Array 1 97461-98890 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAKN01000001.1 Prevotella saccharolytica JCM 17484, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 97461 47 100.0 30 ............................................... CCGTCATTCTTAGCTAACAGTGTGCGTTCT 97538 47 100.0 30 ............................................... GCTCTAATGATTCTTACTTCGGAGATTATA 97615 47 100.0 30 ............................................... GTTCTAATGTGTTGAGTTCTTTTGTTGGTG 97692 47 100.0 30 ............................................... AACCGATAGTTGATGAAGCTACTGGAGAGC 97769 47 100.0 30 ............................................... TTAAGTTGTTGTCTTCTTCTGTTTCTCCAT 97846 47 100.0 30 ............................................... ACCGACAAACACACTGTCTAGCCAATGAGG 97923 47 100.0 30 ............................................... CCCTTTTTATACAAAACGGCTGGTAAGATC 98000 47 100.0 30 ............................................... GGTGTGGTAAACGTATTTACGACACGTACC 98077 47 100.0 29 ............................................... CGCTTATTCGAAACTCTTCGCTTTATTGT 98153 47 100.0 30 ............................................... ACTATCTTTGTAATATAAATAATACAATAA 98230 47 100.0 30 ............................................... AAATTAAAGTGCAAGATTTGGCTAATAAGA 98307 47 100.0 29 ............................................... CAAAGTGACCAATGTTGTGGATGCTATAC 98383 47 100.0 30 ............................................... TAACAACTCAAGTAACCGACGTGCAGAGGC 98460 47 100.0 30 ............................................... AGCTGACTTAGTAGAGTATACAATGGAAAA 98537 47 100.0 30 ............................................... GATGCGCCTATACAAGTAGGTGACGTTACT 98614 47 100.0 30 ............................................... TAACAACTCAAGTAACCGACGTGCAGAGGC 98691 47 100.0 30 ............................................... GATGCGCCTATACAAGTAGGTGACGTTACT 98768 47 100.0 29 ............................................... TAAAAGAAACTTTGCATAACTTTCATACG 98844 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 19 47 100.0 30 GTTGTTGCTTATAGTACAAAGGTATTAAAATTCAAGCAAATCACAAC # Left flank : GTGGATATTGGTCTTCTTCGATTTGCCTACGGAAACAAAGAAAGACAAGAAAGCTATATAGACTTTCGTAAATCTCTGCAACGTGATGGTTTCACCATGTTTCAGTTTTCTATTTATGTACGTCATTGTGCAAGTATCGAGAATGCTGAAGTTCATATGAAGCGTGTGCGAAATCTTTTACCAAAATTTGGAAAGGTTGGAATTCTTTGTATCACTGACAAGCAGTTTGCTAATATCCAGCTATTTTTTGGTGAGAAGCCCCAAAAGCCCAATGCTCCCGGTCAACAGCTCGAACTATTTTAATTTATATACAGGAAGTTTTTCTAAGCAACTTTTCCACCTAAAGTAAAATTTTCAATAATAAGGAAACGAAGGATAGTACATTATTTAGGAATAAAAAATCCCGCTCATATAGAGCGGGATTTCACGTTTGTACTATCTTTTTTATTTTTCTGTTTTACCTTTTAACTTTCTGAATATTAGGAATATACACGTATTCT # Right flank : CATTAATAAAAATATACAGCCACAGGAAGCTGTTCTTGCTTATACTATAAAGGAATCTAAGCAATTACCTGAACCCCGCATTACCCTCATCATAGGATGCTAAACGCCCTTGCACTGCGTGTGCAAGGGGGCGTTTGGTATGAAACGAAAGACCACTGTGTAACTTTAACGTAACGTCTTTATATACTACGGCAGAATCAGATGTACCTTCATCGTTTTCTCCACCCCATCTACAGCCGTTTCGTTAACCGATGTCAGTCTATACTTTATGTCGAGGAAATAACCCTTTTTCTCTGCTCCTATAACCTCAATCTGAGGCTCTTCAAGGTAAATGTCACGATCTTTTGTCTCGCTGCTCGTCGGAATCCACGCCGTTACGTTATAGTTTCCGTTCTCGCTTTTCACTTTTACGGGTTCTAAGTCTACATAACCGCTACCTCGTTTTATCGACATTTGTACAAGGTTTATCCACAACCTCGAATCTATGCGTTTTACTTCTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTGCTTATAGTACAAAGGTATTAAAATTCAAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.90,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [78.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 267115-266750 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAKN01000001.1 Prevotella saccharolytica JCM 17484, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 267114 36 100.0 30 .................................... GAGCAATAATATCATAAGCACTTAAATTCA 267048 36 100.0 30 .................................... TTAAACGTTTGATTTATACGTGTTTGCGGG 266982 36 100.0 30 .................................... TCTCAGCAGGAATACCTTCACAGTCTCCAT 266916 36 100.0 29 .................................... AAATTGTTATTGATTAACTAACGAAACGT 266851 36 86.1 30 ..........................C.T.CC..A. TATAAGGCTTAAAACGTACTCTTCTGTCAT 266785 36 88.9 0 ............................T.CC..A. | ========== ====== ====== ====== ==================================== ============================== ================== 6 36 95.8 30 GTTGTGTCTACCTCCTTTTTGAGAGGTAAAAACAGC # Left flank : TTAGAATTAGATTTATACCAAACTTGCCGTATCGACATCTTTCAGCAAACGCTTGGTTTGGAGGCGCAATTGCTTGATAAATACTCTGATTTAAATACTGATAATTTTTATCAGATGCTGATCGGTTGGAGGAAAAAGGAAGGTATACCCCGTAATATCAAAGAGGATACTGATTTTTTAAAAGATGTACGCAATGCCTTTTCGCATAATCAATACCCTGACTCAAAAAAAATAGCCTTTAGGCGAATAAGAAAGTTCAACCCGAAAGAACTTATTTTAGAAGAGGAAGAGGGCCTGGGCATTGCCACACAAATGTATAAAGAGGTGGAGAAGGTTGTAAATAGAATAAAAAGAATCGAATTGTTTGATTAGTATATATCCATTGTATCTCTTGTCTACAAAACCAAAGAAACAAAGGTTTTATATTCAAAGGTTCGTATTATTTTTATAATTTTGCTCCAAGAATACAGCGTTAGTAAATAAGGGAACACAATCGATCA # Right flank : AGATTTTGATATAAGTTTGCAGCTATTGTAAGCCAGAAAAAATGAAACGAGGGGGAGAAAGGACTTGTCTTGGGGTATTACCAATGTGTGGTAATACCATTACCAATAAGCGGTAATCCTGTTACCAACAAATGGTAATGGTGTTACCACACATTGGTAATAGCCCGACTGATAAGCGATGACATAAAAATAAAAAAGCGATTACTGTGCAGTAATCGCTTTTATGTTATTAGAATTGGGCTGAATAATATACCATAAAGGTATTTTTCCCAAGCATTTATAAGTGTGTATTGAATCTAAAAAAATGATAGGAATAGCGTTTATTTACTTGTTACAAGCATACGTTTCTATCTATTGAAGGTAAAGGTAAAAAGGATATAAACCTTTATTATTTATCCTTTATCTCTCGTTTTTCTAAAGAAAACGATGAGGAAAACAGAGAAGAGGATGAGCAGAAAACCGATGATGATGGGTAGAGTAAAGGGCTCGTGAAACACAAT # Questionable array : NO Score: 3.05 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGTCTACCTCCTTTTTGAGAGGTAAAAACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.30,-7.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //