Array 1 92912-92716 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK047689.1 Staphylococcus aureus WMCS6114 adFko-supercont1.2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================= =============================== ================== 92911 25 96.0 31 .....................C... AGCTGACAGAAAGTCAGCTTACAATAATGTG 92855 25 100.0 30 ......................... GAATTTCAAAAAGAAATTCTACAGACAATG 92800 25 96.0 31 .....................C... AGGTGACGAAAAGTCAGCATACAATAATGTG AAGG [92789] 92740 25 100.0 0 ......................... | ========== ====== ====== ====== ========================= =============================== ================== 4 25 98.0 31 CAAGTTGGCGGGGCCCCAACATAGA # Left flank : CACTTTGAAATCGATCCTGTAGAACCAAAATATTTTGGGGAAGTAGCAAAATATTATCGCCATAAGGATAATGGTGTTCAATTTGGTTTGATTACAAGTGTTTCACAATCATTTTGTTCTACATGTACACGCGCAAGGCTGTCATCAGATGGGAAGTTTTACGGATGTTTATTTGCAACTGTCGATGGATTTAACGTTAAAGCGTTTATTCGTTCTGGCGTGACCGACGAAGAATTAAAAGAACAATTTAAAGCTTTATGGCAAATAAGAGATGATCGATATTCAGATGAGAGAACTGCTCAAACAGTTGCCAATCGTCAACGTAAAAAGATAAACATGAATTATATTGGTGGTTAATGTGTAGGGACCACTACATATTAAATCATTAGAGATGTTTTAATATTTCTGTCTTACTCCCTAAAATACAATATTATTTATTAAAGTAAAAACGGTCATATCTATGCCAGATTTAATAGAAATGATCGTTTTTAAAGTTTTTA # Right flank : GAATTTCAAAAGAAATTCTACAGACAATGCAAGTTGGGGATCAACGAAATAAATTTTATGAGAATATCATTTCTATCCCACTCTTAAGAATCACTACATAATAAATCTTTAGTGGTTCTTTAACATTGATGTCACACTCCATGCCATTGAGTTGTAATATATCTTTTTTAGGTATAAATGTTGTCGAATAAACAACAAGTTGTCCAAAAGATATAAATCTAAACAAGATATAGCCAGCAATTTAATATTTGTAATAGATAAAATGCTAAGTTTGATATATAATAAATTTAAGTAATTGTATAATAATATGAATTACAAACATCTAAGAAGAAACATAGGAGGCATCATATTATGAGTAATAAAGTTCAACGTTTTATAGAAGCAGAAAGGGAGTTAAGTCAGTTAAAGCACTGGTTAAAAACAACACATAAGATTTCAATTGAAGAATTTGTAGTCCTTTTTAAAGTGTATGAAGCTGAAAAGATTAGCGGTAAAGAATT # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGTTGGCGGGGCCCCAACATAGA # Alternate repeat : CAAGTTGGCGGGGCCCCAACACAGA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-2.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 364054-363861 **** Predicted by CRISPRDetect 2.4 *** >NZ_KK047690.1 Staphylococcus aureus WMCS6114 adFko-supercont1.3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================ ================== 364053 24 100.0 31 ........................ CTTGCATTGCTTGTAGAATTTCTTTTCGAAA 363998 24 100.0 32 ........................ CTTGCATTGTCTGTAGAAATTACGGACCCATT 363942 24 95.8 32 ...................C.... CTTGCACATTATTGTAAGCTGACTTTTCGTCA TA [363923] 363884 24 83.3 0 GCT...T................. | ========== ====== ====== ====== ======================== ================================ ================== 4 24 94.8 32 TTCTCTATGTTGGGGCCCCGCCAA # Left flank : CTTCGAAACAATACTTTATCAATGCCTCAACTGCTTGTGTCATAATCCCATGACCCTCAAATTCTTTATCTAAATAGTACCCTAATGAAGTTTTTCTGTGCATGTGATTAATTTCATGTAAACCGATGACACCAACTAGCGTTCCTTCATACCAAATGCCACACTGAAATCCATTACCATCAGCAAATTGCAAAAGTCCTCTTTTAATAAATGCACGCGTATCTGATGGTTGCTCAGTTGCATCTACCCAAGGTAACCATTCCCTAAGTGAATTTCTTGAACGATTGACTAAATTGAAAAGCGCTTCTGTGTCATGAGCTTCTAAAATTTTTAATGTTATTTGTTCATTCACTTTCATTCCAAACATACCATCACATCCTCATTCATTTTTCATATAATTCTGTAAATTATCATTATAATAACATATTAATGTTACGCATTGTATCTTAAATTTGTTGTCCTTCCCCAACTTGCATTGCTTGTAGAATTTCTTTTCGAAA # Right flank : TAAGCGTTGTAGTGCCTATTACTTTGATTGATGTCCAAGTTTCCTATCACACAACTTAATTTAATCACTACTTTATTATTCATTCCAAATTTATATTTAAAAATACGACAAAACAGTGCTAAAATGCTATTAAAGGAGGCACTGCTCATGGCATCATTGAAAAATAAGCATTTTATGATTGGGCTATCACTAACATTTATAGTCGCATTATTTAGCTTTTTAGCAGCTAAATTGCCAATCCTAGATAAGGTTGGCGCATTAACTATCGCGATATTAATCGCTATTCTATATCGTCACTTTAGAGGATATCCTGAACAATATAGCTCAGGTATTACGTTTTCATCTAAATATTTATTAAGATTTGCAATCATCCTATATGGACTTAAACTCAATATATTCGATATTATCGGTCAAGGTAGTAAACTATTAGCCATCGATGTAGGTGTCGTTATTTTCAGTATTGTAATGATGCTCTTTGTCAACAAACTGTTGCATGGTGA # Questionable array : NO Score: 2.60 # Score Detail : 1:0, 2:0, 3:0, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCTCTATGTTGGGGCCCCGCCAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.60,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.41 Confidence: LOW] # Array family : NA //