Array 1 380559-380067 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKWT010000001.1 Massilioclostridium coli isolate MGYG-HGUT-01560, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ==================================== ================== 380558 31 100.0 35 ............................... TTTCTTCCGTTAGTTTATGACCAATTTCTCTTTTT 380492 31 100.0 34 ............................... TCATTATTCGCATCCTCCTTTTGCTGATCTGTAA 380427 31 100.0 35 ............................... TAGCTCTATGTATAACCCATGATATGCACCACGGG 380361 31 100.0 36 ............................... TCTTTCGATTAAAATAATTTACACTAAAAAGAACAG 380294 31 100.0 34 ............................... TTACACCCCAGAAGGCCAGGAACGCCAGGCGGAT 380229 31 100.0 34 ............................... ACTGAAGTAAGTAAAGCAAATATGAACCAAAGTG 380164 31 100.0 36 ............................... CTTAGCCATTTTTCCTGTCTCCCAAAATGAGAGCGA 380097 31 83.9 0 ........................G.A.TCT | ========== ====== ====== ====== =============================== ==================================== ================== 8 31 98.0 35 GTTACAATACACACCCGCCAGGGTACGGAAA # Left flank : TGCAAATGGACAAAAAGGGCTTTATTTTATAAAAATCACCAATGATATCCAAGGAGGAGTTCCATAAAAATTCCCAATTTCACTATTGAGCATAGCAAGCTGTCCATAGTCTAATAATGGAAAATTTCCAGCAGAGCAACGCTTCCTCCTCACAAGACATGTAACACACCTTAGCAGTGGATAATTAAACCGTAAAAACTAAAAAATATAGCTGGATAGAATCGTCTATCAAAAATTGCTTGCACTTTTTAACATTTAAGATTATAATAAACAGAGATAAAATTTTTGATTAAATAAAGATTATTATATCCAATTTTAAACATCATTGCCAGTGCGAATGGTAAGTAACCATAAAAAATACGTATTGTTCGCACTAGCTATAACTTGTAGCTTTGTGAGTAACAAGTCGATTTATTTAGGTTAAAAGGAAAGTGGAAATGATCAAGTTCGCACTATAATGGCTGTGAACCCCCGAAAATCAAGGGCGCATTCATGCCGCA # Right flank : CATTAGATTAGAGATACACCATCTCGAAAAGAAGCTTTTTAACCCTTTTTATCTCCACATTAAAAAGCTACTGATAAGTTTAAGATTAAGCCTTCCATGGATGACAGATCACATTTTAGGCAGCAAAAAAGCTGGTATTACAATTTTGTAATGCCAGCTTTTTTGCGTTGTCCATATAGATAATTGTTATGCCACTCCACCTTATACAATAACCCAAAATCGAACATAGACCTTTTTCCTACAAAATATAAAGGTAAGCTAAATGAAATATTCCTAGATTTTTATCGTGTTTTTTTATTGTAGTATCAATAAATGATTGAAAGTAAGGAAAAGTAAATTTATCTTTTGCTATAAAATTATACCAAGAAATCAATTCATTTCATTCTTTCTTATTGATGTATTCTTCTTTTAATATTGAAAAACACAGGTGGTCTTTTATATCAGTTGGGGAAACTTGCTCTGCCATACGTAAATACCCCTCATAATAAAATCCAGATTTC # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTACAATACACACCCGCCAGGGTACGGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.70,-5.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 968218-969122 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKWT010000001.1 Massilioclostridium coli isolate MGYG-HGUT-01560, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 968218 33 100.0 36 ................................. AATAAAATTGTTAACCACAGTGGATGTCTTGCCTTT 968287 33 100.0 33 ................................. ACGTGAAACACTACCTTGTAATAGACAATGCCA 968353 33 100.0 33 ................................. AAAGTTTTATAATTTATTTTGTTAGGTTGAAAC 968419 33 100.0 37 ................................. TTTTGGTTGATATGACAGGGTTTAAGCAATTACGCAG 968489 33 100.0 33 ................................. TTCCATTGGCAAGTTATTCCCGCTGCTACTACA 968555 33 100.0 34 ................................. TTTCCGGCAGCCCCGCAGGAATTTATCCAACCGT 968622 33 100.0 35 ................................. TATCGCCGCTATAATGTTATTAATTCCCTTGTTGG 968690 33 100.0 34 ................................. AATAGGGATACTATCTCCGTAAGCCGACCATACA 968757 33 100.0 33 ................................. ATCGTTAAGGTTCTTCATCTCTTTTCGTAAGTT 968823 33 100.0 33 ................................. CATCATTGCTTTTGTAGGTAGCATTACCGATAA 968889 33 100.0 34 ................................. TCCAATCGTATCGAAATCCAAACAGTCAATAAAA 968956 33 100.0 33 ................................. AGATTGGCTGGACAATTGGTGAGATCAGCCAGA 969022 33 97.0 35 ..............A.................. ATTGAACTTGGGGCGAAATATATTCCATTGCCCAG 969090 33 93.9 0 .................T......A........ | ========== ====== ====== ====== ================================= ===================================== ================== 14 33 99.4 34 GTCGCTGCCCCCACGGGCAGCGTGGATTGAAAT # Left flank : TTTGAAATCAATGGTGGATATGTAGCGGATACACCTGGATTTTCCACGGTGGATACTATGCAATACGAAGTGATTACAAAAGAGGAATTACAGTATTGTTTCCGAGAATTTACTCCTTTTTTAAACCAATGTAAATTTACGGGATGTTCTCATACAGTAGAAAAAGGCTGTGCAGTGCTGGCAGCGCTTCAGCGTGGGGAAATTGGAATTACCCGCCATGAGAGTTATTGTCAGATGTATGAGGAAGCAAAAACAATCAAAGAGTGGGAACTGAAAAAATAATATTTTGAATTTGTGCATTTAAATTATTTTTCAATGTTTCTAAAATAGGTGTTTTAGAGAGAATAATCGTTGGTGCGAACCATAAGCTCTCATAAATTTTCTATGCGTTCGCACTAAAAAATGCGGAATATGGTAAACATCTACCTTGATTCAATGGTAATATTATATTATCATTTCAATATTTAGGGTGAAAATTTTATAACTTACTATATTTTGCG # Right flank : TTACAAAAATGCTCTTCCCAATGAAATTCCGCACAGTATTGTTGTTCTTATGGCCAATATAGAATAACCATACGCAGAGGTATGAGATGAGAGAGGTTTTCTTTACGTAAATATGAAAAAACTCCTAATGATTTGTTCCATTAGGAGTTTTTTATTATAACTTGATTATTTTAAATATTTAGAGAATGCTTTTTTCGGGTTGGATGATACGTTGTGTAGGAAATAAAGCAACCATACCAGAAAGCAAATAAGAGCCAACCACTGGTTTAACAGGCTCAATCCTGTTCCGACTACAAAGATAATAGATGAAACCACAAAAATGATCGCATGTCCTTTGCTAATTTTCTTTTTATCATATTGTTTTTGTTCTTCCTCACTTAAGGTATTAAAACCGGCAACCAAACCGGCAGCTTTTTCCCGCCCAATGAAAAAAGGCAAGGAAATCAATAACATTGTAATAGCCATAAGGACGCAGATTATTGTGCCAATATGGGTGGATA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTGCCCCCACGGGCAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCTCCCCCCACGGGAGCGTGGATAGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-8.00,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 1144611-1140960 **** Predicted by CRISPRDetect 2.4 *** >NZ_CABKWT010000001.1 Massilioclostridium coli isolate MGYG-HGUT-01560, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 1144610 33 100.0 35 ................................. CCATTTTTCCTCTTGAAACCGGATGCGGAAGGCTG 1144542 33 100.0 34 ................................. TATCTTTTCCTCCAAAAATGGATGCTTGATCACC 1144475 33 100.0 35 ................................. CTCCCCTGTAACTGGTTCCACGTATGCCTGGCATT 1144407 33 100.0 34 ................................. CAGATAGTTGCCCCTGCTCACCCCAAACGCCGCT 1144340 33 100.0 34 ................................. CTGATTTCAGCGTGATAACCTGTAATCGCCATTT 1144273 33 100.0 34 ................................. ATATCCTGTTTTCTCTTTAATAAAACTATCCAAT 1144206 33 100.0 35 ................................. TAAAAACTGAAAATAAAAAGCGTCCGCCATTGTAA 1144138 33 100.0 35 ................................. TTGTGGACATAAATGGTAGGTCTTGGACTGCTACA 1144070 33 100.0 34 ................................. ATTGCTAAGTATTGCTGGTTGATTCAACATAATT 1144003 33 100.0 34 ................................. ATTACACACTTACACCCACCGCCCCTGTATCTGG 1143936 33 100.0 33 ................................. GCTATTATACCCATAAAGTAGCATCCGTTTATG 1143870 33 100.0 33 ................................. ATATTTTCACATCCATTTCTTAAATTTCGTCAA 1143804 33 100.0 33 ................................. GAAATCGCAAATAAAAACGAGAGCTCAATATAA 1143738 33 100.0 35 ................................. AGAAGTTAAAATAGGAGAGGAGGGAGCCCCCGTTG 1143670 33 100.0 34 ................................. TTTTTATTCCTTGTCCAATTTCATTTTTTTCCCA 1143603 33 100.0 34 ................................. AATTAAACAACTTTCACCATATATTTCCGGTGCA 1143536 33 100.0 33 ................................. TCAATTGTGTCCTGTCTTGTGCAAGTATGCACT 1143470 33 100.0 34 ................................. AATATGCCATTAAAAGAAGTAAGACAGTTTATAG 1143403 33 100.0 33 ................................. TAAATCAATATTTGTTAAGCACATTGTAATATA 1143337 33 100.0 34 ................................. TAAATTCAACACTTATATTAGTCCCAAACATTTT 1143270 33 100.0 33 ................................. ATTTTTTAACCTCCTTATTCAATATGTCATTAA 1143204 33 100.0 33 ................................. TATAAAATGTTAAATATTATTAATATTTAATAA 1143138 33 100.0 33 ................................. ATGCTTGTTATAGGATTGTACTAATTGATAAAG 1143072 33 100.0 35 ................................. AATTTTAGCCGTAGAAAGAGGAATTGCTGTTCCCG 1143004 33 100.0 34 ................................. TATGAAAAAAATTACACGATGTGTACACTCTTAT 1142937 33 100.0 35 ................................. ACCTTCTAAATGCAAACTATCCGTGTCAGCATATA 1142869 33 100.0 33 ................................. ATTAATGGAAATGTGCAAAAAAGACAAAAACAA 1142803 33 100.0 33 ................................. AACAAGTAATTAAAAACATTGTTAGAGATTCTA 1142737 33 100.0 34 ................................. AACAAGTAATTAAAAACATTGTTAGAGATTCTAA 1142670 33 100.0 34 ................................. AATGATTTGTAATTCATTCATCATGCTACCTCCG 1142603 33 100.0 34 ................................. TAAGTAAAAACGATAAAGATATTTGTACTAGGAA 1142536 33 100.0 35 ................................. AATTCCTACCGGGTTTTCTCATGTCCATTATTCAA 1142468 33 100.0 34 ................................. CAGTTACAAGGCACGTTTCAAGGCGCACAGTTGG 1142401 33 100.0 34 ................................. TGGAATTGCAGCAAAATATGGGACAAGCTACCAG 1142334 33 100.0 37 ................................. TTTGGTAATTTTTTTGTTTTGTCTAACGAAAAAACAG 1142264 33 100.0 34 ................................. ATTTATGGTCATTTGCTTGCCCCCATTACACATT 1142197 33 100.0 36 ................................. ATTTTTACGTTCCTCCGTCTTGGTTTTCTCTATGTC 1142128 33 100.0 34 ................................. TATGAAAAAAATTACACGATGTGTACACTCTTAT 1142061 33 100.0 35 ................................. ACCTTCTAAATGCAAACTATCCGTGTCAGCATATA 1141993 33 100.0 33 ................................. ATTAATGGAAATGTGCAAAAAAGACAAAAACAA 1141927 33 100.0 33 ................................. AACAAGTAATTAAAAACATTGTTAGAGATTCTA 1141861 33 100.0 34 ................................. AACAAGTAATTAAAAACATTGTTAGAGATTCTAA 1141794 33 100.0 34 ................................. CTAAAATCGCTGTTAAAAACTCACGGATAGAGCA 1141727 33 100.0 33 ................................. AAATTGTGGGGTAGCTTTCGCTCCAATTTTTCC 1141661 33 100.0 35 ................................. AAAAAATCTTCGGACGCAGTTTTAAGCTTATCGCC 1141593 33 100.0 34 ................................. AACTCCTTGTTGTACAGGTCCTTGCCATCCTTTG 1141526 33 100.0 34 ................................. ATCTAAAATGTATTCTCTTGTAGAATTTAAAAAT 1141459 33 100.0 34 ................................. TTGGCCACAATGTTGATTATGTAGCGTGATGAGT 1141392 33 100.0 33 ................................. CCCTGGAGATAATAGAGATTATCATCTTGTGGT 1141326 33 100.0 34 ................................. TAAAATCTCAAGAAAATGGTAATAAATAAGTTGG 1141259 33 100.0 33 ................................. GATGTCGTATAAATAGATATTAACCATAATTAC 1141193 33 100.0 35 ................................. TTATCGTTATCTTTATTTTATCACATTTAATACAA 1141125 33 100.0 33 ................................. TTTTATATTATTACGGATAACCGTAATAATGTC 1141059 33 97.0 34 ..............A.................. TATTTTATCAAAATCAATATAACAATAAAGTATA 1140992 33 90.9 0 ..........C........A........A.... | ========== ====== ====== ====== ================================= ===================================== ================== 55 33 99.8 34 GTCGCTGCCCACACGGGCAGCGTGGATTGAAAT # Left flank : GGATGAATACCCGGTGTTCTTATGGAAATAGGAGGGGACAATGCTGATTTTAATCACCTATGATGTGAATACTGAAACAGAAGCGGGCAAAAAGCGCCTGCGTAAGGTGGCAAAAGAATGTGAAAATTACGGCCAACGGGTGCAGAACTCTGTATTTGAATGTATCATGGATGCAGCCAAAAGCCGTGAAGTAAAAGAGAAGCTCCTCCGTCATATTGACGAGAAAAAAGATAGTCTCCGCTTCTATTATTTAGGAGAACAGTATCAGAAAAAAGTGGAACATTACGGGGTGAAAGATAGCCTGGAACTGGAAGGGGAGCTCTTAATTTAAGCTTGTGGGTTGGTGCGAACCATAAGCTCTCATAGAAACCTCGTGTATTCGCACCAGAAAATGCGGAATATGGCAAAAATACATCCTAATTAAGCGGTGTAATTTTGATGTTATCAGAACATTGCCGCAATATCTAGGTTGTAGTTTCTCATTATTGCCATATTTTGCG # Right flank : TGTTCCTCGATTTTCATCTTGTGAAGGTCTGTTATTTTATTGTTGACATATAGGCAATGTGGATCGAAAGGATGAGCTGGCAATCGGGTTGAAGTTTTATCATATGCATTCTAAAAGTAAAAACACGGTATCCATTTGTTGGAAACCGTGTTTTTTATGCCCGTTTTCTATGTTCTGCCAGCAAAGAAATCAACAGATAAATTCCAAATGCCAACAGGGTGAAATTCAAATAATACGCTAAATATCCTCCAAAAATAAGCAACAATAGGCAGAATCCCCAGGAGCATATCTGAACGGACCGATAGGCAAGGTGGAACGGGAAGATACATTGGAACAGCAATTCCAATAATTTCCCTCCATCTAGGGACTTTACCGGGAGAAGGTTAAAACAGCCAATTAGTAGATGGATGCTGGCAAACAGATTTTGTTGCACTGCCAGATGGAGGAAGAACGCCAGAAAATTTACCCCGCTGCCCGCCAGAAGAATCACTGCTTCCTGC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTGCCCACACGGGCAGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-8.80,-8.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA //