Array 1 930535-932286 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHXEV010000005.1 Bifidobacterium pseudocatenulatum strain YIT12189 YIT12189_5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 930535 36 100.0 30 .................................... AGGTCGGAGACGACAAGCTCCCGTTCGTGA 930601 36 100.0 30 .................................... GCATTGCCGACCTTATTCAACCGTGTGACA 930667 36 100.0 30 .................................... ATCTGTGAGTGCCGCCGACGTTCAGACCCG 930733 36 100.0 30 .................................... AACACTGATTCCACCAAGAGCGCACAAGCT 930799 36 100.0 30 .................................... TGGCCACCGGATTGTATTCGCATGTGCGGC 930865 36 100.0 30 .................................... CCTTCACGTCGTCGCGGTCGCCGGCCTGTT 930931 36 100.0 30 .................................... CCGCGCCTCGGAACGTGAAACGGTTCGTGA 930997 36 100.0 30 .................................... TGCTCTCATACGTCATCTGGCCAAAGCTGG 931063 36 100.0 30 .................................... ATTGGGATGACCCGTTGAAGCTTATCGGCT 931129 36 100.0 30 .................................... TTTATTGGCAATTGCTGGAAAATGGGAGCC 931195 36 100.0 30 .................................... TATTCGAACCTGACACCGCCCAGCTTGAAC 931261 36 100.0 30 .................................... AATGGGTGTCCGAAGTCGCCAAAGACAAGG 931327 36 100.0 30 .................................... ACTCGCTTGCGCAAACCAACCTGTCCAATC 931393 36 100.0 30 .................................... ACAGGAAACGCAACGTCGCAAACGCCACAG 931459 36 100.0 30 .................................... ACAGGAAACGCAACGTCGCAAACGCCACAG 931525 36 100.0 30 .................................... TATATCGCTTGGATGTTGCGGCTGATCCAT 931591 36 100.0 30 .................................... GCCTGGACAGCTCTCACACATTGATCCCAG 931657 36 100.0 30 .................................... ACGACGCCGAATTCAAGCGATACGCGAGCC 931723 36 100.0 30 .................................... CTACTACTTCATCACCGGCATCGAATACCT 931789 36 100.0 30 .................................... TGCCACACTCTTGGACTGACATGCGGAATG 931855 36 100.0 30 .................................... TGGTATTCGCGCAGTGATTTCGGGTCGGTG 931921 36 100.0 30 .................................... ACGGTGTGAATATAACTAATAACATATGTT 931987 36 100.0 30 .................................... CAGTTGACGGCAATTCCGGTGTCATGTTGT 932053 36 100.0 30 .................................... CAGTTGACGGCAATTCCGGTGTCATGTTGT 932119 36 100.0 30 .................................... TACCGCTCAACGTGTCACCAGAGCGCACGG 932185 36 100.0 30 .................................... AGGTCGGTGAGAATATCTGGATGTTTAGCG 932251 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 27 36 100.0 30 GTGGTCTAAGTCTTTGATCTGACAGGCATCTGAAAC # Left flank : TTCCCCGCGCCTAGAGGGGACGCCGGTGCGCTCCTCCTCGAGCCGGTCCGCGTACCACGACAGCAACGCGCCCTTGCTGGGATAGCCAAGCTCGCGGATCACGTCGGCGGGCGCAGCGCTCGTATTTGACGTACAGGTCCACGGCCCTGTCACGCTGCTCCCTGCTGTACTTCGCCATAAGGGGTTTTCCTCCCGGTCGGGGAGTCCAAGAAAACGTCATCACCTCGTTCGGACTGGATTGACACGCCATTTTGGACTACTTCAATTTAACAAAACACATTGCGCATGGATAACGTCCTCTTCGCCCCTAAGACGGTCGAGAAAATTCTGATAATCGTTGATACCCATGAGCACGTAGGACAGCGTTCCGTTTGACGACAAGGACCGGCGCACGGTCGGCCTTAGACAGCACCGTAGCGGTGCGTCCATTACTGAGTTCGCCGACTGGCACAAGATCCTCAAGCACAAACTCTGTCAAGGTCACATCCACTTTCCCTCCG # Right flank : CCGATAGCCTTGGAGAATCCTGAACGTTCTATGAGAACTGAACATAATCTCCATCGATATACCGACTTCTTCCCTCTGTCAAAAGGACTTTTTTGTCGCAGCATTCCAGGTCCAGAAGCTGCATATGGTGTCTTAATAATTCTCGATGCAAATAAAGTAATTGGCCATTATCACAATATTGAGTTATATGAAGCATCACAAGCATCCTGCCCTCGGCAAGAGCGCCGGCAGTATCAACTACCAGTTGAATTTTATCATAAAGAGAACCCAGAGAACTGGTATCAACACGCGGTTTAGCCATTGCTATCATTGACTTTATATCAGCTTCATCAAGAATACTCAGAGGCAAATTCTCTCTCCATATTTCTTCTTGAATAATCGACTTTATCTCAGTTTGTAACAACAATAATCTACTCAATTCTTCAGGATTAAATCCGTCATTTAACTTCTTAACTGCAGCCTTTTGAAACAAAGCATCATAATCTAGTACTCCTGCGCAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCTAAGTCTTTGATCTGACAGGCATCTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA //