Array 1 11340-11006 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIJK02000051.1 Candidatus Chloroploca sp. M50-1 NODE_51_length_36784_cov_158.666776, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 11339 29 100.0 32 ............................. ATACATCTTAGCCCTCCAGGGTGTTGATGCTC 11278 29 100.0 32 ............................. ATGACGGGGTACGGCTCGCCCGTCTCGTAGTC 11217 29 100.0 32 ............................. ATGACGGGGTACGGCTCGCCCGTCTCGTAGTC 11156 29 100.0 32 ............................. TCGCTGAGCACCTAGGGGAACAGCGTGCCGGT 11095 29 96.6 32 G............................ AACACCGGGGCGGGCAACCTGTTTGTGATCTT 11034 29 96.6 0 G............................ | ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.9 32 ATTGTCCCCGCGCCTGCGGGGGTGAACCG # Left flank : GGAGTGACGTTCCAGTGACAACAGGCATCAATGGTCTCGACTCATGTTTTGCAACGATGCGGTTAGGCATCGGCGGATCGCTCTCCATCGAAATAGCGCTCGAGAATACCCGCAACATCGCCTTCTTTGCCTACCAGCGCCTCAGCAATGGCCCGCGCAGACGCATAGCGACACCTCACGATCATGATATGCAAAGTGTAAGCCTGGGGAGCCATTACGTCAATAGCTCTTTGCTGTCATTCTGGTCATAGTACACAGTATCGTTTTTTAGTGTGATTAATTACACAGAAAAGCTCAGGCAAAGCGCACTATGCTTCTCCGTTTCTCTGCTCCATATGGCTATGCACCCGCTGCGTGGTCATCGCGTAGGTGGGGCAGTCGGCGGTAGGGGATGTGCTGCCGCCCCTCGACGGTTCAGATCGACACCGCCCGAATGCGGAAAATGACTTCAGGGCTTGTTTTTATCGATGAATCGCATTAGAATGCCTTGCAAGGTAGTC # Right flank : TCGGTAGCATGGGGGCAACGTCAAGACGGCGCGTTGTCCCCTACTTGACTCGCGGCGGCGCAGCAACTACCATGGGCGCACGAAGCAATGCCGTGCGGAGTGCAACGAACGCAATGTCTGGCGACGAAACATCCCCTGGTGACTCCATCGACCCGCTAAAAGTCGGTGAGTTGATTTCCATAGCCGAGGCAGCGGACTACGCTGGTCTGGCGCGGCATTCATTGTTGACCTATGCCCGGCATGGTCGCCTCCGCGCCAAGAAGCTTGGGTCGCAATGGGTGACAACTCATGCGGCGGTTGATGCGTATCTGGCCTCACGTGATACCAAAAGTATCCCCAAGAAATATCGTCCACCCTCTTGACCGTATCCACTTTCTTGGATAATATAGAGCTATGAAATGACGCAACCGCCAGGTGCTGGTAACACCTGACGGCTGCTAACCTCACCACCTGGGATGAGCAGGCGGTGCGGCTGGGCTGCATGGTACCACACTGTGCGG # Questionable array : NO Score: 6.01 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGTCCCCGCGCCTGCGGGGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCTGCGGGGATGAACCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.00,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 20382-26483 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIJK02000070.1 Candidatus Chloroploca sp. M50-1 NODE_70_length_26562_cov_59.243483, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 20382 37 100.0 36 ..................................... CCTGGCACCGTCCATCCCGTTGGCGACGTCGTAGGC 20455 37 100.0 36 ..................................... ATGATCATATTCCCTCCCTATTCAATTGATCTCCCC 20528 37 100.0 37 ..................................... ATGGCTTCCCCAGCGTGGGTACTAGCCCCACCCGGTA 20602 37 100.0 36 ..................................... AAGCTCCGCGTCCTTCTTGCCGGCCCAGTTGGCCGG 20675 37 100.0 34 ..................................... CCAACCGAGCCTCGGCCTGGGCTTTGAGCTCTGC 20746 37 100.0 36 ..................................... AGTACACTACCCCCACCCAACTAACGATATCGCGTT 20819 37 100.0 38 ..................................... CCTGGTGGCGATGGAGTATCGCCAGAATAGCCAGTCGG 20894 37 100.0 35 ..................................... AATAAACGTTTCAAGTTCATTCCTGTTCATAAACA 20966 37 100.0 36 ..................................... GTGATCAGGGGACATCAGCCTCGGCGATGTACGCAA 21039 37 100.0 36 ..................................... ATGTTAGCACTCTCGCCGATCATGATGGCGGTGCGA 21112 37 100.0 37 ..................................... TGGTCTCGGCGACGATGGTGGTGGTGTTGATCTCGGT 21186 37 100.0 36 ..................................... CATCAGGCCCGCTTCGGTCCGAACAAACCATTTGAA 21259 37 100.0 35 ..................................... CCGGCGTGTTGCGGGTTTCGGCCGCGGCAGACCGG 21331 37 100.0 38 ..................................... ACACTTCCTGCCACCCCACACCGGGGCGGCAGACATCG 21406 37 100.0 35 ..................................... GCCCAGCCCGCGCCCAACGCCTGTCCGCTCGACGT 21478 37 100.0 37 ..................................... ACGCTGATGCCCTGAGCCTGCGTGGGCATGGCCCACC 21552 37 100.0 36 ..................................... AATTCGTCCACTTCCTTGATCTCGGGAAGTGTTCTG 21625 37 100.0 38 ..................................... TGCAGTCGGAGGAACCGATCAAATTCAGTTCACGATTA 21700 37 100.0 36 ..................................... AAGTCCCCGCGCTGAGGGTAGTCACCTTGCCGACCA 21773 37 100.0 37 ..................................... GAGCTTGTGTACGATTCGACCAATCCGTCGGGCACGG 21847 37 100.0 36 ..................................... TATAGTGAGGGCGCGCCCAACGCTGAGCTTTCGCTC 21920 37 100.0 36 ..................................... TGCATGTTCTCTGCTCAACCGAGGAGGTGGTGAGAG 21993 37 100.0 38 ..................................... ACTGCCAATTATCGCTCCATGTTCCCACGTTGACCCAC 22068 37 100.0 34 ..................................... CTTTCTGTCTGCGATCCCTGGGGGGGGGGTAGTA 22139 37 100.0 37 ..................................... GTGGCGCGGATTTCGCTTGCAGCCGCGCGCTCAGCGG 22213 37 100.0 36 ..................................... TTTTTGTCTCTCTCTCCGCCCCGCGCTCGCTTTGGG 22286 37 100.0 36 ..................................... CCGACAGGTTGAGGCCAGCGCTGGGCACGGTGCCGT 22359 37 100.0 36 ..................................... TTAGCGGGCGTGGGTGGGCGGGTGCTACTTGGTCTT 22432 37 100.0 37 ..................................... AGCGAGAGTTCTCCTAAGACTTAAAGACTGTCAGAAG 22506 37 100.0 36 ..................................... GGTCAGGACATTGAGGCCGATCTGCTGGCTCTTGCG 22579 37 100.0 36 ..................................... TTTTTGTCTCTCTCTCCGCCCCGCGCTCGCTTTGGG 22652 37 100.0 36 ..................................... TGGGTGACCCTGAATGGGCCACCAGAACCCAATCGT 22725 37 100.0 36 ..................................... GGCGACTGCCCCATGATTCAACAACGCCACCACGAA 22798 37 97.3 33 T.................................... TTCCGGGTGCGATCGATCCCCGGAAAGGGTAGA 22868 37 97.3 38 T.................................... TCGATTGCCGACTGCGTTGGCTTCGCCGCTAGGGGAAG 22943 37 97.3 36 T.................................... TTGCCGAGCACCGTCAGCCAGTTGCGCTGGCGGTGC 23016 37 97.3 35 T.................................... TACACATCAGGAGTGACCTGGAGAAGGTTAGTATC 23088 37 100.0 35 ..................................... CTAGCGTCAATACTCAAGCTAACTTTGGCCACAGG 23160 37 100.0 36 ..................................... TCCGACTCTCCTTGCCACTGCTTTCGCCATGTTTAC 23233 37 100.0 36 ..................................... TCAATCACTTCCCAGTTATCATCAGACACGACTTTG 23306 37 100.0 36 ..................................... CAGAACTAAACGTGACATGGTTGACTCCGTATATCT 23379 37 100.0 36 ..................................... AATAAAGGCGCCAAGTAGGCTCCAATCGAACTCCTC 23452 37 100.0 36 ..................................... GATACAGTAACCAGAACTAAACGTGACATGGTTGAC 23525 37 100.0 35 ..................................... TCTGAGGATCAGCGGTCACCGAGTCGGGAACCAGG 23597 37 100.0 36 ..................................... GAGCCGGTGAAGTTCGTCGTGTTGATCTCGAGCCTG 23670 37 100.0 38 ..................................... CTCTGGAAGTACTTGATCGACAGCAACGACATCGGCCG 23745 37 100.0 36 ..................................... ATTAACCTTGCTCTCCTGGCCGGCGCTGCTGGGGTG 23818 37 100.0 37 ..................................... GTCCCAGAGGGGCGGGTCTCTTCAACAGAGAATGCAA 23892 37 100.0 38 ..................................... CCCTTGGGCATTGTTGAAAGCCCAATCGGCTGCGGTTT 23967 37 100.0 37 ..................................... CGACCATAGTCGTATACTCATCAACACTCATGATAAC 24041 37 100.0 36 ..................................... ACGCGTTGGGCGCCACCCAGAGGTCCAAGGGACCCC 24114 37 100.0 34 ..................................... GCGGTCGGGCTGGCGGTCGGGCTGGCCGTTGCGG 24185 37 100.0 37 ..................................... GCGTTGGGCGCCACCCAGAGGTCCAAGGGACCCTGGG 24259 37 100.0 35 ..................................... TGTTCGTCGAGGTCGCGCTCGAGCGTGGCTCGATC 24331 37 100.0 37 ..................................... CCTCTTCGGCCCGCTGGGCGATCATGGCGGGCGTGAC 24405 37 100.0 36 ..................................... TAGGCCAGGTCGCCTACGAAGCGCAGAACAATAACC 24478 37 100.0 36 ..................................... AACTCTACCCACCTCATACTGCCCCCACAATGGGGG 24551 37 100.0 31 ..................................... TTGACCAGTGCGGTGAGCAATTTGGTAAAGT 24619 37 100.0 35 ..................................... CCTTAGGTCGAGGTTTGTAGCTAAGGGGTTTTACC 24691 37 100.0 38 ..................................... GGGCGGGGTGGCGGTCGGGACCGCGGTGGCCGTGGGTG 24766 37 100.0 35 ..................................... TCGAAGGGCTTCTCGGGCTTGTCCTGCAGATTCTC 24838 37 100.0 36 ..................................... GTAGGCCTTCTCAAGCAAGGTCATGACGGGCTGGGC 24911 37 100.0 37 ..................................... TTGTTCATGGTCTCGGTCTCGATGGTCTCGGCGGTCT 24985 37 100.0 37 ..................................... AATGCTTTATCAGCTTGATGGCTGCCTCTACAACGGT 25059 37 100.0 37 ..................................... CAGCAGGTAGACGATCAGGGCGAACAGGCCGGTGATC 25133 37 100.0 32 ..................................... CTTAATGCCGTTCACGATGAAGCCACCCCCGA 25202 37 100.0 39 ..................................... TTGCGCAGCAGGTAGACGATCAGGGCGAACAGGCCGGTG 25278 37 100.0 37 ..................................... GCGGTCGGGCTCGGCTCGGCGGTCGGCGTGGCGCTGG 25352 37 100.0 36 ..................................... AGAGCTGTGATTTGCCAGCCCCACAAACCACACCCG 25425 37 100.0 36 ..................................... GAGGACCCCCAACTTTTTCCTGGCCATCGAAGATGA 25498 37 100.0 36 ..................................... GATCTTACCACTGGGCACGCAGAAGTGGGTCTGCTC 25571 37 100.0 34 ..................................... AAACCTGGATAGGCCCCTGCGCCCGGGCGGGCAG 25642 37 100.0 36 ..................................... AATCCCCTGCGCCTTCAGCTGTGCCAGCGACTCGAC 25715 37 100.0 38 ..................................... CAACCCTGCGCCGCCGCGGGGGCGGCGGGCAGGATCGA 25790 37 100.0 37 ..................................... TCGGCTCGGGCGTGGTCGTCGGCGGGACGGTCGGCTC 25864 37 100.0 38 ..................................... AATGCGGTAGTGGTACTGCGCAAGAAATAGGTGTACCT 25939 37 100.0 35 ..................................... TTGTTGCCGACGATCACCAGGTGCTGCTCGATAGA 26011 37 100.0 35 ..................................... GTGGCCGCGGTGGCCGTGGCGGTGGGCGGGACGGC 26083 37 100.0 37 ..................................... GCGAAGTCCCAGTTCGCAGCGGATGGGACGTACTCCG 26157 37 100.0 36 ..................................... AAGTAGTCGCGGCAAAGCGTGCACCATCCATCGGAA 26230 37 100.0 34 ..................................... GTGCACCATCCATCGGAAATCTCCATTTTCACTC 26301 37 100.0 36 ..................................... CTGTCATAGGCTTTCATAGCTAGATAATGACGCGAC 26374 37 100.0 36 ..................................... ATGACGGTCTCGACCAGGACCGGGGGGTTGCCCCGG 26447 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================= ================== 84 37 99.9 36 GACACAAAAAAAGCCCCGCTTTGAAGGGGTTTGAAAC # Left flank : CAACAACCATCCTGCCAGCACAAACAACTCGGCCAATGAACGAGGTTTCCGATCCTGACGGAGTGCAGCGAGCGAGCGAAGAGGGCCATACCGTGACGTCACTGCCTGCATCGACAACGTACGTGGCTCGGCCCGGAGCGTCTGAGCGGCAGCCTGCGCCTCAGCAGATAACGAAAAATAGACCGCACGCACCGACGCAGGGCGACACAGTGCCCGTCGGACGCGAAGCAAACACTCATCACGCGAGCCACGGCGCGACAACGACACCCGCTGCGATGCCGCAATGAGTCGTAACAGTGCCACCGGAACATCTGCCAGATACGAAACCCAGGCTTGCATCTTGCACTCCAACCAGTCACCTGCTAAAATGTAGCCAGAGCAAGTATACACCCTGCAGGATACCACATGAATAACATTGCATACAGTTTCACCTGCTCCTGGTTGCACGTCAAATGACGCACTGCAATCAACTCTATCGCCCCAGCCCGGGACGCGACCCA # Right flank : TCTAGGCCGCCCCGGGTCTCCCAGTTGTTAAATGTCAACTAGATTTGCCGCCTGGTGTCAACTAGATTTGCCGGTTCCC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACACAAAAAAAGCCCCGCTTTGAAGGGGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [40.0-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 277-464 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIJK02000125.1 Candidatus Chloroploca sp. M50-1 NODE_125_length_5317_cov_55.797225, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ============================ ================== 277 26 100.0 28 .......................... CCAACTCCTTCGGCACCCGTCATCACCA 331 26 100.0 28 .......................... GCGACTCCTTCTGTGATCGTAATCACTC 385 26 100.0 28 .......................... GCGACTCCTTCTGTGATCGTAATCACTC 439 26 88.5 0 ..............G.......C.C. | ========== ====== ====== ====== ========================== ============================ ================== 4 26 97.1 28 TGCCCACCGAGGATATCGTGCCAAGC # Left flank : CGACGCCCACTGAGGTCCCGCCCGACCCCACTGAAGTGCCGACCCCAACCGAGGTGCCACCGGATCCTACCGAAGTGCCGACGCCCACTGAGGTCCCGCCCGACCCCACTGAAGTGCCGACGCCCACTGAGGTCCCGCCCGACCCCACTGAAGTGCCGACGCCCACTGAGGTCCCGCCCGACCCCACGGAGGAGCCAACCCCAAGCCAAACTCCGACCGCCGATCCATCCTCGACGGCTACGGCAAGCCCAACCCCCTCGGCGACCGTCATCACCAT # Right flank : CGAAGAGGCCATCCCAACGATCCTATTACCTATCACCAATGTCCCGGCGACATCAACGCCGCAAGCAACGCCAACCCTTGCCACAGGATGGCAACCAACCGCCGAAACCTTGCCAACGTCTGGCACAGGCCCAGGTGATCCCGAAATCTCGGTCATCTTGCCCCACGCCGGTCTTGCGCACACAACCCCTGGCAACCCAGGCCTCTATGCGCTTGCGTTGAGTCTCATCGTGATCGGAGCAGTGCTACGGTGGCGACGCTAATCCACACACAGAGACGTCTCGGCCTGCACCGCACCCTGCTTGGGTTGCTCGTTGTGCTGCTGGTCAGCCTGAATCTCCCAGGAGCAACCACGAGCCAGACGATCGTTCAATCACCCACGACGACTGAAGCCCTGGTCATCACGGTGAGCGCAGGGGGTATGCAGCACCTGACCGGGGCTACCTTGCTGGCAGCAGGCCTCGATCCTGCCGTTGATCCAGCCCAACTCTGGCTTCATCA # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TGCCCACCGAGGATATCGTGCCAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-1.30,-1.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [31.7-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 1 19-3278 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIJK02000107.1 Candidatus Chloroploca sp. M50-1 NODE_107_length_8175_cov_68.957266, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 19 37 100.0 36 ..................................... GAACTTAAGTTCAGCGTTGAACTTCAGTGATGTCAG 92 37 100.0 37 ..................................... ATTTCTATGGGGATCAATAGCCACCATGTGGTGGCTA 166 37 100.0 37 ..................................... GATGAGCAAGATTATCAGCAGGGCACCGGCGGCGATC 240 37 100.0 39 ..................................... ACCTCTTTTAGACCTGTCTCTACGTGTATAATGGACCGT 316 37 100.0 35 ..................................... CAGACTGCGACTTGTCGGTCTGCTGCCCCAGCCTG 388 37 100.0 37 ..................................... AGCGTGTGGAGCCGCTGGGGCTCTTGATTATTGGAGG 462 37 100.0 38 ..................................... GATGAGCATGGCTCACCACCCGCCCATGAGCCATGGGC 537 37 100.0 37 ..................................... TAGATGGCGGCGGTCGCGACGAGGGCGATGTCCTGAA 611 37 100.0 36 ..................................... GAGAGGAATGGGTTCTTAAGACCGCGTCGAACATTG 684 37 100.0 36 ..................................... GATGATCTCGTCAAGTCTTTCGGCTTGGTCTAGGAG 757 37 100.0 36 ..................................... ATTACATCTTTGACGGTCTTGTGACCTCTACCCTGT 830 37 100.0 36 ..................................... GCTGATCTCGACGTTGCCGGCATGTGCGGGTTGGGC 903 37 100.0 34 ..................................... AACCTTCAGACCATCGCCGGAGTGCCGAACGATT 974 37 100.0 36 ..................................... AAGGGGTTGGTCGATGACGATTTGCCCATCGAGACC 1047 37 100.0 36 ..................................... GATAATGCTGAGCGTGATTGTACCGATCGACCATAC 1120 37 100.0 36 ..................................... GACTTGCCCCGTGTCTGTCTCGGGGGCGCTCAGGAA 1193 37 100.0 36 ..................................... GATAATGCTGAGCGTGATTGTACCGATCGACCATAC 1266 37 100.0 36 ..................................... CACACGGTAGGTGTGGCCGACGGACGGGGCAAAGCC 1339 37 100.0 36 ..................................... GCGAGCGGGTTGTTCCACCGCAGGTAGGCGGGACCG 1412 37 100.0 35 ..................................... GCAGCTGGTTGACCTTGCCGTAGTCGAACGTGACA 1484 37 100.0 36 ..................................... GTCGCGGTGGCATAGCCAACCGCGATCAGTGACAGA 1557 37 100.0 36 ..................................... GCGGCGTTAGCCGTGCCGCCGCCATGTGATCTAGGG 1630 37 100.0 34 ..................................... TTTAGCAGCTCAATCAACGAAAGTGCCGCGATAA 1701 37 100.0 34 ..................................... CTGGCCGAGCCCGCGAAGATCGAACGCGCCGCGA 1772 37 100.0 37 ..................................... ATTTGGTCGCCGTCGCCGTCGCCGTCGCCGTGCTCGT 1846 37 100.0 38 ..................................... TGCTGAAGGATACCAAACCTTAGTACCTGTAATCCTTA 1921 37 100.0 37 ..................................... GCCGTGGTGGGGAGCCGCCCGCAGAGCACGTCACGTG 1995 37 100.0 36 ..................................... GGGATGCTACCGGTGATGGGCAAAGCCCTCACCGCT 2068 37 100.0 36 ..................................... AGTGCGCGTCGGCGGCACCGTGGTGCGCGTCGGCGT 2141 37 100.0 36 ..................................... AAAAAGCTGCCTGTACCCTTGTTCCCGGCCAGGGAA 2214 37 100.0 34 ..................................... GGTTTTTAAGATCCTCCTCAGCGCAGATGCCCCC 2285 37 100.0 36 ..................................... CTTGGGGGCCTTCTCCACCCACTCGTCCACCTTGGC 2358 37 100.0 37 ..................................... GTTCTGGCTCCAGCTGAACGGGATGTCACACCCGCTC 2432 37 100.0 39 ..................................... ACCGCCGCGCCGCCCACCCAACCTTAGTGGTGGGGGCGC 2508 37 100.0 36 ..................................... TCGACCCGGGTGGTCTGCTGCCAGACACCGCTCCAC 2581 37 100.0 35 ..................................... TGGCACTCCTTCGGGATGCATCGAGCATATCCCGA 2653 37 100.0 37 ..................................... GAGCCGCTGCCACTTGGTCTTGGCAGCGACTAGCGCC 2727 37 100.0 35 ..................................... GAACCTGGCTTGCAGGGCCTCCAGTTCCTTCTGGG 2799 37 100.0 37 ..................................... ATTCGGCTCCCGTCCAGCGCCGCACCGCCCCCTCAAG 2873 37 100.0 35 ..................................... TGGCTGGCCGGGGCGGGCGGGAACAGCGAGTTCCA 2945 37 100.0 36 ..................................... ACAACGATGGCGATGGTGGCGGTCGGGATGGCGGTG 3018 37 100.0 37 ..................................... ATGTGCACGCTCGTGTTCGCCACCGCCGTCTGCGGGG 3092 37 100.0 40 ..................................... AACTCATTCCACACCTCGCAGCAAACCCACGACGGGCGCT 3169 37 100.0 36 ..................................... AAAAAGGTGCGGTCTACAACGATGGCGATGGTGGCG 3242 37 83.8 0 ...........................A.AG..GTG. | ========== ====== ====== ====== ===================================== ======================================== ================== 45 37 99.6 36 GACACAAAAAAAGCCCCGCTTTGAAGGGGTTTGAAAC # Left flank : TGACCCCCTTTACCACCAG # Right flank : CAGAATAGGGGCTGCCATCTGCCGAGCACAGGCCACATGCGGTCAACAACGGGGGGTGGGCGCGCTCGTTCGGGCAGGATCCGGGGCCGGGCGCCCGCAGGTGCCCAGAATCTGGCCTTCCATGCCCATTCCAGACCGCATATGTGCCCGTGGGTGACATTTTTTGGGCAGGCGCTCACGCCGCAGGCGGGGCGTGCGCCGTGGTGCGGGGTGTGGGCACGACGCAGGGGCCGCGTGGTCGCGCTCAGGCGGCGGCCCTCCGCGCGTGCCGGTGAAGCCAACTGAGCAGGTTGCGGACCGCGCAGGCCTGGGAGAGTTCAAACTGCGCGGCGGCCAACCCGAGGCAGCGGGCGCGGCGGCAACCCTGGTAGCGCGTGAGCCAGGCGATGGTCGGTTCGACGCGCCAGCGGTCATGCAGCAACGCTTTGCCTTCGTCGCTCTGGTTGACGCGCCGAGCCTCGCGCATGTGATGGTGATAGTCCGAGATAAAGACGGTGCGG # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACACAAAAAAAGCCCCGCTTTGAAGGGGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [13.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.27 Confidence: MEDIUM] # Array family : NA // Array 2 5397-7486 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIJK02000107.1 Candidatus Chloroploca sp. M50-1 NODE_107_length_8175_cov_68.957266, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 5397 37 100.0 38 ..................................... GGCCATTCCGCTGTCACTTCGAAGTTAGAATCTCGATT 5472 37 100.0 36 ..................................... TCGATCCCGTACTCGTAGTCCACGCGACCGCGGTTG 5545 37 100.0 37 ..................................... GCGAATGATCCCCTCAAGGGACTTGATGCGGTCGTTG 5619 37 100.0 36 ..................................... ACGGGGCAAGTCGTGTCTGTCTCGGGGGCGCGGATG 5692 37 100.0 35 ..................................... CACGCTCCTAAGTTATAGTGGGTCGTCATTGTGAC 5764 37 100.0 36 ..................................... GTCGCGGTGTTGGTCGGCGTCGGCGAGGCCGTTGCC 5837 37 100.0 36 ..................................... CGCGCCACCAGGTGGCGACCACCCCGTTGTGCGTCT 5910 37 100.0 38 ..................................... TTTCCTCAGATCCACGGCCTGCTTCAGCGCCTGGTACG 5985 37 100.0 36 ..................................... ACCGCCACGACGGGCAGCAAGCGCCCGGTGCGGTCG 6058 37 100.0 35 ..................................... ATGGCGGCAATCGTGGCGCGAATAACGCTTGGATC 6130 37 100.0 37 ..................................... ACGCAGCGACAAGCGCGGCTGATTGAAATCGAGCCGC 6204 37 100.0 37 ..................................... TTGGCACATCGGGTGGCACCACCCCGGCGCAGTTCGT 6278 37 100.0 38 ..................................... GCACGAGTTCCGCCCGAGCGCGGCAGGCCAGTGCGGGA 6353 37 100.0 36 ..................................... CCGTGCTGAAGCGCAGCACCCGCCAGCCGTCGAGCG 6426 37 100.0 38 ..................................... GATGGCGGTGGTGGTGTTGGCTTCGTTGGCTTTGGCGT 6501 37 100.0 36 ..................................... TTGAAGGACTCGACCGTGTTGTCGGCGACGATGGCA 6574 37 100.0 36 ..................................... GGAGTGCAGAGGTCGCGTCCCTCCTCTCTGTAAACT 6647 37 100.0 35 ..................................... ACCCAATGGTATTCGCTCGTCCGTCCGTCCGTCCC 6719 37 100.0 35 ..................................... TCGCCCGCCAGCAGCTGAACAGCCGCGACAACATG 6791 37 100.0 37 ..................................... TGTGGCGTATGCGTCGCTGTGGCCGTGGGCGTAGGAC 6865 37 100.0 37 ..................................... GTCAGCGTGTCGTCGGCGGGCTGGTAAGCCCACTCGA 6939 37 100.0 35 ..................................... CTGACGTACATCGGGATGTCCACCCGGATGTTGGA 7011 37 100.0 35 ..................................... GATGGTTCCAGACGCTTGGCCGTCGCCGCACTCAG 7083 37 100.0 36 ..................................... TCAGCGTGTCGTCGGCGGGCTGGTAAGCCCACTCGA 7156 37 100.0 36 ..................................... TCGACACAACCCCCTCGCCCGACGTGCCGTTGCTGC 7229 37 100.0 38 ..................................... CTGAGCTCACTGGGCGAAACCTGCAGCACGGGCGGCTG 7304 37 100.0 35 ..................................... TGTGCTCCTTATAAGCTTTGCGCAGCTTCAATCTA 7376 37 100.0 36 ..................................... AGGTGGGGCAGACCTTGACGATCAGCTCACCATTGA 7449 37 86.5 0 .............................G...GGCT | A [7476] ========== ====== ====== ====== ===================================== ====================================== ================== 29 37 99.5 36 GACACAAAAAAAGCCCCGCTTTGAAGGGGTTTGAAAC # Left flank : CAGCCCTCGGCCCACGTGCGGACGATCTCGGCGCGTACCAACTGCTCCAGCGTGAAGGTCGGCGGCGCCCCGGGCGCGCCCTCGGGATGGCGATAGGCGGCACAGGCCGCGACCACGGCCGCGGGATCATAGGCCAGGCCGATGCGCACCAACGGATGGTCGCGCACCGTCGTCGTGAAAATCCGACGGAGGATGGTCGTCTCCGCCCAGACCAGGATCGGGCCAAGGAACATGATGATCCAGCCCTGGAGCCAGCGCGGCACGGCGGGCAGATCGGGCGTGCCAGCCCGGAGGATTGGTGGTAGAATAGGAAGCATAACCGTCTTTTTTGTGTCCTTGATGCGGTTTTCACTACAGTCATCATGCCACAAAAAAGCGGTTTTTCAAGCACACAGATCGGCGATCCTTCGCACCCCGAAAAGTTGCCGGTATTCTGCACCAGTCTCTTGAAGGGGTTTGAAACAAGACGGCGAACTGACGTACAGGGGGATGTCCACCCT # Right flank : TGAACATAACGCAGCGACGCCGCTTCCGCAACGGTGACACTGAACATAACGACGGCTTTTTTGGCGCATCTGTGCGCATATGCGCCTGGCACGCGAAGATGGAACCGCGCAGCGGGGTGGGCGATCGGGTGAGGCGGTGGGGTGGACCGTCGGGACGGCCCGGCGGACGGGGCGGCGCGCCGGGTCTAGGTGAGGCGCGGACCCACGCGACCGGCAATGGCACAGGGGGACATGCCCCGGCGGCACCGCAATGATCGCCAGGGAGACGTACGCGGGACATGGGAGGCCACGGCGAGCCCGGGCGGGTGCCCCTGGGCGGTCGAACCACCACCCACCTGCGTGTCCATCCCAGGGGCACCCGCCGCGGTTACGCCGCCGCGACCGTGGTGGCGGGCCGCACCTCCGCAGCGGCGGACCGCAGGCGGTGGAGCGCCCGCAGGTTGATCAGCACGTAGGTCAAGGTGTTCTGATTGACAATCGCCCGCCCACGCCGGAGCTTC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GACACAAAAAAAGCCCCGCTTTGAAGGGGTTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-6.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 24304-28203 **** Predicted by CRISPRDetect 2.4 *** >NZ_SIJK02000032.1 Candidatus Chloroploca sp. M50-1 NODE_32_length_71741_cov_70.218425, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 24304 37 100.0 36 ..................................... GGCAAGCGTGGCGCGGTTTGACGCCCGCTGCGTCTG 24377 37 100.0 36 ..................................... CGTGGCGCACGGCGATGCGAGCGAATTGCTTGGCCT 24450 37 100.0 35 ..................................... ATTAACAAGCTGGTGTAGGCGCGGTGCCAGTCGGC 24522 37 100.0 35 ..................................... AGAGCCACGCGGTGAGATCGGCGATCATCGTCATC 24594 37 100.0 35 ..................................... ACGCACGTCACTGCGTCGCGTTGGTTGCGCCTGGT 24666 37 100.0 35 ..................................... TTCGAGCGCGACAACGCGGCGGCAACGCTTGCCCT 24738 37 100.0 37 ..................................... GCGCTTGATCTTTGCCCGCTCCCCCGCTCGCCAGTGC 24812 37 100.0 35 ..................................... TTGCGGTGGGAGATCAGCGCCGCTGGTGCGCCTGC 24884 37 100.0 37 ..................................... GCCCCTGAAGGTGTGGCGTTACCGACGAACGATGATG 24958 37 100.0 35 ..................................... GCTTAATCCTGATGATTGGCTGGTGTTTGGCGACA 25030 37 100.0 35 ..................................... TTGAGCGGCGTGGGGTGGATGTGAGCGGCAAAGCC 25102 37 100.0 36 ..................................... CTTATTACCAGCGTTGCCGCAACGTGGACGGCAAGT 25175 37 100.0 38 ..................................... CAATGACCGTGAAGAGCGCAATGGCGGGCCTGGTCGGG 25250 37 100.0 36 ..................................... AGCCGAGGCCGCGCGCCTGGCCGCCAAAGTAGACGC 25323 37 100.0 33 ..................................... TTGCGCCTCGTGCGTGCAACGCCTGCGCAATGG 25393 37 100.0 36 ..................................... GCCCAAACACGACGCCTCCGACCAAGCACCCCGCTG 25466 37 100.0 37 ..................................... TGGCTTGCGGCGTTCGTGGCGACGGACGAAGATGCCG 25540 37 100.0 36 ..................................... AGCGCTATGGCGTAGGCTGTGGAACGTGACGCGGGG 25613 37 100.0 37 ..................................... GTCTTTTATGATCACGCCCTCGGCAGCATCAAATCGC 25687 37 100.0 36 ..................................... TCAGTTGTGGGCCGAGTTGAAAGCAGCGTATCGCAC 25760 37 100.0 36 ..................................... GTTCTAAATGAACGGCTGTACGCTTTCTATACAGGT 25833 37 100.0 37 ..................................... GATCCGCTGGCTTGCTATCGGGTGGCACTTGCAACAG 25907 37 100.0 38 ..................................... ACGTTCCACCTGTGACCGGATCCGCCGTGCCAGGCGGA 25982 37 100.0 36 ..................................... TAGTGACGACGCAGACAGCGCGGGGCCAGTCCCCGC 26055 37 100.0 36 ..................................... GCCCGGTGTGTCACCACCGAGCAGGCCACACCAAAG 26128 37 100.0 35 ..................................... ACGTTTGCCGACATCCGTGATACCTGCTTTGAAGG 26200 37 100.0 35 ..................................... GACGAAAGCACCGTCTATTGTTGGGATCAAGCAGG 26272 37 100.0 36 ..................................... TGGCTCCATTGCTCGCCTGAACGTCGGCACGGTATT 26345 37 100.0 36 ..................................... TACCTCAGTGGCGACGTGTCCAACCGGATCAGCCTG 26418 37 100.0 37 ..................................... AAGCGAGGCATCGGCAAGGCCGAAGCTGGCGTTACTT 26492 37 100.0 36 ..................................... GCTGTACGCGGCGTACCTTGCCGAGACGTTGACGGA 26565 37 100.0 37 ..................................... ACCGCAAGGGCAGGGTGGCACTTTGCATATACGAGGT 26639 37 100.0 36 ..................................... GTGACACAATACCCTGATGTGCCTATTCATACCGGA 26712 37 100.0 36 ..................................... TGGAGCGGCTGCATATTCGTGGTGTGCCACTCGTGC 26785 37 100.0 36 ..................................... CTGCCAATCAATCCATTGCTGGCGAACTTCGCCAAT 26858 37 100.0 37 ..................................... CTCACGGCGTACAATGCGCAGGTGACACCATGACGAA 26932 37 100.0 37 ..................................... TGCCGTATGAAACGAGCAAGCGCATCATTCGCTATGC 27006 37 100.0 37 ..................................... ATGTCGCCAGCGCCCCAACCTTCGATCTGGTCTATCG 27080 37 100.0 36 ..................................... AGGTGCCGCTCCGCTTGCTGTTGCCCACGGGCGGAC 27153 37 100.0 37 ..................................... TTTGCGGTGTAGTAGCGCCCCGGCCTGCTCAGGCTCT 27227 37 100.0 37 ..................................... ATCTGATTGTGGCCGAAACGGAAAGCAACGTCCTTGC 27301 37 100.0 34 ..................................... ACTTCATACGTTAAGCTACCATCGTAATCACTAA 27372 37 97.3 37 C.................................... GGCAAGGCCGCCGGGTTATCCTTGCGCCTGATGGGGA 27446 37 100.0 38 ..................................... GTCGGGTTGTGCTGCGCCCCAAGCAAGCGCAGCGTCGG 27521 37 100.0 35 ..................................... GCCGAACTCGACACGGCGGTGCTTGAGCGCGGCGG 27593 37 100.0 36 ..................................... GCGTTACTCACCCGGACGGCCTTGCGGCCCGCCGCG 27666 37 100.0 35 ..................................... TGCGTCTCGCAGCGTGCTACGACGCGCAGCTTGAG 27738 37 100.0 35 ..................................... AAAGGAATGATACCAGATGAAACAGTCGAAACAGA 27810 37 97.3 36 C.................................... TGGATAAGCGAGACGATCCGCGGATCGTTCAGCGCG 27883 37 100.0 34 ..................................... CAAACCGGGCGGCGTCGGTCAGCGTTGCGGCGAT 27954 37 97.3 34 C.................................... CAAACCGGGCGGCGTCGGTCAGCGTTGCGGCGAT 28025 37 97.3 34 C.................................... GCAAACTCAAAGACGCGCAACCCGTGCTCGATCG 28096 37 97.3 34 C.................................... GCGACGGGCAGCAGCGCGGGCGCGGTGAGCCTGA 28167 37 94.6 0 ....T...T............................ | ========== ====== ====== ====== ===================================== ====================================== ================== 54 37 99.7 36 GGTTCCGCACCATCGGCTCAAGGTTGAGCACTGAAAC # Left flank : ACCACCACTGTTGCGACGATCCAGGCAGCCATCGGTGGCGAGCACATGCCTGATGCCCCAGCCAATCGTCGGCCATGCATCACCTGCGAATTTCGTCGTTTTTGCAACGACGTTGTCTAAACAGGCAAGCTTTAGCGCACAGTGGACATCCCTTGACGCCCCTATCGGCAACGCGTGAGCGCATCAAACCGCGCTCACGCAGAGCCAGAGACAGTTCCAGAAGCCTCCAAGAGAGGTCGTGTCGCAAGTCAGTGCTTGACCCAGGCAAATTGGCCCATCGCAAAAGCACCTGTCAAGCAATCGCGCCTCATCTAGAGCATCAGGATACGTAAACCGAGGGCTCGCAACTTTACAGCGTTGGGCAACAAAACCCAAGTTGCGAAGAACGGACTTGAAAGGGCGCAAAAACGTCCTATAATGACAGCACAGGAAAGCATATGACGCAACAAAACACACCTTCCCGGCATAAAAGACCTCCGCAGCCCCCAATCAAGGTCGGG # Right flank : CGCTATGCGCTGCCCTGGGCTACGCCCGGATCTGCGTATGGATCGCTCCGTGGTGCGCGCCCGGTGATCAATTGCTCTGTGATTGCCATCGATCACACCAGATATGCCTACGGGCGTGGATTGCGTTCATTAGAGGAGGATCGCACCACCATCATGCCGGTGGGCGCAGCAGCATACGGGTGAGGATCACACCCACGGTGGCCCATGGGCTGCTGCGCCCCTACGCCGGACGACGGCATCCGCTATGACCACGGTGATCGCCCCATCTCCGCCGTGCCCGTGCCATCCCCGCCACCCCATCGCCAGCCCATGGCCGTCGCTGCGGTGCCCCGCCCGTGCCTTCCCATGGCCGTCAGGCCGAAGCACGCGCCCCACACGCCGCCCCATCGCCATCCCCCCGTACGGGCACGGCGCCGCCGTGCCCCGACGCCATCCCATCGCCATCCCCCCGTACGGGCACGGCGCCGCCGTGCCCCGACGCCATCCCATCGCCATCCCCC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTCCGCACCATCGGCTCAAGGTTGAGCACTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.30,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-30.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //