Array 1 11666-12097 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXZR01000020.1 Ligilactobacillus salivarius strain KLA003 NODE_14_length_41813_cov_3.96675_ID_6619, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 11666 36 100.0 30 .................................... TTACGGTAGAATGTATCTTCAATTTTTCTA 11732 36 100.0 30 .................................... GCTACTACTCATTGTGAACTTAAACTGGTT 11798 36 100.0 30 .................................... AGTACTAGCGGCTCATCTGCATATATACTA 11864 36 83.3 30 .............TTG..T..........GT..... CATTGAAGTTCGTATGGTGGATATCATCTA 11930 36 86.1 30 ............A.T.....A........GT..... ATAGGTTTAATGATTGCTCCAATGGTTGAA 11996 36 83.3 30 .......G....A.T......G.......GT..... TCACGTTTATGTGAGTGATTATAATTCACA 12062 36 86.1 0 .......G....A.T..............GC..... | ========== ====== ====== ====== ==================================== ============================== ================== 7 36 91.3 30 GTTCTGAACCTAGGCTAAATGACATAGGTTGAAGAC # Left flank : AACTAGCAAAAAACAGTTAAGGCTCCTTAATGTTTGTTTTGCTGTTGAAAAAGAAAGTCACATCTAGGGTTACCTAAGCTTGTGGCTTTTTTTATTTTTTAACTTTTTTGAATTTTATTTTAAAAAAGTATACAAAAACATTTGACTTAGAGTGTGAGATAGTGTATCATAATAAACGTAAGGCAAAGGGTTAAGCCTACAGGGACATCAGTAAACTACATGTAAGCCTCTATCGTTCCTGTAAGCATTAGCACAAGCCTTATAATCTTAACTTTATCTTTATTCATTTATGTACATTTTATGTGTAGCGATGCCAAACGGTAGATCAATGCAGGTGCAATTCCTGCCATCGCTATTGGAGGACGCTTGTTCTCGACAGCTTGGTTAATATCTTTGACCTCTGTATAATCGCAAATTGCATTAGTTTGTTTACGATTATGCAAGTCTGAAGAGTTCCCAAGAAGCTTATGCCACAATTAAATACAGGTTAGAAAATAACG # Right flank : CTGAAATCATGGGCTTAATTAAAGTCAAAACAACGATGTAGCTCAATGGTAGAGCAAAGCGAGGCGACGTAGGTTCGATTCCTACCATCGTTATTGGAGGGTGCTTGCTCTTCACAGTTTGGTTAACATCTTCGCAAACAAAGTTGCTGATTGCATTTCTTTGTTGAAGAGTTCCCAAAAAGCGCTGATAGCACAAATAAAGACGTCCATTGTGGAAGACTAATGTAGTGTAGTCAGCTGAAAGACTATACATAAATTACGTTGGTGTTTAAAAAGGAGTTGGAAAAAATGGAAGAAAAAGTTTTAGAAAGTCGTAGAATTAGAATTTATCCTACTAAGGATCAACAAGCATATTTAACGTTTAATATGTTTGCTAATATCAAGATGTGGAACGCATTACTAGCTGAAGTTTATAAGCCAGTTAGTGAGTTAGATGAAGTTCAAGCTTTACCTAGAAACAAACAAAGTAAAGAAGTTTATAAACGCATTGAAAGAATGTC # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:0.56, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTGAACCTAGGCTAAATGACATAGGTTGAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-22] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 14029-14263 **** Predicted by CRISPRDetect 2.4 *** >NZ_LXZR01000020.1 Ligilactobacillus salivarius strain KLA003 NODE_14_length_41813_cov_3.96675_ID_6619, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 14029 36 100.0 30 .................................... ATACTCGTGGTGTCTAATTATAAGACGTTC 14095 36 94.4 30 .........................G....C..... CGTGCCTTCGATTCCTTCGCTTGGGAGATC 14161 36 100.0 29 .................................... GTCTCAGGAGGAAAAAATCAAAAATATGA 14226 35 91.7 0 ............-...............C.C..... | G,AC [14243,14248] ========== ====== ====== ====== ==================================== ============================== ================== 4 36 96.5 30 GTTCTGAACCTAGGTTAAATGACATAGGTGTAAGAC # Left flank : TTGTGTTTATTGATCGTTGGTCACCAACTTCAAAGCGTTGCCATACTTGTGGTTACATTAAGCACAACCTTAAATTAAGCGACCGTAAGTGGACTTGCCCTATCTGTAATTCTCACCATGATCAAGACATAAACGCAGCTAAAAACATCTTAGATGAAGGCTTAGACTTGCTAGACAAAATGAATGATTCTTGCAAGAAATGTGGGCATGAGCGTACGGTTATTACAACAGACGAAAAGTGGACATGTACAAAGTGTGGAGCTAAAAATAAAACCACACCTAAAGAAGAAAATAGTAGCGATGTAGCCTAACGGTAAGGCAAGGTAACAGATGCAGGTTCGACTCCTACCATCGTTATAGGAGGACGCTTGTTCTCGACAGCTTGGTAAATATCTTTAACCTCTACAGTATCAGTTAGTTAATCTAGCAGAAAGATATTGCAAGTAAGAAGAGTTCCCAAGAAACTTATGTCGAAATTAAATATAGGTTAGAAAACAACG # Right flank : CATATAGAGGAGCCGATCAAAAAAATATTCAACGTTCAAATAACGCTTCAAGCATAACCGATTGCATAAGGGCTTTAATCAAGTCTTATCGGACATCTGCCTGTAATTCGTAGTAGGTATAGTCTGAGTGATAGCTTAGACAAGCCGAGAGATGATTGGTAACAATTATCAAACCTAGTAAAAGCTAGGACGTTTGGTAGGTGTGTGGAAATGTGTGACGTTAGTGCTTTGCTAACCGTTGGCACTGGATAAAATAGACGCTCACGGTGTGAGAATAACCCATTGGCAGCTTAGTGTGGTAGCTAAGTGATGTGATGGGAATAACCAAAGACAGTGTTTGCCTTGACGTTTAGGAAACTAAGCTATAACAACGGAAACAAGAACGAGTAGGGTAATGGCATCGAGATTACAGTAATTTCGCTACTGGACTTGAAATCCACATGCGACGATTAAGACAAATAAAATAATTCTGAATGATTGCCTGAAAGTTGGTACTTATC # Questionable array : NO Score: 2.68 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTGAACCTAGGTTAAATGACATAGGTGTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-6.50,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA //