693618 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================= ================== 29 29 98.4 32 GTGCTCCCCGCGCGAGCGGGGATGATCCC # Left flank : GTGGGCGGACGTCGTCCATCTCTGGGATGACCGGAACCGGCAGGTAGTCGGGGGCATTAACTATGAGGAGGATCCCCCAATGGATGAAGAAGGGCGGATTGAGCCGTGATGACGTTGGTGCTGTCTGCGGCGCCTGCAAAGCTACGTGGTCATCTCACCAGGTGGCTGATGGAGGTGAGCGCTGGTGTGTACGTGGGGCGGGTCACTGCTCGTGTGCGTGATGAGCTGTGGCTCCTTGTGGTTAGCGAGATGGATTCAGGGCGAGCTGTTCTGACGTACCCGGCGGCGACGAATGAACAAAGGTTCGTTGTGAAAGTACATCGCGCTGACTGGGTGCCGACGGACTTCGAAGGTCTGACGTTGATGAAACGTCCGGTAACGACTGAAAAGGGAGCGCTGAAGGCAGGGTGGTCCAGGGCATCACGTATGCGCAAGGCAGCTCGTCGGCGTAAGTGATGTAAGTTCTACTCATGGGATCGTAAACATGCTGTTCAGGTAGC # Right flank : TGTGGGGGGGTTTCGGACTATCGACCTCGATTGTTCGGAAAACCCCGGCACAAAGAACGCCGCCCACCTCCCCCACCGGGAGATGGGCGGTTTCTGCTTTTGGGACACCGTTTTCGCGCCCCGCCGGCCGGTTCCGCGCCGCATAATCGGCCCGAAAACGCGGCCCCGGAAGCACCCGTAGACCGTGCCCGAAACGGGGACGGTCAAATCTTCATTTACGCTGCCAGCGGCGGTGCGTTGGGCACCGCAGCGGCCTCATCGAGCCCGCTTTCGTGGCGCGGTGTCGGCGACGGCGGAACCGGCGCACCGCCTGTTGTCCCACCCCGTCCGATGAACCGGGCGATGAGCGCGACGTTGACGGCGACGACGCCGAGGGTGACGAACAGCGCGGCGGCGGTGAACCCGCGGATCATCCGCCGGGTGGTGTCGCCGAGGCCGGCACCCGCGCCGGTCTTGAGGATCGCGTTGCGCGACTCGATGGTCGCCCGCGGCGGCTGGTA # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.80, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGCGAGCGGGGATGATCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGCGAGCGGGGATGATCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //