Array 1 26336-24452 **** Predicted by CRISPRDetect 2.4 *** >NZ_OALD01000026.1 Neisseria meningitidis strain Neisseria meningitidis isolate 23346, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 26335 36 94.4 30 ........G...A....................... GCGGAACGGGTTGACAGACTGAATTTGAGT 26269 36 97.2 30 ............A....................... ATCACTTTTAAAGGCGGCATCGGCTGGTTT 26203 36 100.0 30 .................................... AGGGGTCGTGAATGGAGTTCTTGCAGTTCG 26137 36 100.0 30 .................................... TAAGCGTTTCTTTTTTGGTCTGCTTCTGCT 26071 36 100.0 30 .................................... AATCAGACCGACTTTACAACGAAGGTTTGA 26005 36 100.0 30 .................................... TGCTACCAGCGACAACAGGCATTACGCCCA 25939 36 100.0 30 .................................... TGAGAAAGATTTAAGAACTAAGTTCCCATC 25873 36 100.0 30 .................................... TCAGCCTCAAATACATCCGCCAAATCGTTG 25807 36 100.0 30 .................................... ACACAATCTCCGCCGTTCCAATCAAATGTG 25741 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 25675 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 25609 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 25543 36 100.0 30 .................................... CTGATGAAGATACAACCGCACTAACTTTAC 25477 36 100.0 30 .................................... AATGATGTATATAAAATGCCGTAAAAAATG 25411 36 100.0 30 .................................... CGTCTGAAGGTTTGCCCATCTCCTGACAGG 25345 36 100.0 30 .................................... TCGATTGTCTATGAAAGCACTTGATGATTT 25279 36 100.0 30 .................................... CTCTTCATTGAAGAAGTTATAAGCCTTTGT 25213 36 100.0 30 .................................... TTTGGTAAAGGTTTCTGTTGCGACCCGAAT 25147 36 100.0 30 .................................... GCCTGCGTACTTGGTACGCTGGTCGCCTCC 25081 36 100.0 30 .................................... TTCATAGATCGATGCATGAGGTTTTCATGG 25015 36 100.0 30 .................................... AGGTCAAAGTGTCAGGCAAATTTAAAGGTG 24949 36 100.0 30 .................................... AAATCCATTTATCGCCCACCCTTTCCGGCC 24883 36 100.0 30 .................................... TGCTGAAATTATGGCAAGTATGGGGCAAAG 24817 36 100.0 30 .................................... TAGCAAACAAGGAATATTCAAAGTCCTTTA 24751 36 100.0 30 .................................... CGGCAATGCGGCGGCTGTGTTGGTTGGCGA 24685 36 100.0 30 .................................... AGAGCGCGCTGAGGCGTTCGTGGGTTTGGA 24619 36 100.0 30 .................................... TTGGTGGTCGCGCGTGTTAGACGGCAGCTA 24553 36 100.0 30 .................................... ACGTATTCGTAAATTAACACCTAGGGAATG 24487 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 29 36 99.7 30 GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGGGCGGTTTGTTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACTTCGACGGGAAATCCTTATTTCATAAGGGTTTCCCGTTTTATTTGTTATGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACACAGTCTGTTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGTTGCAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATTGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACGCCGGCTTGAAATGACGAAATCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCTTTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : NA //