Array 1 170639-167489 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHPLS010000008.1 Burkholderia gladioli strain AU42016 NODE_8_length_241095_cov_22.237251, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 170638 28 100.0 32 ............................ GTCGAGCGCGCCGAGCGCATCGGCCAGCGGCG 170578 28 100.0 32 ............................ TTGTGGGTCAGCGCGTCGTAGTCGCGCTCGCA 170518 28 100.0 32 ............................ ACCGAACGGCACCGGCGATCAATGCCGAACGC 170458 28 100.0 32 ............................ GCGACGAAGCACTTGTATTCGCTGCCGACATC 170398 28 100.0 32 ............................ AGGTCGCGGATCGTGCCACCCGAATTGAAGCA 170338 28 100.0 32 ............................ ATCCAGAAGCCGTCAATCGAGCTATCGGAGTG 170278 28 100.0 32 ............................ AGAATCCAGCAGCGTTCTTGCACATGCCAGCT 170218 28 100.0 32 ............................ AGTTGCGCTGCCGTTGCAGCTCCTTGTATGGC 170158 28 100.0 32 ............................ ACCTTGGCACGCAGTCGCACGTCGGCCAGGAC 170098 28 100.0 32 ............................ TGCGGGGAGTAGGCCCCGTAGGCGTTAGCGGG 170038 28 100.0 32 ............................ ATCAGGATCGATCAGGCCGTCCGCACTGGCGC 169978 28 100.0 32 ............................ ATCACCGCCCCATGCACAGGTAGGAAACCACG 169918 28 100.0 32 ............................ GTTGTCCGTCGCGGCGAGCAGCGCCGCCCCGC 169858 28 100.0 32 ............................ GTGTCCGAGGCCGAGAAGGGCGCCGACCAACA 169798 28 100.0 32 ............................ ACAAAGGCCGATTCAAGCGCCGGAAGTGAAGA 169738 28 100.0 32 ............................ GCGCAGGCGGCGATCAATGGCGTGCTGACCAG 169678 28 100.0 32 ............................ TCAGCCGAATACTGCGCCGTCTGAGCGGCCAG 169618 28 100.0 33 ............................ ACCAGCCTGACGGTCGGTACCGTCATCGGCTAT 169557 28 100.0 32 ............................ TGCAACGGCAGGGCGATGAGGTCTATGTGCTG 169497 28 100.0 32 ............................ TGCTGAGGCCGCCGCACCGACCGAGGCGCGCG 169437 28 100.0 32 ............................ AACGAGAGCAGCAAGCCGGCCGACGGCGGCCC 169377 28 100.0 32 ............................ TTCAGGTCGAACTTGTCGGGGATGTCGGTCTC 169317 28 100.0 32 ............................ TGCAGGGCGTCCAGTTCCACGCGGCCGGCGAC 169257 28 100.0 32 ............................ TTCGCGGCGGCGATGGGGGTGTCACCTCCAAC 169197 28 100.0 32 ............................ TCTACGGTGCGTGGAACACGTTCGACCTCAAA 169137 28 100.0 32 ............................ CGACCAAGTGATGCAATACGGTTTCGGTATGC 169077 28 100.0 32 ............................ TCGGCCACGATCTTTCCGCTGGTTCCGGCTCG 169017 28 100.0 32 ............................ GCCGCCGCGAAACGCTGCTCGGCGCGTAACAG 168957 28 100.0 32 ............................ GTCAAACCTTCTTCGCCGCGGAAGCCGTCCAT 168897 28 100.0 32 ............................ GTATCGATGCCGCCCACGATCGACGAGGCCGC 168837 28 100.0 32 ............................ CGCGAGCAGCCGAACTGCCGAATCTGATCGAG 168777 28 100.0 32 ............................ ATGTAGACGTCGACCAGGCGCGGCATGTTGCC 168717 28 100.0 32 ............................ TCGAGCTGCTCACCGCGCGTCTCGGTGCCGAG 168657 28 100.0 32 ............................ TTCCGCTGGGGCCGCAACGTCGCCGCCATGCT 168597 28 100.0 32 ............................ TACAAGGCGCCCAACGGCGCGGTGTATCCGGT 168537 28 100.0 32 ............................ TGATCGAATGCAGCGAGAGCGGGATCGCACGC 168477 28 100.0 32 ............................ AAGACTACCAGCTGCAGCAGGATGGCCAGCCC 168417 28 100.0 32 ............................ CATCAGGCCGACGCACGCAGGTGCGACGATGA 168357 28 100.0 32 ............................ TGATCAGTCGCGGGCACAGTGGCGTTGACGGG 168297 28 100.0 32 ............................ ATGGCAGTCTGGATCGGCGTGCATCTGCCGCG 168237 28 100.0 32 ............................ CTCGCGATGGAGGTGGATCTTGAACGTAGCCT 168177 28 100.0 32 ............................ CTTGAGGGCGCGGATGCGTGCGGCTGCCTCGC 168117 28 100.0 32 ............................ TGATCGCCACCGGACACATCGCGCCTGGCGAC 168057 28 100.0 32 ............................ ACTCGACGCGCGAAGAAGCCATCACTGCCTGG 167997 28 100.0 32 ............................ CTTCTCACCTCCCCTCGAGCAGCAGTGCCGAT 167937 28 100.0 32 ............................ ATGACGAACAACACCACCGCAGCCGCCCTCAC 167877 28 100.0 32 ............................ ATGTTACACCTCAATGAAAAATCGCGGGCGAG 167817 28 100.0 32 ............................ AGAAATCGGCGTGGCCCGGCAGACGGTCGGTG 167757 28 92.9 32 ..........A.........T....... GATGAACGCCGCCACGCAAGCGCGTCACGGAT 167697 28 100.0 32 ............................ AAGGAATTCGCGGCCGGCTGGCTTGCGCGATG 167637 28 92.9 32 A................T.......... TTCCAAGTCCCATTCGCGTTCATCATCGGGGA 167577 28 96.4 32 ............A............... GCAGTCGAAGATCGGCAAATTCAAGTTCGACA 167517 28 92.9 0 .............C......T....... | A [167493] ========== ====== ====== ====== ============================ ================================= ================== 53 28 99.5 32 GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Left flank : ATGGTTTGCATTCGCTGATGGCGCAGTCCTGGCTGCAGGGGATGCGGGATCACGTGGCGATCGCGACGCTGGCGCCCGTGCCGGACGGCGCGATGCATCTGGTCGTGCGACGACGGCAGTTCAAGACCAACGCGGACCGTCTGCGGCGGCGACGGATGCAGCGCAAAGGGGAAACGGCCGAGCAGGCTGCCGCGCATATTCCCGATTCCGTCGAGCGTCGGCCCGATCTTCCGTATGTGCGTCTACGCAGCGCGAGCACGGGACAGGTGTTTTGCCTCTTTGTCGAGCAGGGGGGCGCGGTGAGCGAGCAGGTGCCTGGGGCGTTCAATGTCTATGGGCTGAGCCAGGGGGCGACGGTGCCCTGGTTTTAACCCTTTTCTTGGGCTGATTTGGTTGGCCTTTGAAATCAATGGGTTAGCGAGAGGGTGGAAATTTGGGTGGTTTGCCCTTTCGCGCGTGTTTGTTGTTTGGAAACAAGGGGTTGGAGGGGGAAGGGGATA # Right flank : CCGTGATATGAAAGGACGGTAGACCTGCAAGTTTTGTCGCGAACGCGGGTTGCATCCTCGCAGACTGGCTCGAATACCGAGTCGTCCGCGATGCGCGCATGTTCGCACCCGATCAGGACAACAGGCCGATGACATTCAATCGCAAGATGGCGCAGTGGACGGCAGCCGCATTGGCCGTCACCTGCCTGCAGGTGATCAACGCGAACGCACAGACCTTGAACATACCGCTCGGCACACCCGACGGATTCTCCGCATCATCGATCAAGAACGTGGGCCAGGACCGCTATTGCATCAGCGGCCGCGTGTACGACGACGCGGGGCCGAGCAACACGGCGATGGCCGTCCTGGTGGACGCCCGGCATCGTACCGTGTCGTGGAAGACCTCGATTCCGCATCCGCGCGACTACGCCGGCAACGCGGCCGTGGCCTGCGCGGCGAGCGGGGACGCCTACTATGTCGTCACGCAGGAAGACACCCAGGCTTCCGAATCGCAGAAGCAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGCTGCCGCGTAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCGCTGCCGCGTAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //