Array 1 305060-304100 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP013939.1 Streptococcus thermophilus strain S9 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 305059 36 100.0 30 .................................... CTTTCTAAGTTGAATTAAATTCAAGTTTTG 304993 36 100.0 30 .................................... TCGCTACTATGGTTAACGATGAGGAACTCT 304927 36 100.0 30 .................................... AGCAACTTTAAAACTAAAAGAGCTACTTGA 304861 36 100.0 30 .................................... CAGTATTAATGAGGTTTGGGTGGTCATTCC 304795 36 100.0 31 .................................... CCATACTCTCTATCAGTTCATTTAATTCTTC 304728 36 100.0 30 .................................... TGAGAGTGTCTGATGGATTTATTGGTAACC 304662 36 100.0 29 .................................... ACCTCATACATGGGGAAAACTTGTAAGTA 304597 36 100.0 30 .................................... TATTTCACGAATTTCTACACTTTTCAACCT 304531 36 100.0 30 .................................... CTGAAACCTTGTTTTGAAGCGCTTGGAAGT 304465 36 100.0 30 .................................... GTCAATTGATACTGCAATCTCTTTAACATT 304399 36 100.0 31 .................................... ACTTCAATATGGTCAACATCTTGATCACCGA 304332 36 100.0 30 .................................... TAATATGTCGCTCTACTGATTCCAAAACGG 304266 36 100.0 30 .................................... ATGAATTACATTCATGATTTTATCGAGTTT 304200 36 100.0 29 .................................... CGTGCCATTGTTTCGGTCGGACGTGGGCA 304135 36 94.4 0 ..................................GT | ========== ====== ====== ====== ==================================== =============================== ================== 15 36 99.6 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : TTGATGGCTTTATCTCAGAAGAATCTTATACTATTTTTTATAGGCAAATCTGTCATCTGGTCAAGAAGTATCCAAATCTAACCTTTATTTTGTTTCCTAGTGACCAAGGCTATTTAAAAATTGATGAAGAAAATAGTAGGTTCGTCAATATTTTATCTGACCAGGTGGAACATTTGTATGATGTTGAGTTTATGTATGAAAGGGTAATGAAATATTATCCAAGTAATGATTTTCCGACGAGAGAAGGTTTTAGGATGTCTTTAGAAACTGTGACACCTTATTTATTGACAAAAATGCTGAGACAACCTAGTCTCTCACTTGTTGATTCAGTAATATTGAATATCCTAAATCAGCTGTTTCATTTTAGTTACCGTATAAGATGTTCTCAGACACCTGATAAGGAACTATTACAGAAATTTTTAGAAAGTAAGGATTGACAAGGACAGTTATTGATTTTATAATCACTATGTGGGTATGAAAATCTCAAAAATCATTTGAGG # Right flank : TTGATTCAACATAAAAAGCCAGTTCAATTGAACTTGGCTTTTTAAAATACACGATAAACATAAGGATTGTCAGGCTGACTAACCTCTTTAATCTCAGTCAAATTAAGGATAGGGAGGCTCTGTTTAAGGTTTTGATAATAATTCACAGTGATGGTACCAGTGACTGTTACCCAGGTATTATCCTTAAAGGTTTGGTCGCTTCCTGTCGTTGCCAGTCCGTAAACACCTGAATCGGCGATACAGTGGATAATACCGAAACGGAAGATGAACTGATATCCCTTGGTCTGTGGATCATTGTAAACAAAGCCGGTATAGGTGACCTTCTTGCCCACGAAATCGTTTGGATAGAGATAGATGAGCTCCATGACTTCCATGTAATTTTCCGTGGTAATCTGGATGGTCTCACATCCCTTGTACTTGGCTAGCTCCTTGGTCATTTCCTTCTCATAAGCTGATGAGGTGAAGTAGGAGCTGGTGTCCGGCCTTAAGTACTGGGTAGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //