Array 1 2128773-2126690 **** Predicted by CRISPRDetect 2.4 *** >NZ_CDRJ01000001.1 Ralstonia solanacearum strain CFBP7014, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 2128772 36 100.0 30 .................................... GGGCGGCGGCTTCACCCGACATCGGGCTTC 2128706 36 100.0 30 .................................... TGTTCACGCTGGTGACAGGTGTCGGTGGTC 2128640 36 100.0 30 .................................... ACCCGTCGCGTCGGCGCGGCTGTTTTCCTT 2128574 36 100.0 30 .................................... CGAGCCGTACATGCAGGGCTCAAACAACCT 2128508 36 100.0 30 .................................... GGAAAATAGGTATTTGAATGAATCCTTGGA 2128442 36 100.0 30 .................................... GCGACGGGCAAGTGCTCCGCTTTCTTAGCG 2128376 36 100.0 30 .................................... TTGCTGCTGCACCATTAACAGCAATGGAAA 2128310 36 100.0 30 .................................... ATACCGGTGTGTTTTATGTTTCTGGGCGTT 2128244 36 100.0 30 .................................... GCAGCCGATGCACTCGCGGAAGCTGCCGTT 2128178 36 100.0 30 .................................... ACTTGGCGAAGCTCGGAGCGATCTTGACCA 2128112 36 100.0 30 .................................... GAAGATGCTGAGACACTACTTACCGCAAAT 2128046 36 100.0 30 .................................... GATCAGTTGAATACGCCGCAATATCGTGTT 2127980 36 100.0 30 .................................... GCTGATCGCGTTCGTGAAGCGAGCGCTTCA 2127914 36 100.0 30 .................................... TCAATCGCGATGTTGTTAGCCTGGCCGATG 2127848 36 100.0 30 .................................... AAAACAGATCGTTGCGTGCATCGTATCTCG 2127782 36 100.0 30 .................................... AATCGGTGACGTGATGACGAAGCCCGCCGC 2127716 36 100.0 30 .................................... GCGAACTAACGTCTGCACCAGTTGCGGCAG 2127650 36 100.0 31 .................................... TCCTTCAACCCTGCTACGCAGCAACCCCCCA 2127583 36 100.0 30 .................................... CATCGGCGTGGGTGTGCGCCAATTCTGCTG 2127517 36 100.0 31 .................................... TGCGCTCGGTGCGGGCCTTCTCAATGGCCAG 2127450 36 100.0 30 .................................... ACGGGGGCGCACCGCAAAACGTCAAACTTC 2127384 36 100.0 30 .................................... GGTGCGCTTGGTGGCAATACCGTCAACAAC 2127318 36 100.0 30 .................................... TGCTGGGCCTTAGCCAACGTCGCCGGGTCG 2127252 36 100.0 30 .................................... AAATGGACGCTTGGCCATAATCATAGTTTT 2127186 36 100.0 30 .................................... AACGCAACGCGCCATGCATCGTGCGCGAAA 2127120 36 100.0 30 .................................... AATGGGGACGTCCCCAATGGGGAGTGTTCT 2127054 36 100.0 30 .................................... GGGACGTTCATGTACTACATGAGCGGCTCG 2126988 36 100.0 30 .................................... TTCGGGCAACACCGTTGCTGGTACGCCGAA 2126922 36 100.0 30 .................................... GCGTTGCACGCGCGCACGCGCGCCAGGGGT 2126856 36 100.0 30 .................................... ATCATCTGCGACAAGGTGCGCCCGCCCAAA 2126790 36 100.0 30 .................................... GAGCACCAGCTGTGGCACGCCGGCCAGTCG 2126724 35 83.3 0 ...........................T.-..ATGA | ========== ====== ====== ====== ==================================== =============================== ================== 32 36 99.5 30 AGGTTAGCAGATCGGGAATTGCGCTCTGGCTACAAC # Left flank : TCGTTGGCGCAACTGTATCTGGGGGAACGCAAGGAGCTGGAGTTGCCGTTGTGTCCTACACCGATTGATTTAGCCGCAATGTTCGTCCCATTGGCATGAGCATCGCGCTTTCGGGATATCGCCTCATGTGGTTGCTGACCATGTTCGACCTGCCCGTCGGCACCAAGGCTGAGCGCAAGGCGGCGACCAGTTTTCGCCATTTTCTGCAAGACCAGGGCTTCGAGATGGCCCAGTTCTCTGTTTACATGCGGTTCTGTACAGGAAGGGAACAGGTGGATACGCTGTGCAAGCGTATCCACGAAGCACTGCCAGGCGGTGGCAAGGTCGATATCTTATGCATCACCGATAAGCAGTATGAAAACATCGTCAGCTTTGCTGGCAAGGTCAAGCAGGCACGGAAAAATCCAGACCAGTACACACTGTTTTGACACCATGCGCGTAGTTTTTCTCGTTTGCCTGCGTGAAATCCTCCTTTTGATTCAAGGGGTTGCGTGTGTGCC # Right flank : CCCAGCGAAACCTGCACAGGTTAAGCTGCTAAAGCAAATGCCTCAGCCGGGGTCTTCATCTTCAGCGCCTGGTGGGGCCGTCGATGGTTGTAGAACTGAATCCAGTCGGCGATTGCCCGGCTGGCATGCTGCGGGGTTTCGAAGCGATGCCGGTGCACGCATTGCTCCTTGAGCGTGCGGATCACACGCTCGACCATGCCGTTCTGCTGTGGACAGTGCGGCGTGATGAACTCCTGACGCAGGCCATAACCTCGTACCAAGGCCGTGTAATCGCGGCTGGTAAAGACCAAGCCGTTGTCGCTGCGAAGCAGGAAGGGCGTCGGAACCTTCCCCAGCGTACCGAACCGGGCGATCAGCGCATGCTCCAACGCGCTCGACGCCGTGCTGGCCTTCCCGCTGCGCGACAGATGCCAGCCCAGCAGCTCCCGCGTGTAGCAGTCGATCACCAGCGCCAGCGTCGCCCAACCGTCTCGTCCTGCCCAGACGCGGCACATGTCGGT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AGGTTAGCAGATCGGGAATTGCGCTCTGGCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.20,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA //