Array 1 203892-205680 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRLG01000001.1 Bifidobacterium pseudocatenulatum strain AM13-2 AM13-2.Scaf1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ===================================================== ================== 203892 35 100.0 40 ................................... ATCACGCAAAATAGTGAGCAGTTGAGCATCGGCCATGGTG 203967 35 100.0 37 ................................... AACGCTGCGTTTCGGCATGGCCTGTTCTTTGTTCCAT 204039 35 100.0 38 ................................... ATGACGATTTTCGCAAATACGCTACCACCGCGTCGCAG 204112 35 100.0 37 ................................... ATTGGCACCGGCCTTCCCTTCCGCTGTCGCAGCTTGC 204184 35 100.0 38 ................................... ATTTAAATCACTTCGCTCCGTCGGTACGCCAGGTCTTG 204257 35 100.0 35 ................................... ACTAAAAGTGGCGTGCGTGCAATGTCGATAGCGTC 204327 35 97.1 38 .G................................. ATCGTCCTCATGCGGATCCATGAGCTGGTGGACGTGTT 204400 35 100.0 39 ................................... AGATAGGCAATGTTTCCATCAAAATTATATCATGCGGCG 204474 35 100.0 38 ................................... ACGCAACTGATTACGATGTTGCCGACGATTGTTCGGCA 204547 35 97.1 36 .G................................. ATTTTACCGGCGAGATCGTTGGAGCGTCATTCTACG 204618 35 100.0 38 ................................... ATCCATGCTCATACCGGTGGCCGGCAGCGTGTCGCGGG 204691 35 100.0 37 ................................... AGCTAAGACTGGCGAGGAAGTCGTGGAAGACTGCAAG 204763 35 100.0 38 ................................... ACCGACCAGCCGGGAAGCCGTCCAGCAGACGAATACTG 204836 35 100.0 37 ................................... AGGTTTGAGCGCCGAACTCCTGCCGGAAGACGAAACA 204908 35 100.0 38 ................................... GCTTGGAGACGATGTCTACGGACGTTACTCGCTGCCAA 204981 35 97.1 37 .G................................. GCTGGTCTGCACGAAGGAACTGTGCGACGAGATCGTA 205053 35 100.0 37 ................................... GAGGTGGCCTGAGCGGTAACCTTCAACACTTCGGCGG 205125 35 100.0 37 ................................... GCGCAAACACCGCGCGCGTCTATAACAAGCAGACCGG 205197 35 100.0 36 ................................... GGGAAAGCTATCCGGTCGTTTAATCGCCGATCAGAG 205268 35 100.0 53 ................................... AGTGTTGGGCGTGTGCCTGGGACATCAGATCATCGCCACCGCGCTGGGGGCGA 205356 35 100.0 38 ................................... ACTCGACGGTGACAAGGTCGGCAGCGTCGTCAACGGAT 205429 35 100.0 37 ................................... AGCGCGCGGCGGCAATCCGGAGACTGAAGCCAGGTTC 205501 35 100.0 38 ................................... AGGGGACAATGACCCCGCTGATTTGAGGGACGGGTATA 205574 35 100.0 37 ................................... AGAGAGATAATAGTTGGCGAGCCACTGGCTCAGATAG 205646 35 97.1 0 ..................................A | ========== ====== ====== ====== =================================== ===================================================== ================== 25 35 99.5 38 ATTCCTGAGCTAATCAGCTCAGGACTTCATTGAGG # Left flank : GATGATAGACGTCGTGATCACGTGGCAAAAATATTACGGTGCTATGGCGAGAGGTTGCAGTATAGCGTGTTCTTTCTGCGGATTCGGCCTGCAAAAATGCTGGTTGTCCAGAATCTAATAGAAGTTGAAATCGATGGTTCAACGGATTCAGTTGTTGTCTGTTTTCTCGGAAAAGAAGAGCAGGCAAGAGAGGGAATGTCATTCTTGGGACGACGGGAATACAGTGATTTAACCATTCCGACGGTTATCTGATTTCACTTTAACCTCTCTGATTGTCTTTCACCTATGTGATTGTGGCTTGATAATTCAAAAGGTTTTTTATGAATTTTGGAATACGAGAGGTGAATCATTGCTGCGACACGCGATGACCTCTCGCATGAGGAAATATAAGGGTTTATGTCTCTTTTTCTGGTGATAAACTGACTGGAGGGAGAGGTATCTGTTCCGCTCTCGCAAAGTTTTTAATTCGCTTAGTCATTAGAGCGGATTAGAATGAGACC # Right flank : AGTCTATTGGCTCTGATTGTCGTTGTGCGCCCTGGCTTGTGAAGCCGCTTTCTGAATTAGGAATAGCTGCTATCAGGGAGGGCAAGAGAACTATGTCAAATTTGACGTAGATTGTGGCATTTTCTGTGGCCAAGTTCATCCTTGATGAAAGGATTTCTACTTGTAATGTAGTATTGGTGCGTATGATGCTGAGAATTGACGAGCGCGATTTGAGGTCGAAGCTCAATGAGCACAGGAGCCTTATTGGATATGGTTCCAAGGGCGACGGCATCGCCAACATTGTTGCGGGCCTATTCTATATTCCAACAGCATGGACGTTTGCGGAATTGCCGATGCGGGCACGATGCTTATTTGCTGTGCTGGGTGTTGTGATAATCGCGTTGGGTGTCGCGAGTATCGTATGCAAGGGACTCACTTCCGAAAAACTATATAAGGAAATCGAATCGATGAACAGAAGAGCTAGCTCTCTCATTGCGGTCAAGGATGGCATGGACGCGCTG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:-0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTGAGCTAATCAGCTCAGGACTTCATTGAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.10,-7.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [58.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //