Array 1 13054-12293 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH815216.1 Winkia neuii BV029A5 strain BVS029A5 supercont1.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 13053 29 100.0 32 ............................. GGCCGAGACTGTCAACGATGGGGTAGCGTTTC 12992 29 100.0 32 ............................. AGTGAACCTATTTGGGTTGCCTGTTCTTGCCT 12931 29 100.0 32 ............................. ACGCGGCCTCATCAATGACTTCGTATTCGAGT 12870 29 100.0 32 ............................. AGCCTAAAAGGGCGGCAATAATCTGCGCGATA 12809 29 100.0 32 ............................. TTTAGTGTTATACGCGTATCCCATAATAAAAT 12748 29 100.0 32 ............................. TTCAACCCCTTCTTTTTTATAATATTATTTTT 12687 29 100.0 32 ............................. TGGGTGCCTGTGGTCGGTATTGGGGCAGCATG 12626 29 100.0 32 ............................. CATGTGATGTATAGGCTTGAGATTTGAAAGTA 12565 29 100.0 32 ............................. CAATCTCATAGTCGCCGGGGGTAATCTCCAGT 12504 29 100.0 32 ............................. AATACTGTTCCGACATCATTCCCCTTTTGTGA 12443 29 96.6 32 A............................ CGGTTTGGGTTGGTATTGGCCAGGTTTGCATT 12382 29 100.0 32 ............................. GTGCCGCGCCCGATTCCTATTTACGAATCGCA 12321 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 13 29 99.7 32 GGAATTACCCCCGCTCGCGCGGGGAAAAG # Left flank : GGGGAAAAGGGCCTCGCCTTGCGGCCGGGAATGTCGACCCCGGAATTACCCCCGCTCGCGCGGGGAAAAGCATAGCGTGCTTCTGCGTATCGGCGGAAGGGGGGAATTACCCCCGCTCGCGCGGGGAAAAGCACGGGGGCGGGGATTGTGCCACCCTCACATTGGAATTACCCCCGCTCGCGCGGGGAAAAGGGCCGAGACTGTCAACGATGGGGTAGCGTTTCGGAATTACCCCCGCTCGCGCGGGGAAAAGGGCCGAGACTGTCAACGATGGGGTAGCGTTTCGGAATTACCCCCGCTCGCGCGGGGAAAAGAGTGAACCTATTTGGGTTGCCTGTTCTTGCCTGGAATTACCCCCGCTCGCGCGGGGAAAAGACGCGGCCTCATCAATGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTC # Right flank : TCTAAATGACCTGCGCTTTTGGGCGTCTGTATCATTCTTCCATGCTGGTAGCTATCTTACAGTCTGCCGCCTGCAAGGTGCGTATCTATGCCTAGTAACGCACCATCTGAGTTCTCCAACTCAGCCCCTGACGCTAGCCTCGGTCAGTTCTTTTTGCGGCTTAGTTTTGCAACTGCGCCCAGGCTAATCATTGCCATGGCTCCTAGCAGAGTGGGTACTAAAGCTGTCGCTCCAGTTGTCGCTATGAACGAGCCGACTGTTTTTGGCTCACTCGCTTGCCGTTCCGCATCAGACTTGCCGCCGTTTTTGCCCCCAGCGTTTTTGCCTTCGCCGCTGGGCTGAGCACCTGGTTGCGAACTAGGCTTTGCACCGGGTTGGCTTCCAGGCTTTGCCCCAGGCTGCGTTCCAGGCTCGGTGCCGGGTTGCGCGCCGGGATCGCTAGTGTTGTCGCCCTCGTCAGTACCGGTGGAACCGTCCTTGCTGCCGGAGGCGCCCTCACC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAATTACCCCCGCTCGCGCGGGGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-5.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA // Array 2 14734-13179 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH815216.1 Winkia neuii BV029A5 strain BVS029A5 supercont1.4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 14733 29 100.0 32 ............................. GAAGGGGCGCGGCGTGATTGGCGCGAAGAAGC 14672 29 100.0 32 ............................. ATTACTTGCACGGTAGAGAAGTTTGGGCGGAA 14611 29 100.0 32 ............................. TTGCCTCTGCTGAATGAGAGGATGAGGGTTTG 14550 29 100.0 32 ............................. TCCTTGATTACCAGGAGGGGTTGAGGGGCTGG 14489 29 96.6 32 ......C...................... CTGCCCATAAATGCCCCCCTCCCGCTTGCTGG 14428 29 100.0 32 ............................. TATTGAAACTCGATATTTGGTATTTCATAACC 14367 29 100.0 32 ............................. AAACGCTAATGAGGCAGGGCAGCAAATTAATA 14306 29 100.0 32 ............................. CTCGGTTGCGTCGTTGCTGTTGGTGTTGTTGT 14245 29 100.0 32 ............................. TGGGCCAAAGGCGGGGTGCCGTTGTTGTAGTT 14184 29 100.0 32 ............................. CAAATCCTAGCTGCGGGTAGCGTGGCATGGAG 14123 29 100.0 32 ............................. ACTGGTATGAGCAAAACGGCATAGAAATAAAC 14062 29 96.6 33 A............................ AAAAGCCCGAAAGCCGAATGTGCGTGAATGTGC 14000 29 100.0 32 ............................. TATGTATGCTCGCGCCGGTGACATGAGCATGT 13939 29 100.0 32 ............................. TTCCTGCCTGTACAGGGCCTGGAATTAGCAAC 13878 29 96.6 32 A............................ CTCGAGCAGCTGCTCAACCGTTGCGAGGCAGC 13817 29 100.0 32 ............................. CATAAACTTTTTAAGCATCCAAGGCATTTACC 13756 29 96.6 32 A............................ TCCACAACTATTTTTTCGCCCGCCTGCACCCG 13695 29 100.0 32 ............................. CTCAACGCAGTACCCTCGTCCAAGTCGGCGAT 13634 29 96.6 32 A............................ AAGGCATTCATCACTCCATCTATGCCACGGAA 13573 29 100.0 32 ............................. GGCCTCGCCTTGCGGCCGGGAATGTCGACCCC 13512 29 100.0 32 ............................. CATAGCGTGCTTCTGCGTATCGGCGGAAGGGG 13451 29 100.0 32 ............................. CACGGGGGCGGGGATTGTGCCACCCTCACATT 13390 29 100.0 32 ............................. GGCCGAGACTGTCAACGATGGGGTAGCGTTTC 13329 29 100.0 32 ............................. GGCCGAGACTGTCAACGATGGGGTAGCGTTTC 13268 29 100.0 32 ............................. AGTGAACCTATTTGGGTTGCCTGTTCTTGCCT 13207 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 26 29 99.3 32 GGAATTACCCCCGCTCGCGCGGGGAAAAG # Left flank : ATAGGGCCCACAAAAGATTTCGCGAAATTGCCACTATTCGTAACGAACAGCAACTTTAAAGAACGGTTCGCCACTATAAAGGACTATGTTCCCGGACAGGAATTAGCACCTAGACGCCAGCAATTCACCACTGTTGGCACACGAGAACAATGGTACGCAAGTGTGAAGGAAAAACTGCAGCTCTAACGCCTAAAAGACTCGGGAATGATTGCTGACGCGTCCCCTACGTTAATCAATCACGGGGCATGCTACTTACGGCAGGGAGCGTCCTTAAATAGCCTGAAACCAATAGGGTTAGGTGTAGATAAGAATGGCCGCTACTGCAACTAAATGCAACAGCTACAGAAACGGCTATGACATATTAAACGATTATTCCTACACGTATCTGAGCTGCACGTGACACGCCACTCGACAGTGGTCGAGTAACATTTATCGAATTTCTCCCTGTTCCATTCTCACGGGGAATAGAAGGACCTGCTGGCGAGACTGCTCTGAGCTCA # Right flank : ACGCGGCCTCATCAATGACTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTTTCGGAATTACCCCCGCTCGCGCGGGGAAAAGGGCCGAGACTGTCAACGATGGGGTAGCGTTTCGGAATTACCCCCGCTCGCGCGGGGAAAAGAGTGAACCTATTTGGGTTGCCTGTTCTTGCCTGGAATTACCCCCGCTCGCGCGGGGAAAAGACGCGGCCTCATCAATGACTTCGTATTCGAGTGGAATTACCCCCGCTCGCGCGGGGAAAAGAGCCTAAAAGGGCGGCAATAATCTGCGCGATAGGAATTACCCCCGCTCGCGCGGGGAAAAGTTTAGTGTTATACGCGTATCCCATAATAAAATGGAATTACCCCCGCTCGCGCGGGGAAAAGTTCAACCCCTTCTTTTTTATAATATTATTTTTGGAATTACC # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGAATTACCCCCGCTCGCGCGGGGAAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.80,-12.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: R [15.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.64 Confidence: LOW] # Array family : NA //