Array 1 2092-2242 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDDK01001038.1 Streptomyces griseus strain NRRL B-2165 Streptomyces_griseus_NRRL_B-2165_contig_1038, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2092 29 100.0 32 ............................. ACTACGCCCGCAGCCCGTACCCGATCAAGCCG 2153 29 100.0 32 ............................. CACGCACACACGGAGGCCCGCCATGGGTGACA 2214 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================ ================== 3 29 98.9 32 GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Left flank : GTCATCGTCCTCACCAATTGCCCGCTGGGCCTGAGGGGTTTCCTCACCCGCTGGCTGCTGGAGATCTCCCCGGGCGTCTTCCTCGGAGCCCCGTCCACCCGCATCCGTGACCTTCTGTGGACCGAGGTACGCACGTACGCCGGCCAGGGCCGTGCCCTGCTCGCCTACCAGACGGACAGCGAGCAGGGCTACGCCTTCGAAACCCACGACCACACCTGGCACCCGACCGACCACGAAGGCCTGACACTCATCCACCGCCCGACCGCCCGCGTCCCACGCGCGGAAAGCCCGGGGAGCCCGGGGAGCCCGACGGTCGATGTACCCCGCCAGGGCTGGAGCAAGGCGTCGAAGCGACGGCGGTTCGGGGGCGGGAGGTAGCCGGGGGTGCGAGGGCAGGGATGGACCGATGTCCGATAGAGGACACAAGGACGGATATGCCGGAATTCGGAGAAGTGAGTAAAAACAGGACTCCGTGTACATAGAACACCAGGTCAGCGAGT # Right flank : CCTCGCCGGAATCCTCCTCGGCCTCTCCCAAGGTGGTCCCCGCGCGTGCGG # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGTTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGTTGGTCCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-21.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.74 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 8900-7894 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDDK01000695.1 Streptomyces griseus strain NRRL B-2165 Streptomyces_griseus_NRRL_B-2165_contig_695, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ==================================== ================== 8899 29 100.0 32 ............................. CACCGGTTGGACCGACAGCGCCGGCCGCGCCT 8838 29 100.0 36 ............................. ACCGGGCAGGACGTCCTGACCCGGGTGCGCGCCGAC 8773 29 100.0 32 ............................. ATCGCCGAGGCCGACACCTACGGGCCCGCCAC 8712 29 96.6 32 ............................G TGCTTGAGCAGCCCGAGCAACGTTGTCGCCGA 8651 29 96.6 32 ...........C................. TCGGGCGGGCGGAGCGGGCGCGCAGCACCCGG 8590 29 100.0 32 ............................. CGCGACCTGAACCGCATCCTCGGATGGCCCGA 8529 29 100.0 32 ............................. TCTCGCCCCGCCCCGCCGGGCCCCGACCGCAT 8468 29 100.0 32 ............................. GGGCGGGGACTGCGTATGGCGGGCCCCCTCCA 8407 29 100.0 30 ............................. GGCGCGCAGTCCCATGGCCGCGCCCCTCTA 8348 29 100.0 32 ............................. GCGACACCGCCCCTGACCACTGGAACAACACC 8287 29 96.6 32 ..............C.............. CCGCCGCCGGTGAGCCAGCCGAGGGGGATCTC 8226 29 100.0 32 ............................. CGCCGACCGACTGCTCAAGGCCCTGCGCGACG 8165 29 100.0 32 ............................. TCGGCGTGACCGGACCTCAGATGATGGGGGCC 8104 29 100.0 32 ............................. TGACGCTGACGCAACGAGCCCAGCAGCGCCCA 8043 29 100.0 32 ............................. AACACCCTGTTGTAAGAGGTTGATGTGAGCGA 7982 29 100.0 32 ............................. GACGACGAGAGGTCGTGGTCGTAGGCGAGCAT 7921 28 93.1 0 .....................C.-..... | ========== ====== ====== ====== ============================= ==================================== ================== 17 29 99.0 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : GCGTGCGGGGGTGTTCCCGTCACCGCCGTCGACATGAGCGACGACCTGA # Right flank : ATCCGGTCGACGGGGTAGAAAGACGCCCCCCTTTGCATGGGCCCGACGCGCAGGGGCGCTCCCCCACAGCACACTCGATCAAATACGCGCACTTGTATTCACTCTCGGTCATCGCGACCGTGCGGGACGTCGACGATGTCCAATACGCCCATGAGCCGCGATCATCCGGAAAGCCTTTCGGCATACGCCCGCCTGTCCCCCGTATCCCGCACCGCCTGGGGCAAGCACGATCGGCAGACCGAGCAGTGGCTCCCCCTCTGGCGGCACATGGCGGACAGCGCCGCTGTCGCGGAGCGGCTCTGGGACCAATGGGTGCCCGACAACGTCAAGGCGCTCATCGCGGACGCGTTCCCGCAAGGCGCTCAGGACGCCCGGCGAGTGGCCGTCTTCCTCGCCTGCGTCCATGACATCGGAAAGGCCACACCCGCCTTCGCCTGCCAGGTGGACGGGCTCGCCGACCGGATGCGGGCAGCCGGGCTCTCCATGCCGTATCTGAAGCA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,0] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.30,-13.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [30.0-25.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 47-808 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDDK01000079.1 Streptomyces griseus strain NRRL B-2165 Streptomyces_griseus_NRRL_B-2165_contig_79, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 47 29 100.0 32 ............................. CGCCAGCGACAAGTTGATGTCCCGCTCTGCAA 108 29 100.0 32 ............................. CTTACGTCACTTGCATGCCGCGCGGGAGGATT 169 29 100.0 32 ............................. CAGAGGCACGGTGATGGCAGCGTGGGTGGAGG 230 29 100.0 32 ............................. TGCACTCCGTCCGCGACGCCCACGGCCGGGTC 291 29 100.0 32 ............................. GACTGCGGCTCCGTGACCATCGGCACGACGAC 352 29 100.0 32 ............................. GATGTCGGCGACGGCATCCGGTCCGTGGCGTC 413 29 100.0 32 ............................. CACTGCGACGCCAGCTCACTCGATGACCCGAT 474 29 100.0 32 ............................. GGACCGCCGTCGGTGATCACGGCCGCCACCAG 535 29 100.0 32 ............................. GCGGCAGCTACCAGTTCCGTGGCGTCGACTCT 596 29 100.0 32 ............................. CGGCAGGGCCCCAGGAATTCGACAATCGCCAG 657 29 96.6 32 ........................C.... GGAGCCGCGAGACGGCCGGCCGCACCCACCGC 718 29 100.0 32 ............................. GAGCACGACCGTTCTGCGCTGTCGTGAGTCTC 779 28 82.8 0 ..................TCC...-C... | T,G [797,807] ========== ====== ====== ====== ============================= ================================ ================== 13 29 98.4 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : GCGGGGGTGTTCCCGTCGCCGAAGCAGTTCGCATCATTCGACCGGAG # Right flank : CGTGATCGTTGCGTAGACGCGCGGGGTCCACCTCAAGAGCGTCCGCGACCGCTTTGAGCACCTCGTCGCTGGACCGTCGGACACCTCGCTCGATGGCACGAACCATGGCATAGGAAACGTGGGGGGCGCCGCGAGTTCGGTTTGTGTGAGCCGGCGACAGGCGGCGATTCGCCTGCCGATTTCCTGCGGACTACCGAAAGACACCCGCTGACCGTACGCACACGAAGAGTTTCCGGCGGTAGATTCCTCTACTTCTGTGCGATCTCGATGAGTTACGTCAGTGACTGGATCACCCAGTCGGCAGTTGCGTGCACTTGGTGGTCACCGCCCCATAGTGCCCCCATGGGCCGCGGCGGATAGGGGCCATGCGCAGCCCGGCCTGGCGGCGGGGAATGCGTCGTTCACCGGGTGATCACCGACGTACACGGTTCCTCCCGCCGGAGCACCGGACGTGTCGAGGATCCGTTCGAAGAACTGCGCCGACGGTTTGGCACAGTCCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [26.7-30.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1113-1385 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDDK01000829.1 Streptomyces griseus strain NRRL B-2165 Streptomyces_griseus_NRRL_B-2165_contig_829, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1113 29 100.0 32 ............................. CCGTTGGCTGACCAGCACGGTTCGCGCGCGAT 1174 29 100.0 32 ............................. ATCAGCGGCCCTGGAGGGTCTTGGCCACGCGG 1235 29 100.0 32 ............................. ATTGCTACAACCCCCCAGAGTTGAACATGCGC 1296 29 100.0 32 ............................. AGATCGGGACCGTTGGCCGTGGGCACGTTCTC 1357 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 100.0 32 GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Left flank : TACAGAAACCCCCTTGATCCGCGGAGACGCGATCAAGGGGGTTTCTGCGTTGGGTACCTGCTCCATGGCCCGAAGGCCATGGCTGACTAGCGGCCCTGCCCATGGCGGGACCATGCGCACGTGCGGCGTCCGCGTACGCGCCTGCGGACGAGACCACCGCAAGGAAGTCCGCCGTATCGGACGCGCTCACGAACCACCTGTCACGCCCCCTCTCTCGGCTGACCGTCATTTCCCCAACCGAGATCGCCGCCGCCGACGCGTCGAAGCCGCTGAGATGCGAGCCTGGACGGCCACCAAGCGTCCTGGCCGCGCTCGCGGTTGCCACGGTGACCACCACTCTCTTTTCAGGAGGCTGCTCTTATGGACTGAAGAGAGGCAGAATGACTGCTGCCGCACAGCGCTCTGCGAGTACGATCACCTTCGAGGTGGGCGATATGTCTCTTTCTGAAGAAGTAAGTAAATTCAGCTCCGTCACCTCATAAAACCGCAGGTCACGAAGT # Right flank : GTC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGTGCGGGGGTGTTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [0,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCGTGCGGGGGTGTTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [56.7-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //