Array 1 85101-88475 **** Predicted by CRISPRDetect 2.4 *** >NZ_QRWB01000001.1 Bifidobacterium pseudocatenulatum strain AF20-20AC AF20-20AC.Scaf1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 85101 36 100.0 34 .................................... AACCAGTTGACGTCCACCGCGCCGCTGATGCCGC 85171 36 100.0 37 .................................... ATCAGAGACGATGCGCGTCTTGCACCCTGCTGCGCAA 85244 36 100.0 38 .................................... TGGTTCGCGAGGCTTCCGACAAAGGAATCACCTTGCAC 85318 36 100.0 35 .................................... TATCGTTCGCAGGCGCATTACGACACGTATGGCCG 85389 36 100.0 36 .................................... TTGATGGTGGTGCCACTCATGGTGCCGGACGCGAAA 85461 36 100.0 39 .................................... CGAAATACCGCTGGAAGCAAGGTCAGTCAGCGGACTGAT 85536 36 100.0 37 .................................... TTTGCCATAGTACAGTCGGTAAACTCGATACCATCCA 85609 36 100.0 37 .................................... TTGCAAGCGCCGTCCGAAACTCCACTGCGCAATACCG 85682 36 100.0 39 .................................... AGGCTTGACATTGGCGCTCAGCAAGCGAATCAGCAACAA 85757 36 100.0 36 .................................... AAAAAAGGCGAAACCGTGACCGTCGAAGACTTCGAC 85829 36 100.0 35 .................................... TGATTGATCCGTAAGCTTTGCCGCATTTCTGGCAG 85900 36 100.0 35 .................................... GGCGACCAGTCGCACGACCATTCAGAGGCCGTCCG 85971 36 100.0 37 .................................... GTGGAATGCGCTCACTGCGGCGAGGTTGTCGGCACAT 86044 36 100.0 36 .................................... TAGACGGAACAGCCGTCCGTCTCCTGTTCGAAGATT 86116 36 100.0 37 .................................... CGGAAAAGTGTGGGCAAAATGTGGGCACGGCTCACCA 86189 36 100.0 36 .................................... TATGACAAATTCCCACAACTCGAATCGGACACCAAA 86261 36 100.0 37 .................................... CCCAACGCCGTGCATCTCGTGTCCGACTGGACCGAAG 86334 36 100.0 36 .................................... TTGGGTGACGACGTGTATGGCCGTTATTCGCTGCCG 86406 36 100.0 38 .................................... TCAATGACACGCTCAGCTCACAAAAAATGAGAGAAGGC 86480 36 100.0 36 .................................... GCGCGTGTATTCGGGCATCTCGTGGTAAAGGCGGCG 86552 36 100.0 36 .................................... ATCGACCCAGCTCACCCCGAGATCGACCAGACCGTT 86624 36 100.0 36 .................................... GTTTCCTCCGTGGAGTATTTGCATCCGCCGCTGACT 86696 36 100.0 36 .................................... GGGCTTGATGTCCTGCCATCCGTGAGCGCACCATAC 86768 36 100.0 39 .................................... TTCCGTGGCGAACGCTGGCAATGGGACGCATACGCGACG 86843 36 100.0 36 .................................... TCCATAGGCCTCATCTACGGCGGCCAGGCGAAGACA 86915 36 100.0 36 .................................... ATTCCCGGATACAATGCGGCAGGCGCGGACACTACG 86987 36 100.0 37 .................................... AGCAATCCGGTTCGCCCACAGCCTCTGGAAGGCTGAG 87060 36 100.0 36 .................................... CATCTTGTATTCGCGGCGTGACATGAATAGCCCGAA 87132 36 100.0 38 .................................... GCGCCGACGAGAGACAGCTACCTGCCGACCACGTTGAG 87206 36 97.2 37 ...............................A.... CTCGCAGACCTGCTGACCGGACGCCGCATCATCCCAC 87279 36 100.0 34 .................................... TGAACGCGGTGCTTTTCCGACTATTAGAGGGGGG 87349 36 100.0 37 .................................... CTAGATCTGCCCGAAGGACTGGATACGGGCAAATGCA 87422 36 100.0 36 .................................... CCGGAACAGCCGCAGCTCGACCCGACGCTGACCGAC 87494 36 100.0 38 .................................... GGCATCGATTTGACCATGTTTGACGTTTCTGGAGGTGT 87568 36 100.0 39 .................................... GCCGCGCTGATCGTACTCGCGTAAAATGTTGAGCAGTTG 87643 36 100.0 38 .................................... GACCAACGTGTGGCCGAGATCACCGGCACGACGGGCGA 87717 36 100.0 38 .................................... GGTCAGCCATCGGTCACCCCTGAAAATGTTTCGCGCGG 87791 36 100.0 35 .................................... CGGGACACTTTGACCGTGCTCGGGTATGTGCAGGA 87862 36 97.2 35 ........................A........... AATGCAATGAGCTGGGTTACCCCATGGCGAGACTC 87933 36 100.0 34 .................................... GAAGAGCATGGAGGGTTTAATCGTTCATGTTGAT 88003 36 100.0 35 .................................... ACACTGCGTTGCGGCATGGCTTGCTCCTTGTTCCA 88074 36 100.0 35 .................................... TTGGACTGGGCAAGTTGGTCCTCAATCTGTTTACG 88145 36 100.0 37 .................................... GAGGTAGCCAGAACGGCGACGGCGTGTTCGCCAACGC 88218 36 97.2 41 ..............T..................... AAGGACCGCACCTTCTTGTACCGCCTCGACTCGTCCGTGAT 88295 36 100.0 37 .................................... ATATCAGCATAAGGACACTCGCCACATGTCCAAGAAT 88368 36 100.0 36 .................................... GCGGAAATCACCGACCGAATCCACCAACTACAGGAA 88440 36 94.4 0 ..................................AG | ========== ====== ====== ====== ==================================== ========================================= ================== 47 36 99.7 37 ATTCCTGAGCTAATCAGCTCAGGACTTCATTGAGGA # Left flank : GATGATAGACGTCGTGATCACGTGGCAAAAATATTACGGCGCTATGGCGAGAGGTTGCAGTATAGCGTGTTCTTTCTGCGGATTCGGCCTGCGAAAATGCTGGTTGTCCAGAATCTAATAGAAGTTAAAATCGATGGTTCAACGGATTCAGTTGTTGTCTGTTTTCTCGGAAAAGAAGAGCAGGCAAGAGAGGGAATGTCATTCTTGGGACGACGGGAATACAGTGATTTAACCATTCCGACGGTTATCTGATTTCACTTTAACCTCTCTGATTGTCTTTCACCTATGTGATTGTGGCTTGATAATTCAAAAGGTTTTTTATGAATTTTGGAATACGAGAGGTGAACCATTGCTGCGACACGCGATGACCTCTCGCATGAGGAAATATAAGGGTTTATGTCTCTTTTTCTGGTGATAAACTGACTGGAGGGAGAGGTATCTGTTCCGCTCTCGCAAAGTTTTTAATTCGCTTAGTCATTAGAGCGGATTAGAATGAGACC # Right flank : GTCTATTGGCTCTGATTGTCGTTGTGCGCCCTGGCTTGTGAAGCCGCTTTCTGAATTAGGAATAGCTGCTATCAGGGAGGGCAAGAGAACTATGTCAAATTTGACGTAGATTGTGGCATTTTCTGTGGCCAAGTTCGTCCTTGATGAAAGGATTTCTACTTGTAATGTAGTATTGGTGCGTATGATGCTGAGAATTGACGAGCGCGATTTGAGGTCGAAGCTCAATGAGCACAGGAGCCTTATTGGATATGGTTCCAAGGGCGACGGCATCGCCAACATTGTTGCGGGCCTATTCTATATTCCAACAGCATGGACGTTTGCGGAATTGCCGATGCGGGCGCGATGCTTATTTGCTGTGCTGGGTGTTGTGATAATTGCGTTGGGTGTCGCGAGTATTGTATGCAAGGGACTCACTTCCGAAAAACTATATAAGGAAATCGAATCGATGAACAGAAGAGCTAGCTCTCTCATTGCGGTCAAGGATGGCATGGACGCGCTGT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCCTGAGCTAATCAGCTCAGGACTTCATTGAGGA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.10,-7.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //