Array 1 1526-537 **** Predicted by CRISPRDetect 2.4 *** >NZ_ORZG01000024.1 Xanthomonas fragariae strain NCPPB 3743 isolate NCPPB 3743, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1525 28 100.0 32 ............................ TTCGCGGGCTAACGTCGGCATAGCAGCAATGA 1465 28 100.0 32 ............................ AAGGCGTCACGCCCGGAACGCTGATGCCGTTG 1405 28 100.0 32 ............................ ACGATGCTGCCGCTGGTGCCGAACACGTAGGC 1345 28 100.0 32 ............................ AGGAAGATCGCCAGGAGGACCAGGACGGTGAC 1285 28 100.0 32 ............................ GTCCTCATCTACACCACGCATCCCTACATCGT 1225 28 100.0 32 ............................ ATGAGCGGCACCGCTCAGATAGGCAATAACAC 1165 28 100.0 32 ............................ ATCACGGTCAGTACGGCACCGCCGATCGCTGC 1105 28 100.0 32 ............................ ACAAAGCGCGATGCACCGCGCTGGGAATCTCC 1045 28 100.0 32 ............................ AATCACGGTGTGGTAGGTGTCGATGTGGGAAA 985 28 100.0 33 ............................ ATGGTCATTGCGATCAACCTGTTTACGTTCTTC 924 28 100.0 32 ............................ GAAGACGGCAGTGTCATGCAGTTGCAGCAGAT 864 28 100.0 32 ............................ CTTGTATTGGGCTGTGTCTACTTGAATTGAAG 804 28 100.0 32 ............................ AGTACCAGGGCAACGTCCAGTGCGCATGCAAT 744 28 100.0 32 ............................ GCTAGCGCACTGACCATCACCAGGGAGACAGG 684 28 100.0 32 ............................ ACCACAATGTTAGAGGTATCGATCCACTGCAC 624 28 100.0 32 ............................ ATTGCGTCATGATCACAGCATCGCCGCCATTC 564 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 17 28 100.0 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGTAGACCCTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGGTCGCCAGTTGAACCGTGGCGGCGGTTGGGGTTGTAGAACATCTCGATGTAGTCGAATACCTCGGCGCGAGCGGCGTCCTTGGTGGAATAGGTCCGCCGCCTGATCCGCTCGCGTTTGAGCAGTCCGAAGAAGCTCTCCACGGGTGCGTTGTCGTGGCAGTTGCCACGCCGACTCATGCTGCACACCACGCCATGGGACACCAGGAAACTGCGCCAGTCATCGCTGGTGTAGACAGACCCTTGGTCCGAATGAACCAAGCAACCAGCGTTGGGTTTGCGCCGCCACACCGCAGACAACAAGGCCTGCACGACCAACTCGGTGTCGGCCCGATCGCGCATCGCCCAGCCGACGACCTGCCGGGAAAACAGATCGATCACAACAGTCAGGTAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //