Array 1 190281-191957 **** Predicted by CRISPRDetect 2.4 *** >NZ_EQ973328.1 Corynebacterium matruchotii ATCC 33806 Scfld0, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 190281 29 100.0 32 ............................. CGCAATCATGTGCTCCCCACCAGGTAATAAAT 190342 29 100.0 32 ............................. ATGCCAATGTTGGCGGTGCCGCTGCGGATTGG 190403 29 100.0 33 ............................. TCGATGCGGAAGCCGATAATAAGAATAACTTTA 190465 29 100.0 32 ............................. TTTATGAAGCGTGGCGAGAAAGCACGTGTCTC 190526 29 100.0 32 ............................. GGCCCAGCGTCTTAGGGTTTTCTTACCCGCGG 190587 29 100.0 32 ............................. GTGCCCATCGTTTTGGTTGCCCAGCTGAACCG 190648 29 96.6 32 ............................T ATTCTCATGGTGTTCTAAGGCTTGAATCACCC 190709 29 100.0 32 ............................. GCAGCTTCCCAGCCTTCAGCGGTGGTTTGAAT 190770 29 100.0 32 ............................. ACCCCCTACATCTCCAAATCATGCAGGGGGTG 190831 29 100.0 32 ............................. ACGTCGGCAGCAGCCTTGAAAGAAGCGTTACC 190892 29 100.0 32 ............................. ATCAATGTGTAGCTCTGCACACATCTGCCCCA 190953 29 96.6 32 ............................A AGGCAGGCCCGGCGCGTGACTCACATAGTGTG 191014 29 100.0 32 ............................. CAGCATCGGTCACACCCTCCAAACGCATCTTG 191075 29 100.0 32 ............................. ACGATTGAATCGCCGGGTGAATCTACAGTGAG 191136 29 100.0 32 ............................. GCCTGGTGGCTAGGTGGCCTGACGGCACACCA 191197 29 100.0 32 ............................. CACCCACCCCCGTCAGTAAGGCAAGCCTAAGA 191258 29 100.0 32 ............................. AGGCACCCTGATGTTCCGGTAGAATGCGCCCC 191319 29 96.6 32 ............................A TACCATTCCTCGCCAACAATGTCAAGGAGCGT 191380 29 100.0 32 ............................. AACCCTGCAGTTTTCAGCGCCTCGGCAACCGC 191441 29 100.0 32 ............................. CGCATCCCCACCACATTTTGGCCACACCAGGT 191502 29 100.0 32 ............................. GTCGAGGCCGCTTTCCGCTTCGGCGTTCCCCC 191563 29 100.0 32 ............................. TGCTTAGCCGCAATATTACGCAAAGCCTGGTT 191624 29 100.0 32 ............................. GAGTCCGAACGAATCATGGAAGGCCTAGTACT 191685 29 100.0 32 ............................. AAGCACGGCCGCCAGACCACCGTGTATCACAC 191746 29 100.0 32 ............................. GGGTAGGTGACAACCCTGAAATCGGTGATGTG 191807 29 100.0 32 ............................. TTGAAGCTTCAACCCCCGCACCTACCTAGCCC 191868 29 100.0 32 ............................. AGCGCCAAAAATGATGTGGCGGGAACCATTTT 191929 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 28 29 99.6 32 GTATTCTCCGCGCACGCGGAGGTAGTTCC # Left flank : GCTGGGGTTCTTTGCGTGCTTTACGACGCCGGGGCGGGGGCAGATTCGTGCAGGTAGTAGCATTCTCCGCGCATGCAGGGTGGGCTGATCGGCTGGGAGGCGTTGGCCTGGGCTGCTAGGGCGGTAAGCCCATGGCTAATGTATTGGTTGTTGAAGCTAATTTTCGGTTGCCGGGAAATGTGGTTCGGCTTCTTGAGGCATTAACATGCATGACCACTTTTTGGAAGTAAGAAAGACAGGCTAGATGACGTGTTCTTTCTGATTTTCCACCTGTTGGTGTAGATGAGTTTTCCCAGCGGTTGAATAAGCTTCCTTCCAAGAGGAATCACTTAACGAGTGGCGTGGAAGCGTCTGTCTTCCCATCAGTTGAATAGGCTTTATCATGAGGGATTGGAAGTTGTGGAATCTTCACCCCATAATTCGGCCATAAAATCCAGATTCCAGAGCCAAATTTGGCCCGTTTTTGAGAATCATGCTACAAAAGACCCAGCTCATTTAGG # Right flank : CACCCCCAAACTACGAACTAAACAGTATAAACCCCAGACACTGTAAGCTGGGGTTTATACTCTATGGCAATATTCCAAAGGCGAATCAGCTTCGGTATTGGGCGGATAAAATCCCCTGGGAAGCCATCTCCCGGTTGAAATTACGGCGAGCATTCACCAGATCACCCAACCAGCCGAACATAAACAAACCGAAGGTGCAGGTGTACAGCAGCCCTCTGCCAATATTGCCGGTGTAGTAGTGGTGTGCGCCAATATACCCACCAAAAGCCAGGCACATCATATACACCCCAAAACTCTTAACGTGCTGCACCGGTTCGGCACCAGCCATGCCCTGAACCTGAGCAGCCGTCAGATTCACATTCACAACCTGCTGAACATGCTGCGGCATACCAGCATTCATAGCCGGCTGCGGTTGCTGCGGCATTGGACCAGGACCACCCGGTTGTTGTTGCGGAGGGCCGAAAATTGAGTCGTGTTGTTGGAAATTAGGGTCACCAGAG # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCGCGCACGCGGAGGTAGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0.37,0.37 Confidence: NA] # Array family : NA // Array 2 300119-299541 **** Predicted by CRISPRDetect 2.4 *** >NZ_EQ973328.1 Corynebacterium matruchotii ATCC 33806 Scfld0, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 300118 29 96.6 32 ............C................ TATGTTCATCAGTGGCAGCCTTCACCCGATCC 300057 29 100.0 32 ............................. AAAGATGGCGTCGATTCGTAAATACAAGACGG 299996 29 100.0 32 ............................. GATCCGTTCTTGTACTCGCCAGTGCCCAGATC 299935 29 100.0 32 ............................. GCAACAGGCGGGTACATCAATAGTGCTAGTGT 299874 29 100.0 32 ............................. AGTTGCGCGCGGTCATGGAGAAAGCGCGCAAA 299813 29 96.6 32 .................A........... AAGATAACCTGTTCGACGGCTTGGCTGAGGAC 299752 29 96.6 32 .................A........... ATAGACGAGTTCCGTGCAAATGTTCAGAAATA 299691 29 93.1 32 .............G.......C....... CCGTTCACCCCTCGCGGGTAGTTGTCTGGCGG 299630 29 100.0 32 ............................. GCCCCATGGGATGTGATCGTCCAATCCTATAT 299569 29 86.2 0 ...........A...A.........CC.. | ========== ====== ====== ====== ============================= ================================ ================== 10 29 96.9 32 GTATTCTCCGCGTACGCGGAGGTAGTTCC # Left flank : GACGGCAGCCCATTCCAGCTGGTGTGATGAGTGCCGACATTAGGGTGGGAAAGGTGGTGGTGTGTTGATCTGGATGCGTTGGGAGTAGGGAGGAGCAGGGATGCCGTGGAGTGAGCGGCGACGCCGCATAGAAGCGAGTGGTGCCGCGCAGGGATGCTTTTTGGAACCTAAAACCCGAAGAAGCGTGGGCGGGTTTTGAAGGACCTGGGGCAGGGCTCAAGCCAGCCCGCCTGATGCTGATACCGGATTTTGACGATACTAGCCATCGACGGATCAAACACCATCAAGCGCCCTGCCCCGTCTCAGGAAGTATTACGTATGGGAGGGAGTTAGCGGAAAAGCGTGGGAGGAGGGAGTGTGGGCAGGAATAAGGATCATGGGGCGTGGAGGATTGTCAGTAGCAGAATTTTTGCCCCATAATTCGGCCATAAATTCTAGATTCCAGAGCGAAAATTGGCCCATTTTTGAGAATCATGCTATAAAAGGCCCAGCTCATTTAG # Right flank : CATGGTGGTGAGGAGGAGTTTGCCCAATGAGCCTTTATGTGATGTCAGATGCCCCAATTAAAGACGTTGTTAATCTTTTACTACAGGAGCCGTATACGGAGAATACTATTGCTCGTAATCAAGATCCTGAAGCATATGATATCCGTACCTTAGATGGTGTTCTTATTTCACTTGATTACGGAGCTAATAGTGATGGGGATTTGGATACACTGCTTTTTGTTCCCGAGGAGCAAGAAGACTTGCAGCGGAAGATTTTCGAGTCGGTGAAAAAGCTGCGGTATAAAGCCACGATTTGTGAGCCCCCGAATGATGTTGAAGTAGTTTATATGCCAGATAATCCATTGCCTGCCGTACCTGCTTAGGACGAGCGCTAAACCATTTTTTAACCCACATGCTTCATAAATATGATAATTACCCAGGTTTTCCAGAGCCGGGCCAGGCCACATGTTGAGCAAGGGCCGGATCGGTCGGCCGTCGATAAGCTAACAACTTGGCACACA # Questionable array : NO Score: 6.03 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCTCCGCGTACGCGGAGGTAGTTCC # Alternate repeat : GTATTCTCCGCGTACGCAGAGGTAGTTCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-10.20,-10.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA //