Array 1 2978-571 **** Predicted by CRISPRDetect 2.4 *** >NZ_NOVQ01000003.1 Corynebacterium sp. LK14 contig011, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 2977 29 100.0 31 ............................. ATGCGAACCAGCGCGATACACAGCACCCCAC 2917 29 100.0 32 ............................. AATGGCTTTCCATTCCTGCTGGTATTTCTTAG 2856 29 100.0 32 ............................. AGCTTGGCGGGCAGAGTTACACGACGCATGGG 2795 29 100.0 32 ............................. ACTCATGGGTATCACTCCGGGATGACGTACAG 2734 29 100.0 32 ............................. GTTTTGTTGTCGGTCTCGAAGGAGATTGAAGC 2673 29 100.0 32 ............................. AGGGCGCCAGGGCGCCGCGCCGTGGTGAGCTA 2612 29 100.0 32 ............................. ATTGCTAACGGCGTGCCGATGGCCGTAGCCGT 2551 29 100.0 32 ............................. AAGGTGAGTGGATTGCGCCGGAAATCGGCGCC 2490 29 100.0 32 ............................. AATGATGGAATGCGCCCGCCTCAGCACAAACC 2429 29 100.0 32 ............................. AGCCATTGTGTTCATACATGCCCGAGGGTGAT 2368 29 100.0 32 ............................. TATCTTCAAACCCAAAACGTCACCTGCAACGA 2307 29 96.6 32 ............................T GAGTACCTGCGTATCCCAAATCATTTGTGCCG 2246 29 96.6 32 ............................T TTAGGTAGTTTGTTTCGGTAGAAGATAAGCGC 2185 29 100.0 32 ............................. GAGTCCGATAAGGTCTCGGAGAAGGAGGAAGC 2124 29 100.0 32 ............................. TTCACGGTGTACACCTTCCCATCAATCGGGAG 2063 29 100.0 32 ............................. ACCCAGCTCAACCAAAAGTGTCTCCGCATCCA 2002 29 100.0 32 ............................. GGCCCATAGCGACCACCCATAGAACAGTAGGT 1941 29 100.0 32 ............................. CGGCTAAATAATGCTGAAATGTTCGGCCCAGG 1880 29 100.0 32 ............................. GATGTATGACGCCAGAGGAAACTGGGTTCCCG 1819 29 100.0 32 ............................. GAGTACTCGTACTGGAAGAAGATTGGCTATGC 1758 29 100.0 32 ............................. TTATTGACGCTATGGGTGGCCCTTGGTCACTT 1697 29 100.0 32 ............................. GTCGAGTTTACCGTCGTCGGCTCCCCGGTGTT 1636 29 100.0 32 ............................. GAATCTCACCATCCATTTTGACCCAGTTCCAG 1575 29 100.0 32 ............................. ATCGACTGCGGGTTCTCATTGATTTCGCCCAA 1514 29 100.0 32 ............................. CAGGCGCCGATGTAGTTTTTGTCGCCTTGTAG 1453 29 100.0 32 ............................. ATCGGCCGGGTGAAGCTGTATCGCGACCACTC 1392 29 100.0 32 ............................. ATCGCCCGCACCTACCTTGACCAGATGGATGA 1331 29 100.0 32 ............................. ATAAGCCACCGCGGTTTATGTGCTGATTAGGT 1270 29 100.0 32 ............................. AGGTCACTGTAGTCCGCAGCCGCGAGGCGCAT 1209 29 96.6 32 ............................A CGGGTTTAACCTGCTCATTGAGTGCGACAGTG 1148 29 100.0 32 ............................. GTGTACATGCAAGGGCCGGTGGATGATTGGCG 1087 29 100.0 32 ............................. ATCGACACTGCCCAGCAAGCGACGCCGCCGAG 1026 29 100.0 32 ............................. GCGGTACGCACCGCCGTATCCAAGGTGGACGG 965 29 100.0 32 ............................. AAGGTTCAGGCCGCCGGTGATTTCCAAGGCCC 904 29 100.0 32 ............................. AGTCATCAATCGTGGCTTGAATATCCAGCAGA 843 29 100.0 32 ............................. GCCGCCTCACGAGTGACATCGTTCGTATCAAA 782 29 100.0 32 ............................. TGGACCCACTAGCCGATTTGGCAGAAACCCTG 721 29 100.0 32 ............................. TGAAATACTCGGTCCCGGTAGGTGCCGTCATT 660 29 100.0 32 ............................. TAAGCCTCACCTAACTCAGTGCTACCGCCTCC 599 29 96.6 0 ............................T | ========== ====== ====== ====== ============================= ================================ ================== 40 29 99.7 32 CTCTTCTCCGCGCACGCGGAGGTATTTCC # Left flank : TAAGGAAGCAACTACGCCGGGAGATCCATCGGAAGAACTTACTCGTCGACATGCTGGAAGTTCTCACAGAGGTACTCACGCCCCACTTACCTTCACGTGATGACGATCGACTCGTCTCTGGGCGCGGCGATGAAGTCGCCGGACACACACAATATGGACGGCGCTGAATGTTTCTTGTAATCACAACCACCAGCCTCCCAGACCACATGCATGGCTACCTTTCGCGTTTCCTTTCGGAAGTAGATACCGGTGTTTATGTAGGAAACGTTTCCCGTCGCGTCCGCGATAACCTGTGGCGACGGCTTTCCAATGCCATCGCCGACGGCAGCCTAACCATGATCAACGAGGACCGGACCCGCGAACAGGGCTTTGCAGTCAACACTATGGGACCGCGACGCCGTACAATCATTGACATGGACGGCCTTTTACTTGCGTGCACGTTTTCGCGAGAACATACGCAAAACCGCACCGAGACAAACTAAAGTTGCTGTTCAGGAAGT # Right flank : TTTTAACGCTTCGCTTGGGTTCAGACCGTCGTTGCACCACTTCTAGTACGGAGGTGTTGTTATGGCACAGCGTCCGCAGGGCACTTTTGTGTCGTTATCGGAGTCGGATAAGGAGCAGTTGCGGCGGTTAATTGCCGGTGGCTTGAGTCTGCGCGCAGCGGTGCAAGAGGTTGGGTGTAATTATCAGCATGCGTATTTCTTTGCCCATTGTGAGCAGTTGATTCCATATAGTCCGCGTGGTCATGATGCTCAGGCTCTTGCGGCGGGCATCGAACTGGTGAGAAAGGGTGTGCGTGTGCATACCGCGGCGCGTCAGGTTGGTGTCTCTGATCCAGTTTTGCGCCGCCAGGCGTGCAAGCTAGGTTTGTGCGTGCCGGTCAGTCAGCTGCAACGGCGGATTAATGCCACCGAGCAACGTGTTATTTTCCTGCGTCTGCGACTAGCGAGCTTGTCGACTCGTGATGCTGCTGTAGCTTGTGGTATCAGTTTCCGTAAGGCGT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCGCACGCGGAGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //