Array 1 2652-2264 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKR01000068.1 Vibrio navarrensis strain VN-0510 NODE_68, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 2651 28 100.0 32 ............................ TGAATATTTCAAGACTAAGCATGAAATGTACT 2591 28 100.0 32 ............................ ACTCTTTATCAGGCGCTTCGGGAGTGTCTGCC 2531 28 100.0 32 ............................ AAAGGTGGTCGCGGCGCTTTAGCTGGCGCTAT 2471 28 100.0 32 ............................ TTAACCCGCAGCGGCTCATTTACCGCTTGTCT 2411 28 100.0 32 ............................ AAGTCCCATTTTGACACCAGCGGTATAAGCTC 2351 28 100.0 32 ............................ AATACTTCCAGCTCTAAACTTTGTCATGAATG 2291 28 96.4 0 ........................A... | ========== ====== ====== ====== ============================ ================================ ================== 7 28 99.5 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : TAGAAAGATTTAAGCGTGTGTTTGATGTAGGTCCAGT # Right flank : TATTGGTACTTTTGGCATTTGGGATCGGCCAGTTAACAAAGCGTTTAAGAGGGATTCGCAACGCGCGGCATTTTCGTTATGCATTGATTTTATTAGTTTTTAGTGCAATGCGGTAAGTTAGTCGTTGCGTTGCTCACCCCTTAACGCGGCGTTATGCTTTATTGAGCCTCAGCAAAATCAATATATAAATTTTAATGGGAAAACTTAGTCTGATTTAGAAGTTTTCCTATTCTAATTTATTGATATTATGAGTTTATTGTTCTTTTTTGTGGCGATTGAAAGTTGAACGATGCTTATGCGTTTTTGTCCGGCTCAGCTCTGATAGATTGTGTTCGTAAAAGGTTCAATTATCGCTGAAAGGTCTCTTCCTTTGGTGTTGTTGACCCATTGATTCCGCAGGCTAATTCGCTTCAATTTATTTGGGATCTTATTTGCACCAATGATTGCTGAAAGTAGGCAAGTTTATCATTTTGAGTTAAAGTGGCTGCAAGCGATAGTCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [56.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 991-2 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKR01000121.1 Vibrio navarrensis strain VN-0510 NODE_121, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 990 28 100.0 32 ............................ TGACTTATCATCAGCGAGTTTGCATTAAGCTC 930 28 100.0 32 ............................ AACCACAACGAGAGCCCCACTGCAAAGCATTA 870 28 100.0 32 ............................ GTTTCTGTCATCCGGCACGCGGCCATCGGTTC 810 28 100.0 33 ............................ TTTTTCTGCCAATCTCTCAGCGGAAACCTTGAT 749 28 100.0 32 ............................ GTTACAGCGTTTCGCGCTGCGACCAATCAAAT 689 28 100.0 32 ............................ ATCAAGCCTACCCGCCTCATCCTGCCTAACTT 629 28 100.0 32 ............................ TAATAAGAAATAAAAACGCTAAGGTTTTTTGG 569 28 100.0 32 ............................ TGAAAAGCCTTGTGCCAATGAACGCTTGCATT 509 28 100.0 32 ............................ TCTTGCCGCTATTCGTGATTTTTATTTTTAAC 449 28 100.0 32 ............................ ACTTCGCGCATCTTTTCGTCAGTGTCGCACAT 389 28 100.0 32 ............................ TATCAGCCATGCGCCTTGGCATGGATGCAAAA 329 28 100.0 32 ............................ TCATCAGCAATCGCACGAGCTTTTTTACCGCC 269 28 100.0 32 ............................ CTAACCCGTGCTATTGAAGCCGCCAAGTTGTA 209 28 100.0 32 ............................ TGGGGGTGTGTGAAAGGACATAGCACACGCCA 149 28 100.0 32 ............................ GATTTAAGCGTGTGTTTGATGTAGGTCCAGTT 89 28 100.0 32 ............................ TGAATATTTCAAGACTAAGCATGAAATGTACT 29 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 17 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : | # Right flank : AA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [1.7-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 157-664 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKR01000148.1 Vibrio navarrensis strain VN-0510 NODE_148, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 157 28 100.0 32 ............................ AAGAAGTTAAAACGGTCCAGACCGGACAACTG 217 28 100.0 32 ............................ TTGGGTGATCAGCACTGAATGATCATCATGCC 277 28 100.0 32 ............................ TTGGTTCTTGCTCGATACAAGCCGTCCGCTTA 337 28 100.0 32 ............................ ATCGATGGCGACCCGTACAAGATGATTTCTCT 397 28 100.0 32 ............................ ATCAGGAATGCAAGAAATCATGGGCGCGTTGT 457 28 100.0 32 ............................ AGTATGACGGCACCGCTGAACGTTACGTGAAA 517 28 100.0 32 ............................ TGAATAACCGTTAGCTGGCGCGCAAGCGTATA 577 28 100.0 32 ............................ TGAATAACCGTTAGCTGGCGCGCAAGCGTATA 637 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 9 28 100.0 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GCGGCGTTAACTGGCAATAAAATTACCCATCTTTTTTCGTTGGATTTTAAGTTATTGATTTATATTAATAATAAATCGAGTGAAAAATAAAAGGTTATTTTGAGAAATTTGATGTAATTACTTTTATTAACAATAGGTTACTGATAAAGTTTCATAG # Right flank : TG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [80.0-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 50601-48732 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKR01000021.1 Vibrio navarrensis strain VN-0510 NODE_21, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 50600 32 100.0 34 ................................ CAAGCTCATACTGCGAGGCTAATTCAGCGAATCA 50534 32 100.0 33 ................................ ACGTCTCCGCTGAGCTTGTCCATGTTGCGCGAC 50469 32 100.0 33 ................................ ACCAGCGCCACCGCTGATGGTGGTACCGTGTTG 50404 32 100.0 33 ................................ TGGGAAAAAGTCAGGCAAATGGGCTCGATAACC 50339 32 100.0 33 ................................ TTTATTGTCCGCTTAACGTAGTAAAGCTGAGAG 50274 32 100.0 33 ................................ TCTTCATCGCTTAGTCCTTTCTGATTTGTGACT 50209 32 100.0 33 ................................ AAGGTCATCGGTGGTTTTGAGCGCTTTGCTAAC 50144 32 100.0 34 ................................ TGCCTAGACAGAGCAAAGCAGTTTGTTGCCCCTC 50078 32 100.0 33 ................................ CCGGAACCAATAAGAAGGCTGATTACAAATTTT 50013 32 100.0 33 ................................ TTACCCAATGGTTTTCGTGTTGGCCACGGCGAC 49948 32 100.0 34 ................................ CTTTGCGCATGAAGCGACATTGGCCGATGTGGAC 49882 32 100.0 34 ................................ TCTCGAAGCCGTGATTCTCAATCTCAAGAGTCTC 49816 32 100.0 34 ................................ TAAGCACCTTACGCTCAAGAGCCTTATTCGCCTT 49750 32 100.0 34 ................................ TCTCGAAGCCGTGATTCTCAATCTCAAGAGTCTC 49684 32 100.0 33 ................................ CAGTGCAGAAAGAAAGGATGTCATGGCCGCTGG 49619 32 100.0 35 ................................ ATTAGATCGAGCATCACTTGCCCTTGTCCCGCCAT 49552 32 100.0 33 ................................ TGCGCTCGATGTTTTCAGGCAGCGTCGCTTCAT 49487 32 100.0 34 ................................ TTCACACCACCGAACTGTCCGCTACTTTGCGTCC 49421 32 100.0 34 ................................ CTACTGAGCACTTCAATTTCCGGTTGATACTTTG 49355 32 100.0 33 ................................ ACATCCTGATACGGTCCCGCGATGTTGTTCTTA 49290 32 100.0 35 ................................ TAGTCCGCCTTAAGCGGTTTGTTAAGCCTCATAAA 49223 32 100.0 34 ................................ AACGGACGGAGACGAATAAGCCATGCTCACTGAC 49157 32 100.0 33 ................................ TCGATGGCTCGATAGAGCCGCCTTTTTGGTTAT 49092 32 100.0 33 ................................ TCGACATGTGGGATATGCCAACCAGAAAGGAAG 49027 32 100.0 34 ................................ GATACTGATCATCCCGTCGGCGAAGAAGGCCAAA 48961 32 100.0 33 ................................ GAGGTAAATGCTTAAAAACACCCCAAGATAAAG 48896 32 100.0 34 ................................ CATTCAACACGCCAGAAGATGCGTTGCTACGGTA 48830 32 100.0 35 ................................ TCTGTAATTCGAGCTCATAACCTCACCTACATCGA 48763 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 29 32 100.0 34 GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Left flank : ATTTGTGATCAAAAAATAAGGAGAGTGCGCCATGATGGTATTGGTCACCTACGATGTATCTTTTGCTAGTGAAGATGGACAAAAACGTCTCAGGCAATTAGCAAAGGTGTGTTTAAATTATGGTGTAAGGGTGCAATATTCTGTATTTGAATGCGAGATAGATGCGGCGCAATGGCTGCGCTTTAAAAATAAGATGTTGTCAATTTACGACCCTGAAGTCGACAGTTTGCGTTTTTATAAGCTCGGCAAAAACTGGCAAAACAAAGTGGAGCACCACGGCGCGAAAGAAGCGATAGATATATTCAGAGATACCCTAATTTTATAATCGCTAGGTTTGAGTTCTCAGTAAAACACCGGGGAGCTAGCGATTGCATAAGTTCTTTAAAAATAGAGCAAATATTTATTTTTATAGCTTTACACCAAATAGTTTTCTTCTACCGCGTAAAGTTAGCGGCAAACCATAATATATGCTAGTTTATACGTGCCTTTCACAATAGGCG # Right flank : TTTTAGTTCCATTAGTTAACTCTCTTTACGTACGTCGCGCCTCCCGCTTGATTCCGGACGACCAAGAAGGCCACAGCGACAGCGACGGTGACGGCATTCCTGATTATCTGGATGCCATCTCTGACTGCAACGTGATTCAGCAAACGGTAGCAGAGAACGACAGCTTCCTCATTGAAGGTCAACCTGGCGTTTGTTTACGTAAAGGTGTCACCATAGTGGAAAACCAGACAGGTGGAGCGCGCTTGCTGGATAATGAGCTGACGGTCGACAACGAGGCGGACAACATTGGTGGTATTTTTGACTTTGTGGCGACCAACTTGCCACAACCCGGTCAGAGCTATCAACTGGTTATGCCGCAGCGTTTGCCTGTTCCGGCGAATGCCGTTTATCGTAAGTTCCGAGCCGATGTGGGTTGGGTCGATTTTGTTGAAGATGCTGACAACTCGATTGCGTCTACGTCGGGTGAAGCGGGCTACTGTCCGCCTCCGGGAGACAGTGTA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCTCCCGCAGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.5 Confidence: HIGH] # Array family : NA // Array 1 8750-6140 **** Predicted by CRISPRDetect 2.4 *** >NZ_MPKR01000022.1 Vibrio navarrensis strain VN-0510 NODE_22, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 8749 28 100.0 32 ............................ TTTTGGCTTGAATGGGCCCTTGTAAATCTCGG 8689 28 100.0 32 ............................ ATGCCAAGCACAAAAACAGGTTTAGCCATTTG 8629 28 100.0 33 ............................ CTAGCGGGGGCGTTTTTCTTCGGGAAGTTACGA 8568 28 100.0 32 ............................ AGAAAAGGCGATATCGAAAATAGGCTGGGCTA 8508 28 100.0 32 ............................ TATCCTGATGAAAATGGCGCTTTCAGCTAAGT 8448 28 100.0 32 ............................ CTGCGGGCATTATATGGGCACGTTTAGCACTA 8388 28 100.0 32 ............................ ACCGACTGAGCTCGGGCGCGACAATCTGAGGG 8328 28 100.0 32 ............................ ATGAGTGTCTAGGGTGGATGCGACCAAATCAT 8268 28 100.0 32 ............................ CTGCTCATCGAAACTTTCACAAGCATCATAGC 8208 28 100.0 32 ............................ AATCGTGAAGCGACCAAGGCGGACGACGAGAA 8148 28 100.0 32 ............................ AACAGAAAGCAACACAAGAACGCCACTATGAA 8088 28 100.0 32 ............................ CTACGGCTCCGCCTACCCGCTGGACAACTCAC 8028 28 100.0 32 ............................ ACATTGGCACATACCGTTAGTGACAGCCGTTT 7968 28 100.0 32 ............................ AGAGTTACCAATCCATTAAAGGGGGGAATTTT 7908 28 100.0 32 ............................ AATAGCACTCCCACTCTTAAGAGTAAAATACC 7848 28 100.0 32 ............................ TGCTCAAAGGCACGTTCTTGCTCTGCCACCGA 7788 28 100.0 32 ............................ AATCTGGTACTTGCTCACAACAGGATTACTTA 7728 28 100.0 32 ............................ AAGCCAGCCTAACCGCTGGCTGTTTATCGCTT 7668 28 100.0 32 ............................ TTGGTCGGCTTGGTGACGATCCAACTGTAAGA 7608 28 100.0 32 ............................ ATTATACCGGCGGGTAAGCAAGTTACCCAGGA 7548 28 100.0 32 ............................ TCTCTGAATCCAGCCAATATCGTCACTTGCTC 7488 28 100.0 33 ............................ AATATGGATGATAGCGAGTTTGAGCAAGTCTAT 7427 28 100.0 32 ............................ TGTTAGCCACTCCAGACCGCTTTCAAAATACG 7367 28 100.0 32 ............................ CAGATAATGAGGCTATGATATTTGCGTGTTTA 7307 28 100.0 32 ............................ TAGCAGGTCCTCATTGCGATTCGGCCACCAAA 7247 28 100.0 32 ............................ AGTAAAATTGACCGCCTAGCACGCCAGTGCAA 7187 28 100.0 32 ............................ GACAATTCCGCCGTGAACAAAACCTCCGGCGT 7127 28 100.0 32 ............................ GTCAAGTTACTCAGCAATTACGACGACACAGA 7067 28 100.0 32 ............................ CCGCTGCGCTGAGCTGCGGCAGTCCGCGTTCT 7007 28 100.0 32 ............................ CAACGAAAAATTTACATCGGTTGCGTTTTTTG 6947 28 100.0 32 ............................ ACCATAGGCGCGGAGGTATCGCGGTTTATCAA 6887 28 100.0 32 ............................ TAGCGCAGCGGATTGATCTCTGAACTCATCAA 6827 28 100.0 32 ............................ TCGCCTGAGGGGATTTCTTTATCTCCGCAAAT 6767 28 100.0 32 ............................ CCGATCAATTTAAAGCCATGAGTTTTGCTTAC 6707 28 100.0 32 ............................ TTGATGCAATGAGTGCAGAAGAATTCACTCGC 6647 28 100.0 32 ............................ GCTACAATCTTTGCGCATGTCTTTTGCAGCTC 6587 28 100.0 32 ............................ TGCTCAGTGTCGAACACTCGCACCCATGGCCA 6527 28 100.0 32 ............................ ATGCGAGCTAGGCGTAAACCCATTTGTTAACC 6467 28 100.0 32 ............................ TTGCCGGAGTCGGCGGAAAAACCGTCGAAGAA 6407 28 100.0 32 ............................ ACGCTGAAAGCTTCCACAAAGTCCGTCAACTT 6347 28 100.0 32 ............................ GTTTAGCACTTTAGTGCAGTCGATCGGCTCTA 6287 28 100.0 32 ............................ TCGACATGCCAGCGACCGATGCCAACGCCAGT 6227 28 100.0 32 ............................ ATGCAGAGAGTGCAAAAAGGAAGTGGCTACTG 6167 28 96.4 0 .......................G.... | ========== ====== ====== ====== ============================ ================================= ================== 44 28 99.9 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : GGTGTAACTTACGTAAGTTTTGTACGCAAGCAGGTGAAATCGCCCGAGCGAATAGAACGGGATATGCAGCAAAAAGCAGCCCTATGGGCAGCAAAATCCGGCAAACCGCTGGTGGAATGTTTAGCGGATTTGCAACAAAGCAAGCCGACAGCATTGTGCTCTTTGCCGTTTATTTACTTGCATAGCCAGCAAACCAAGCAGCGCTCACCAGACAAAAACAGCAAGTTCCCGCTGTTTATTGAGATGCAGCAGCAAAGCACATCACAAGATGGGAGCTTCGATTGCTATGGTTTGAGTAGCAAAGCGAATGGGCAGTCAATGTTGGCTACCGTACCGCATTTTTAAAATGAACGAAAAAGGGTAGTTTTTACCCTTTATTTTTGCTCTTTAAAAATGTGCTTTAAATACAAATGGTTGCAACAGGCGGTTTTTAACAAGGTAAAAAGATGATTTTTATCCTAACATTCTGTTGCAGCTTATTTTTATCGCTTTATTCTATT # Right flank : ACAAAAACGCCACGAGCAAAGCTGGTGGCGTTAGCATCAATTCTAATCTAATCATAGCAATCGAGCATTTTAGATGCGCCCGTACCCCAAGCCGTACCCAGAGCGATTTTTGCTACAATTAAAAACCGTTTTAACCTTTATTTAATGCGCTCTAACATCACACCCGCTTCCATGTGATGGGTGTAAGGGAACTGGTCAAACAGAGCGAAACGGGTAATGGTGTGGGTTTCGCTCAGGATTTCGAGGTTCTCGAGCAGGGTATCTGGGTTGCAGGAGATGTACAAAATGCGCTCATAGCCTTGCACCATTTTACAGGTGTCTACATCCATACCTGCGCGTGGAGGGTCGACAAAAATCGTATTGCAGTTGTAGCTCTTCAAATCTACGCCCGCATCTTTAAGGCGGCGAAACTCGCGTTTGCCTTCCATCGCTTCGGTAAACTCTTCCGCTGACATACGGATGATCTGTACGTTCTCAATTTTGTTGGCGGCAATGTTGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //