Array 1 418396-422874 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFFJV010000009.1 Rufibacter sp. SYSU D00308 Scaffold5_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================ ================== 418396 29 75.9 36 ...........TAC...........TTTA AAACACTATTTCTGGCGCGCAGAACCACAAAAAAAC 418461 29 100.0 37 ............................. TTTCTGTTGTTACGGGGTTCTTTTTTCAAAGACCATC 418527 29 100.0 38 ............................. GCCATGACAAAGGAGTGGTACCAAAGCTATAAAGAAAC 418594 29 100.0 36 ............................. CGTGTACAGCTGCACAAAGTTTCCTCACATAAGAAA 418659 29 100.0 37 ............................. ACTCCCGATCCTGGGAAACCTCCATGATGTACAAAAA 418725 29 100.0 38 ............................. CTCGGCCGACGAGCGGGAGCACCGGGTGGACATCCTGA 418792 29 100.0 37 ............................. CAAACGCCTCACCTTGATTATTAACCGGAAGCCCATA 418858 29 100.0 37 ............................. TCCTGACCACGCGCAGGGTGTCAGGGGTCTGCCCGGA 418924 29 100.0 37 ............................. GGTATTATCCGACCTTTGTAACGCTCACACTTCCAGA 418990 29 100.0 38 ............................. TTTTATCAATTTCTACAACGTCAGAGAGTTTCCCCACC 419057 29 100.0 39 ............................. CTGGAGCGAGGCCGGTTCCGCGATATGGGCGTAGGCTCC 419125 29 100.0 37 ............................. GCAGGAAGCGAAGCGCCTGCCGTGGCAACGGAGCTGC 419191 29 100.0 38 ............................. CTCAGGAAGCGGCTCTAAAATCTGCGCACATTGCCTCG 419258 29 100.0 38 ............................. TGTCCCAGACTTTGTTTCTCAGGTGTTCGGCATCTTCG 419325 29 100.0 39 ............................. CCAGTGGTTTAGAGGAAGGCGTAAGCTTCTCCATGGATG 419393 29 100.0 36 ............................. GCCCAAACAAAAGACAGCAACTAGTAGGGTTATCTG 419458 29 100.0 37 ............................. GTGCTTGAGGTTCCACCCCCCACCATTCTCCCCCCTG 419524 29 100.0 37 ............................. AAATCAACGGAGTTCCAAAGAGAGGCATTTTCCGTTG 419590 29 100.0 40 ............................. ATGATCGTTCGGGTCAGTGACCGCGAAAATGCGTTTACTG 419659 29 100.0 37 ............................. TTTTCCAGCTCTGGCAACGGTGGAACCTCCAAACTTG 419725 29 100.0 40 ............................. CAACGGGGGGCTTGATCAGTACACCGGTGGGGAGCGCTTG 419794 29 100.0 38 ............................. TGAACACTCAGCGCGCTTGCGTAAATCTCTTTTCCTGG 419861 29 100.0 40 ............................. GCGTGGCCCTAGCCTTTGTGGGTGGCGTGACCCTGATCAG 419930 29 100.0 40 ............................. AAGTGAAAGGCTAGCGCTTGCTGTAGGTGACCTTGCCGCG 419999 29 100.0 39 ............................. GATTTCTGCCGCCGCCACTCTCGCTTGTTCGCTGTTTTG 420067 29 100.0 37 ............................. GCCTGTATTTCCGGGGCTTCCACCCGCTCCTAACCGC 420133 29 100.0 38 ............................. ATTTTGCTCAAACTTGGCAAGCTTTCCTTGCTGACTTC 420200 29 100.0 39 ............................. ACTCCAACGCCAACGCCAAGATGACCTACGACCAGACCC 420268 29 100.0 35 ............................. GCGTCACAAACCTCACAAACGGACCTGCCTTTTAC 420332 29 100.0 36 ............................. TTGGCAAACCTGGCGCAAAGTTCCTGTATCATCTTC 420397 29 100.0 36 ............................. CGCCAGCCGCGGCAAACTGCGTAAGCCGCTAAACCC 420462 29 100.0 41 ............................. CAGACAAAACCAGAATGCTGCATCTTGAGCGTTCTGGCTGC 420532 29 100.0 40 ............................. GCGTACCATATCCCTACGCCCTTATCTGGCACATCATTCC 420601 29 100.0 40 ............................. TGTTGGCCAGGTACTGAGACTGCCAGGGGTCATACCCTAC 420670 29 100.0 39 ............................. GCCGGGGACCATCTGCGACGAACTGGTGACCCAAAGCAC 420738 29 100.0 41 ............................. GCCTAATGACTACCGTTTCCAGCCTAAATACAATAAATCCC 420808 29 100.0 39 ............................. CCGTATTTCGCCGCCAGTCGTGCGGCGAAGTCTTGCGTC 420876 29 100.0 40 ............................. CACCTTTGCCTTGCCGTAGATCTCGGCAATCTCCTGCATC 420945 29 100.0 38 ............................. TTCTCTCCTGGGTGTTTCGTGTATTGAGGTGCCCACCC 421012 29 100.0 39 ............................. CTTTTCAAAGAATATCGCATTGATGGGCGGTATATCGTC 421080 29 100.0 42 ............................. TCGGCTGTTTGGTGCCACCTAAGAATTCTGGGCGGTTTAAAC 421151 29 100.0 41 ............................. CGGCCAACGTGGTGAAGTACGTGACCGACAAGCCCACCACC 421221 29 100.0 39 ............................. CTTTTTCTTGCCCTTTGCGTTAGCAGTAGGTTTTTTCTC 421289 29 100.0 41 ............................. CAGGAAAGGCGGGGCCAGGGTTTTAAATACGTTCTATTGTC 421359 29 100.0 37 ............................. ACGACGAGACGAGCTCGTTCGAGGCTGCTTTACGAAC 421425 29 100.0 39 ............................. TTGATTTTTTCGCTCATTTATGAGCATACCTCTACCCAC 421493 29 100.0 36 ............................. CAATGAGGTTCGGCACATGCTCACCACTGCCATAGC 421558 29 100.0 39 ............................. TAAAATTTCTTTCTTCTCAATCCGTACTTCCCAATCTTC 421626 29 100.0 39 ............................. ACTCTTGCCGTTCGTTGCCTCCGCCTCCATTCGGGAAAC 421694 29 100.0 39 ............................. ATCAATTCTGCTAAAACCAGATACAAACGCTCTGAAAGC 421762 29 100.0 39 ............................. TCAATCCAGCGCGCAACTGGCCAGAATAGCTTTCCCGCC 421830 29 100.0 39 ............................. TGGGCTTTTGGTGTGGTCAATGTCTGCCAGCAGAGAACC 421898 29 100.0 39 ............................. CGCAACTCCTGTAAATGAATTAGGCGGCCTTTTCAGACC 421966 29 100.0 37 ............................. CAATTCTGCTAAAACCAGATACAAACGCTCTGAAAGC 422032 29 100.0 39 ............................. TTCCCCCACCATACTCCAGCCGCTGGGCTTACTTGGAAC 422100 29 100.0 37 ............................. ATATAAGCAGGTCCAACCTCCGTAAAAGCCGCTAAGC 422166 29 100.0 44 ............................. TCTTGCGCTCCATGAGAGTAAGCTTCTACCCCAAGAGCGGGAAC 422239 29 100.0 39 ............................. TCTTGAGGGCCATCAACTGCTGCTCCAGGCGCATAATGC 422307 29 100.0 38 ............................. GTATTATCCTCCTGCTCTTCCACCTTTCGCTTCCCGTC 422374 29 100.0 39 ............................. ACCCGTCCTGGTGGAACTGTATATGGAATCGGTCTACAC 422442 29 100.0 38 ............................. TCAAGCCTCCTTTGGCTAGGGAGTTTGTTATTCCTCTC 422509 29 100.0 39 ............................. TACTGGCGTGTAGGGATCTTTGGCGTTGGTGGTATAGGC 422577 29 100.0 38 ............................. TAATGACCACGAACCACGTTTACGACTTCGCCTCCATC 422644 29 100.0 39 ............................. GGTGGTTTGGGCCCGTCCGGCTGTTTCGGTTCCTCCACC 422712 29 100.0 39 ............................. TTGCACATGGGCAAAGTATTAATAACACAAAATAGAAAC 422780 29 100.0 37 ............................. CGTGATTCTGCGCTTCCTGAAAGCTGGATTCTTAAAC 422846 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ============================================ ================== 67 29 99.6 38 TTTCTATACCACTGAGGTGCAATTGAAAT # Left flank : CTGAGCGGCACCGGCCAGATGCAGATGAACGGGACAACCTTCCCGGTAAAACCCGGCGACGCCATCCTTACCCGGCCCGGAAGTTCGCACGGACTCTCCCCAGACAAAGACACGGAGCTAACCCTGCTCATTGTTTACGAGAAGAAGTAAAACTCCAGAGCCTTTGTCCTTTGTATTTGTTGTGCCCACTTTAGTATGCTGGTTCTTCTGGCAGGTTGAAGCACGCCGGTAAAGAACTCCCCTGGCCTTTTTGGCCTAATCGGATCAACTACCCGTTTGCTCCTGCAAGGCTTTCTTTTGGTAAGAACCAAACAGGCAGGAAGCAAGGACATAGCAATAAAAGCTTCTGACCTATTTAGAATGCACAGCGTACAGCAAACGGTTGACAGCCACCATTTCCTCCGGGGTAGGGTGGTCTGGAACTGTTGGGAACTACCCATCAAAGCACCTCTCGCGGCAGGGTCTTTCCCTTTTTCAGCCGCTGAGAGCTTGATTCAACT # Right flank : TGCGCTCTAAAAATAGCGGAAAAAAGCCTTTTCCAGCACGTAGGGACAGGCTTTTCTAGATAAAATGGCGCTAAAGAAGCGTCAGGTGGTGGTAAGGAAAAATCAGCGGGCAGCCGACGACTGAGCTAATGGTCTGTTTCTGAGACGTTTTTATAAAAACAAGCCGGAAACGGACAAGCACTTGCCTCCACCCGCAGGTAGTAGGCCTCTCACCCGACGACTACAGGAACCGCTGCGGGCTACCTTTGTCGGTGCCGAGGACGTGGCGCTCGTGGTAGCGTTCCTCGCGCATGCGGTAGATGACCACGCCGTCGCCCTCCTCCATCAATTGGTTGGCCTCATGGCGGAGGCGCTGGTACTGGGCCTCGGTGAGTTCGCCCTCAAACACCGAGTTCTGGATCCAAGTGAGGTACTTCCGGAAGAGCTTCAGCATTTTTCCCACGCGCTTCTGGCCCACGTCATACACGGCAATAAAATACGGCATGTCAATTATAGTTTTC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:0, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTTCTATACCACTGAGGTGCAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-2.40,-2.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [46.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.41 Confidence: HIGH] # Array family : NA //