Array 1 1-151 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAMX01000049.1 Acetobacter orientalis strain 21F-2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ =================================== ================== 1 28 100.0 35 ............................ AAAGGACGCCATCATGATGGCGCAATACGCGCCGA 64 28 100.0 32 ............................ CCCCGGAAATCCGCCAGTTCCGGGTTCGCCTG 124 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ =================================== ================== 3 28 100.0 38 CTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : | # Right flank : AA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-3.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 2686-2177 **** Predicted by CRISPRDetect 2.4 *** >NZ_BAMX01000026.1 Acetobacter orientalis strain 21F-2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 2685 28 96.4 32 .................T.......... TGTCCGTAATCAACACGGCGCAAGGCACCCTG 2625 28 100.0 32 ............................ GGACACGATTGCACCCGCAGGATATCCGCCGA 2565 28 100.0 32 ............................ TAGACCGCGCGTAAAGTTGGTCAGCGGGTTGT 2505 28 100.0 32 ............................ ATAAGGCCAAGCGCACCTTCGCCCATGCCGAT 2445 28 96.4 32 .........................C.. GGCGCAACGGGCGCAACATGGCAGAGCCTGTT 2385 28 100.0 32 ............................ ACCCAGCGCACCAAGGGCCGCACTGTCGATGT 2325 28 100.0 33 ............................ AGAGGCAGCGCTGGCACCGATCAGCGTGCCAAA 2264 28 100.0 32 ............................ CAAAACTCCCGCGCCACAGGGACTTTGCGGGC 2204 28 78.6 0 T...................T.T.T.TG | ========== ====== ====== ====== ============================ ================================= ================== 9 28 96.8 32 CTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : GGCTTATGGAGCGCTTTCTGTAGGCGAATTGCTTATTAGCGCGCTTGGCCTTGCCGTGGTGGCCCGCTATGTGCCGCTTAATATTGGGGCCTTTATGATGGGCAGCTACTGCGTGTCTAACGGTGTGGCTATGTACCTTGGCAGCATGGTGGCCAATATGGCTGCTGTAAGCGGTGCTGTTGGGGGCGAAACAGTTGCCGCAATGCTGCCTGTGTATGCCAGTTTGTTCCGCTCTCTCTTCTTTTTAGCTGTAGGGTGCACGGTGGTTTTTGTGGTGTGCCTGCCCTTTACACGGCGGTGGGACGCCCAGCACCATGCAGCACTTGGCATTAAAGCTGGCGCAAAGGGGTAAAGTTTACCCCTAAAATACCCCTTTTTTTAGAGCCAAAAATAATCTCTTTAAAATCAGATACTTACAAAACGGCTTGCAAAAAGGGGTAAAAGCGCCAAAATAGGCTGCAAGACGCACAAAACTGCTCTTTTATAACCATATCAGTCTA # Right flank : TGTTGTTAGGGGCTTTTATTGTCTGTTTAGAAAGGTGTAAGCGGGCGAGTGGTGGAGCTGAGGGGAATCGAACCCCTGACCTCCTCATTGCGAACGAGGCGCTCTCCCAACTGAGCTACAGCCCCGCCTGCTTTATTTTGCGTGTACAGAGCGGGGTAAAGCCCTGTCAAGTTTAGGTGGCATGCGGTAAACCGGTTAAACACACGGCATACTCTTATTGCAAAGGAGCAAATATTTGCTGTTTAGCCTTTATATGGTGCTAACGCGCCTGCTGGATATTTATTGCTGGATTTTACTGCTATCGTGCATTTTTATTAATTTGTGCATGTTTGGTATTTTAGACAGCCGTAACCAGCTTGTTTGGAAAGTTGGTGTGTTTTTTAGCCGTGTGACCGAGCCTGTTTTGGGGCCTATACGGCGTATGCTCCCTAATTTGGGAGGGGTAGACTTTAGCCCCATGATTGTGCTGCTGGGCATACAGTACATTGTGCAGCCTTTGC # Questionable array : NO Score: 6.10 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //