Array 1 116223-115700 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMWO01000048.1 Nitrosomonas mobilis isolate 1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 116222 37 100.0 33 ..................................... ATTAAATTGAGTTTAGATTCGGTTGGATTGGTT 116152 37 100.0 35 ..................................... GTATGCTCACGACGCCATTAAGTGAGCCAATATGC 116080 37 100.0 31 ..................................... CGTAAAGCCGTGACGAGCGACAGAACAAGAT 116012 37 97.3 33 G.................................... TCCTAGTCCACTTTCGTATGCATCACATATTTC 115942 37 100.0 32 ..................................... ACCATGCTTAACTCCCTAAATGAGATACTCAT 115873 37 100.0 32 ..................................... CTTAACAAATACTCTCTATCTTCGATACGCTG 115804 37 100.0 31 ..................................... CCTGTTATTGTTATAGGATTCTCCGTTGCCA 115736 37 91.9 0 C...................C.............A.. | ========== ====== ====== ====== ===================================== =================================== ================== 8 37 98.6 33 AGAAGCACCCATGCCCTGATTTCAAAGGGATTGAGAC # Left flank : ACCCGCGACGGCTGGCGCGCTTGCATCGCTATCTGGTAAAACGTGCCGTACCGTTGCAACATTCTGTATTTTTGTTTAGCGGAGATGATCGCCAGCTTGAACACTGTATGCAGGGGGCAATTGAACTGATTGATGAAAAAGAGGATGATTTGCGTGTTTACCCGTTGCCGAATCGTGGACTGAAGGCTCGCATCGGTCAACCCGCCTTGCCGGAAGGCATCCAATGGAGTGGATTGCCCACCGCGTGGTAGCGCACAGCTTTCCTGAAACGGTCAATCGCCTGAACAGAAAGCCAGATCAGTTACAGTTCGCTCTTGTAAATATGGCAGGATCGTTCAAAATATCGAAAAATGAACTAACTCCAGGATATATAAACTTTGCCGATTGTTGTACTAATGAAGTAAATCACCAATTTACAGGATATATCTTGCAACCGCTTATCATTTTTCCTCCGCACCATTTTCAATATATTGATTGTAAAGAGATAAATGGTGGTGATC # Right flank : TATCCGCGTAGTACCGCTACGTACATACATGAAGGCGTGAATGTCATATAGTGAAAATCCAGCCCCCACGCTCGTTGTGTCGAAAATGAACAACGGAAAGAAAAGCTCCTTGATGTTCTTTACGTTGCTGAACAAGCAGCCAGGAAGTCCTTCCGCGCAACAAAAGCTCATAGGAATCTTTTGCTGTCAGTTATTGAGGATTGTGAACTACACGTTGCCGCAGGTGTAATTAGCGTGCCATCTGGGAAATCAGAACGCTAAAGTGTAACTTTTAAGGTTCTGTCGCATTAAGCAAGATCATCGACACATTCGATGTAGCGTGTTGACTATTAAAGAGATGACAACGCTACATGCTTATTGTTAAAAGGATGCCGTTTCCGGTTGATATAATTCTGGCTTGCATCCGCTGGTACGCAGCGTATCCGTCAAGTTGTCCGCACCTGGAAGAGATGATGGAGGAGCGTGGCGTATCTGTAGATCATTCTACAGCGAGCCGTTGG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGAAGCACCCATGCCCTGATTTCAAAGGGATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [56.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA // Array 1 108162-109908 **** Predicted by CRISPRDetect 2.4 *** >NZ_FMWO01000032.1 Nitrosomonas mobilis isolate 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 108162 37 100.0 34 ..................................... CCCCGCTAATGCCGCTGTCGGTTCTGCGAACATG 108233 37 100.0 35 ..................................... AAAAGACAATGTATATCTTAATTCCTGCATTGTTA 108305 37 100.0 35 ..................................... TCAGTAACACGTAAAGTTAGTCTCACTTCTGAAAC 108377 37 100.0 33 ..................................... CTGCATAATGAGTATTACTTTGATAACTGCTGT 108447 37 100.0 36 ..................................... TCCTTTCCTGTGCACTTTGTACCCAGTCTTCCATTT 108520 37 100.0 34 ..................................... ACAAGGTGGCGTTAACGCCGAGCAAAATAGATTA 108591 37 100.0 35 ..................................... ATACGCTGTGTTAAAGAATTCCTTCGTGTACGCCG 108663 37 100.0 34 ..................................... CCGTTATCTGATGAGTTGGCGGTGGGCGCGGTGT 108734 37 100.0 34 ..................................... TCTCCTTTTCGACATTTATTTTGCGCATCATGTA 108805 37 100.0 33 ..................................... ACCTATCGCATGACGGCCGGTAATTATGTCAAT 108875 37 100.0 35 ..................................... CTGTATTTTGCCGTTATAACGGACAAACTTTTTAA 108947 37 100.0 35 ..................................... CATGATGCAAACCGCCATGGATGCGGCCCAAAACT 109019 37 100.0 34 ..................................... ATTTGTCTGCTTTGCATGATGCGTCCGTTCTGGA 109090 37 100.0 34 ..................................... GAATTATCTGTAATTGTTACAGTTGTAGTTGTAG 109161 37 100.0 34 ..................................... ACTGAAGTGGGCTAACTTTGACAAGTGAAAGAAA 109232 37 100.0 34 ..................................... AACCATGCGCAGATTAGGATACAAATCAACACCA 109303 37 100.0 34 ..................................... TCTTTCGAACCAATAGGCTGATTATTAGCATCAA 109374 37 100.0 34 ..................................... ATAATCTTTTCGGTTCTGACGATTTAATAGGTTT 109445 37 100.0 35 ..................................... TTTAATACTTTTGACGCTGCTTTATCTGCTGCGGG 109517 37 100.0 34 ..................................... GACACAGCAAACGCATTTGTTGCATTCCGACATA 109588 37 100.0 33 ..................................... AACGCAGCAACAACGCATGTTCCGACGTTGACC 109658 37 100.0 34 ..................................... ATAACAGCCAGGGGTGAATTTAAGGAATTTATAA 109729 37 100.0 35 ..................................... CCGCGAAACTATGCAGCCCTGGCACTACTCAGCCC 109801 37 100.0 34 ..................................... TCGTATTGGGTTTGATGTTGATGGTGTAGAGCTT 109872 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ==================================== ================== 25 37 100.0 34 GCAGCGCCCGGCCAACCAGCCGGGCGAGGATTGAAAC # Left flank : GCACTATCTGCCATTCCTCGTAAGGTAACCATGCTGATCATCGTCACCTATGATGTCTCGACTGAAACCCGTGCAGGTCGCAGGCGGCTGCGTCGCGTGGCCAAAGTGTGTGAAAGCATGGGACAACGTGTGCAAAAATCCGTGTTTGAATGCCGTGTCGATCTGATGCAGCTCGAACAGCTTGAACGCCGCCTGCTAGCCGAAATCGATGAAGAAGAGGATAATCTGCGCCTGTACCGTTTGACCGAACCCGTTGATCTCCATGTCAGGGAATACGGCAAATTCAAGGCAATCAACTTCGAAGAACCACTTATTATCTAAAATACGCGAACCCAAAGCAGCGAGAAAAACCCAATGGTTCCGCGCAAGCCCTAACAGTATGAGAATAAATCCTATTTTTTTGAAAAATAGACTTATTATGCAAAATGAGTTTGTGAAAACTACTGGTTCGCGCAAACCAACCTTTTTGTACTGCTATATCCAAGTGTTGTAGCGGTACT # Right flank : CATATCAAAACCCCGAAATCAAATCAACATCAAAACCGCAGCACCCGGCCATCCAATTAATGTTGTTAACAGATGAAAGGTGTTGCGACTAAGGTGCCAGCAATTGGACAGGCGCTTTGTTCCCAATGCTCTGCATTGAGAGCTTCAGGTTTTGATAATTTTTATAGACAAGGCCTCCAGCTTGTTGTCAGACGCTTCATCCTCAACCCATATCAGTTTTTCATTTTTTGCAACCATACCGGTTGCAACCAGCCATCCGGTGGCTTTGCCGACAACGCCGTTTTCGACATTATCGAGATTTATCGGATGGACGCCGTAAGACAGGGATAGGAGGTTGTTCGTTCTTTCATCGCCGCCATGCGACAGTATCCAGCTCTCAGGTCTGAATCTGGAAATCAGACAGGGCGCGGCTCTTCCCTGCGAACGGGTCAGAATGTAACGCACATTCAAAGCATCGGCGGATTCAACTGCGTTCAGTGTGACGATATCTTCCACGGTGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCAGCGCCCGGCCAACCAGCCGGGCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [9,2] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-16.10,-17.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.37 Confidence: HIGH] # Array family : NA //