Array 1 34484-36170 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNXO01000024.1 Aminicella lysinilytica strain DSM 28287 Ga0310519_124, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 34484 36 100.0 30 .................................... AATTTACATTAACCCAAAATGGTACCTTGG 34550 36 100.0 30 .................................... CTATTGTTTCATAACAGTAACTTGTGTTTT 34616 36 100.0 30 .................................... TGTAAACTATTCTAATAGAAAGGGAATATC 34682 36 100.0 30 .................................... ATTCGGATTTATCACTAAACTGCTCTATTG 34748 36 100.0 30 .................................... ATGTTCTTCCACATATCATAGATGGTTCTT 34814 36 100.0 30 .................................... GTTTTCGTTATTTCTTCCGCTCCGTCTGGT 34880 36 100.0 30 .................................... TTGTGTGTCGGCAGTTCCTTATGATACTGC 34946 36 100.0 30 .................................... ACCCGGCAAGTATGGACGTGTACAGTGTGG 35012 36 100.0 30 .................................... TCGGCCGTGCTCTGATAGTTCTGCAAATCT 35078 36 100.0 30 .................................... CGGTAGCCCAGACTGCGGTTGCACATACGG 35144 36 100.0 30 .................................... TTCCATGTTTCATTCACTGTAGCAAGGTCG 35210 36 100.0 30 .................................... TAACAATTGTATTGATATGCGAGCCATATC 35276 36 100.0 30 .................................... CCTTTTTTGGGTAAACATACAAACATATAT 35342 36 100.0 30 .................................... CTATCCCGTCAAGGTATTCATTAAGCAACT 35408 36 100.0 30 .................................... CTGAAAGAGTTACTTAATAAACACTGTCTG 35474 36 100.0 30 .................................... CTGTCTGCCGCAGTAACTGATGTAAAAAGC 35540 36 100.0 31 .................................... CTAAACGAAAGAAAAGACCAGCTCTTTCTCC 35607 36 100.0 30 .................................... CATCACTTGCGATACTGTCTATTTCGTCCT 35673 36 100.0 30 .................................... CGGAGTGGCTTGAACAGGAAGCGGAAAAAC 35739 36 100.0 30 .................................... TGCGGCTGATGATTTGAACACTCTGTCGCA 35805 36 100.0 30 .................................... AATTTTGCGTCTGTTGGAACATCAGAATTT 35871 36 100.0 30 .................................... TATCAAAATGATGAAAGCGTACTTGAAAGA 35937 36 100.0 30 .................................... TGATGCCTGCAAGTCTGTGATGCCCGGCTC 36003 36 100.0 30 .................................... AAGGTAATGGCACATTGTGCGAATTAGACC 36069 36 100.0 30 .................................... GTATGGTTATTATAGTACGCCGTCAACGCG 36135 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 26 36 100.0 30 GTTTGAGAGTAGTGCAATCTCATATGGTAGCTGAAC # Left flank : ATGAGAGATTTGCAAAAAAAGTTGTTGGCTGAATTGTGCGAGGAAGTTGCCTTACAGGGATATGATGATAAAATTGCAGAGGCTTACGGAACAATAATATCATATATAAGTGAGATGCAAGTAAAAAGTGATTATAATCTTGATTTTGATGAACAGAAAGGTATGTCGGATATTTTAAAATATTTCGATGTCCATGTAAAAACTCCCGAAGGGAGTTTTGCTGAAAAGCTGATCGAATATGGTTCTTCTATAAATAGACTGTTAGGACGGGATGTATTTATTTTACTAAACTGTGATGCATATATTAGTGAAGCTGATTATAAGTATATTTCTGAATGGATATTGTATGAGGACGTATATTTGGTAGTTGTGGAAAATAAGCAATTGCAGTTGAAACAGGATTATAATGGATGTATAATAGACAAGGATTTATGTGAGATACACTAGTGATATCATATGAGGTGCAAATCTGGTAGTGCGGTTTTACTCTTGAATTTGAG # Right flank : CCTACGTAAGTGGTAAACCACATGTACCTGTTCAAACCCACCTGAATCTGAGATAATACAAGTATCAAAAACTTTAGTTGAAGTTTTTGCAACTTGCGAAAGGTGGTATGAACGATGGACACACAGGTAGTAAAACAGAATGTACAAATGTCTCAATGGGCGGGAATAATCCAGGATAGGATTACTTCAGGGAAAACGATCACTGAGTATTGTGATTTGCATGGTATCACAAGGACTAAATACTACTATTGGCTCCGAAAACTAAGAAAGTCAGCCATAGATAACAATCCTACTGCATTTGCTGAGCTGACTCCACCGAAGGACGAAGCTAAATCAATTACGACTGGACCACGCATTGACTACAATGCTCAGGTGGAACTTTATGTAGCAGGCGTACGCATTGTTATCAACGAGTCTACACCAAGAGATTTGTTGAAGATGGTGTTGGAGGTGGTTTCCGATGCTGAATGATGCGCATGGCCTGGACCATGTATATATCG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTAGTGCAATCTCATATGGTAGCTGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 129-1220 **** Predicted by CRISPRDetect 2.4 *** >NZ_SNXO01000074.1 Aminicella lysinilytica strain DSM 28287 Ga0310519_174, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 129 36 100.0 30 .................................... GCGTGTCAGGATCAGCGGCGTTGTCTGCGT 195 36 100.0 30 .................................... ACTCTCTGTTGACTTGCTTGCCTCTTGCTT 261 36 100.0 30 .................................... AAGATAGCATTTGACGACGCAATAAGCAGC 327 36 100.0 30 .................................... TCACTCAAATATTATCGGCAGCGTACACTA 393 36 100.0 30 .................................... AACTATACGCTCAAACACACGTTCAAACCG 459 36 100.0 30 .................................... TCACTCAAATATTATCGGCAGCGTACACTA 525 36 100.0 30 .................................... AACTATACGCTCAAACACACGTTCAAACCG 591 36 100.0 30 .................................... TAAACCCCCAGCTTACATCAAGTAAAACTG 657 36 100.0 30 .................................... CTTGTCTTGACAATATTGGCTATGCCGTTT 723 36 100.0 30 .................................... CGATTTGTTTCAAAAGAATACGATGATGCG 789 36 100.0 30 .................................... CTTATCATTTTGCAGTTACCCCCATAATTA 855 36 100.0 30 .................................... TTATGTACACTTGGCCTGGTGTTCGCTCTG 921 36 100.0 30 .................................... TCTAATGGTTCCGCTCTGGTACCGTTCCTT 987 36 100.0 30 .................................... TTCTCATTTTTCTTCGCCTCCAATCCCCTT 1053 36 100.0 30 .................................... ACTGTACGTAAGCGGTGTAAATCAATCAGC 1119 36 100.0 30 .................................... TGTAATCGTAAGAAAGGTGGCAAAGTAATG 1185 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 100.0 30 GTTTGAGAGTAGTGCAATCTCATATGGTAGCTGAAC # Left flank : CTGAAAACTGCTTCAAAACCAAATAGCCTTAGCTAAAATCGCCGCCCTTCCGGGCGGCCTAATTATTATCCAGTACATGTGGTTTACCACTTACGAACCTACAGGAAGATAGAATACATCGCCGACTTG # Right flank : CTACAGTACGCTTACAAGGGCTTCGCTAAGCGTTGTATATGTCAACTGAAAAATGGTCCACAATCTGATTGAAAGTAAGTGGTAAACCACATGTACTGGATTACTGTTAAATTAGTGGGCTAAGCAATATGTTTGGAGAATTGATAAATGAATACTAAACTTAATTATGGCAATGAACCTTCGCAGTTCGGGATTCTGCGGCTGCCGGAGGATGTTGAAGAGGGTAGCAGGCTTCCGCTGGTGGTCATGTTCCACGGCGGGTTCTGGCGGGCTGAGTATGGCCTCGATGGAATCTCGCCTTTGGCACGTGATCTGGCACAAAGGGGCTGCGCCACATGGAATGTGGAGTATCGATGTGTCGGTGAGACGGGTGGCGGCTGGCCGGGTACTTTTGACGATGCGGAGAATGCGGTGAATTTTGTGCCTGAGCTAGCAAAAAAATACCCCATAGACCCAGCGCGCGTGGTTATACTGGGCCATTCGGCCGGCGGGCATCTGGC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTAGTGCAATCTCATATGGTAGCTGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //