Array 1 25468-24838 **** Predicted by CRISPRDetect 2.4 *** >NZ_VOMK01000027.1 Enterobacter roggenkampii strain KCJ3K345 NODE_27_length_60413_cov_10.084796, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 25467 28 100.0 32 ............................ TTCCCGTCAGCTCCACGAAACGGAGCCCATAA 25407 28 100.0 32 ............................ TGGCCGCCGCGAACATCCTCCCGGATGAAACT 25347 28 100.0 32 ............................ CGAGTGGGCACGAAAACAGGATATGTACGTAT 25287 28 100.0 33 ............................ CATGCTTATAAAGCCTCTTGTCGTCAAAATCCA 25226 28 100.0 32 ............................ TCCAAAAACGGTATCCGCTATCCGTTCATTAA 25166 28 100.0 32 ............................ ACGCAGCGCGAGCCAATTCCTCCTGTTTCCTT 25106 28 100.0 32 ............................ AAGCGCCTGGCGGGCGCAGAATTCATCACTGC 25046 28 100.0 33 ............................ ATTCTGTATCAGCCGGATAAGTATCACCTGGAA 24985 28 100.0 32 ............................ GCTGGAATCAAAGTGATGGAGTGAGTATAAGG 24925 28 82.1 31 A...A......C...C......C..... ATAGAAAATAAGGCCTAACAGTTCTCGCACC C [24900] 24865 28 71.4 0 ....A...T..A....A....CCT...G | ========== ====== ====== ====== ============================ ================================= ================== 11 28 95.8 32 GTGCTCTGCCGTACAGGCAGCTTAGAAA # Left flank : AACGGGCCACGCGTTCGCTCTCGTCGGGCGTTAACGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTGATACCCGTGACACGCAAAATGTCCGCTTTCGACATGGACGTCCACTCGTGGATGTTGTCGAGCACACTGACGGGTAATCCCTGATTGAGAAATTCAATCAACCGCATACCTCGGTTGGCGGGTAAACCGGCGTAACGCCAAAGTGCGTTATCAGCAGGTTTCTGTGCGGGGATCCATGTTCTCATGTCACCTCCTGAGTAATGTCATTTGTCATGGGTAAGTATAGCCATTTGTCAGGGTGGGTGGAATCGGTGTTTTTGTGAGGGGGATTGATGCGAAGAAAGGTGTTTTGACCCTAATTTTTAGCGTTTGTGTAATTTATTGATTTTAAATGAGTATTCTTGGTGGGTAAAAAAGAGGGTCAGAGAAGATTTTTTAGCTTTTTTTGTATGCAAATCAGAAGGGTGTGGAGATATTATTTCA # Right flank : CTGGAACGAACGGCTAAATAATTGTTCAAATAATCAACTGCGACACAAAAAAATAAGGCCGGGATTAACCCGACCTTTTAAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGTTTGAAACGCAGCAAAACAGTTTCGGCGCATTGCCCAAGCGTCACGGTACAACCGAACGGAAAGCGCATTCGTAAAGGGGATACAACAG # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 36071-35020 **** Predicted by CRISPRDetect 2.4 *** >NZ_VOMK01000027.1 Enterobacter roggenkampii strain KCJ3K345 NODE_27_length_60413_cov_10.084796, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 36070 28 100.0 32 ............................ TCCGATATATACTGGATATGCATACAGTAGTT 36010 28 100.0 33 ............................ AGCTCATGCAGTTGCAGCAGGTGCCAGCCAACA 35949 28 100.0 32 ............................ TTCCGGCGCGTCAAATCATGAAACAGGCATTT 35889 28 100.0 33 ............................ TCTACCGTTGCCGCTACCACTGGAACATAGAAT 35828 28 100.0 32 ............................ TTCCTGCATTATCACTGCGCTGTCAGTCGAGC 35768 28 100.0 32 ............................ GGACGGGTTAATAACGCTTCCGGATGGCAAGG 35708 28 100.0 33 ............................ AGCTACCGGCGACTACACCCAAACCCGCGTTTA 35647 28 100.0 32 ............................ ATCGGGGACACCAACAACAAAGAACAGGTCGA 35587 28 100.0 32 ............................ AGCTGGGTTCCGGATCGGCAACAGCAACAGAC 35527 28 100.0 32 ............................ CAAAAGATACCACCGGCTCCGCTGATTCCGCG 35467 28 100.0 32 ............................ TGACGCTTGAAGAAAACCGCTCAATTAACGGC 35407 28 100.0 32 ............................ GGAACTGTCGGTTAATTCGGTTGAATGTGAAC 35347 28 100.0 32 ............................ TGACCAGCAAGCATTTCAGGGGTAACTGGCGG 35287 28 100.0 32 ............................ CCTTATACATGCTGTGTGGACCCTCCATGACC 35227 28 100.0 32 ............................ TGAATCGCCAGCTGAGCGTACTGGAAACCACC 35167 28 100.0 32 ............................ AAATGCAGGGCCATCAGCGCGGAAGCGGATAC 35107 28 100.0 32 ............................ ACCACGGCAACACTCTGCACGGAGCCGTCACG 35047 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 18 28 100.0 32 GTTCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : CTCCCGCAAACGCAGCCCGTTTGCCGCTGTCTCGGAGCCTGGCTGGAAGAGGTGAAATCCGGCCTCACAGAATCAATGCGTGATTTTCAAGTGTTGGAATTTGAGGACGAAGCGGAACAACCGCGACAAAAAGAGTGGCTGCTGGAAGACACCGAAACGAAATGTGATTACTGCCGGGCGTTGAATCATGTGCTGCTGGTGTCGCATTTTGATCCCAATATGCTGCCGCACCTTACAGGGCTACTCCATGATATTGCGCATTCGATGGCTGCAGATGTCGTTGCGCCTCAACGTGCAGAAACGGTAGTTCACATTATTTCCTGAATGTAATTTGTGGCGTCGGTGACAGACCACCGTCGCCACTGGCTTGACCCTTTTTTTTGATGATTACGTAACTTATTGATTTATAGGATTCTAATTTACGAGTTAGAAAAAAGGGTTTTATGAGCGAAATTTGATTATTTTCTTTTCTAACAATAAGATGGCGTGGTTTCTTTTCA # Right flank : AAGGCCGCCAGGCTTTGATGCCATGGAAATGGCGTCGCTGCCACACGGAAAGCACAAGTAACAATCTCTCACAAATATTCACTGCGTCGATTTAAAAACGCAATACCATCATACCCACGCTCTCCATTTTCTGATTAAATAAAAATTCCATTCAGGAGTTAATTATATTGCTATTGATATATTATTTGTAAGAATGATACATCAAAGAAAAAAATAATTTTTTGTTTAATTATCACCGAAATTTCCATTCATTTGATATCTATCACATTTGCATTTGTCTTATCTCCGATAACATACGCGCATTCAACACTTTGAAATAAAAGCCGTTGCCATGCCTGCAAATAGCATCACCCCTACAGACTTAAAAACCATCCTGCATTCAAAGCGCGCCAATATTTATTACCTGGAAAAATGTCGCATCCAGGTGAATGGCGGGCGCGTTGAATATGTCACCCAGGAAGGCAAGGAGTCGTTTTACTGGAATATTCCCATCGCGAATA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 52168-50937 **** Predicted by CRISPRDetect 2.4 *** >NZ_VOMK01000027.1 Enterobacter roggenkampii strain KCJ3K345 NODE_27_length_60413_cov_10.084796, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 52167 28 100.0 32 ............................ CCAGTCATTGGCTGCAGTTTTCAGCAGTGACC 52107 28 100.0 32 ............................ AGTGACAAGGATTTCTTTGAACGCCTTGAGAA 52047 28 100.0 33 ............................ TGTAGAGATAAAGGCGGCCAACCCGGCCAGCAA 51986 28 100.0 33 ............................ TACAAAGGCCGTCGATGCCGTCTGTGTGTTGCT 51925 28 100.0 32 ............................ GTCACACGGTGTCAGTGATGCGTCGACAACGA 51865 28 100.0 32 ............................ AGAGACGAGGCTGAACGGCTTATCTCCTGCAT 51805 28 100.0 32 ............................ AGCTCATCCGAAAAGACATGGGCTTGGCAATC 51745 28 100.0 32 ............................ CGGAGGGGAAGCCATTACCCGGCAAAACCCTT 51685 28 100.0 32 ............................ ACGCCCTGAGTGGCAGCACTATGCCAGTAAAC 51625 28 100.0 32 ............................ AATAGGCCGGAACATTAATTTCGTTGGATGGA 51565 28 100.0 32 ............................ AGGGTCGATCCACTCGCCGCCGATCGCCTTGT 51505 28 100.0 32 ............................ TGATTCGTGCAGCCTAGTCTATTCCGTATAGG 51445 28 100.0 32 ............................ TGGCGGCGGCTGAATTTTTGCCGCTGGCAAGC 51385 28 100.0 33 ............................ AGGCCCCGGAGCTGTACGGGCTAAACGTCGCGT 51324 28 100.0 32 ............................ CCAATTCCCGCCAGGCGCAGGAGGCCGCGGCA 51264 28 100.0 32 ............................ AGCATCTGTCTTTTATGCGGTCGCTGCTGAAG 51204 28 100.0 32 ............................ TCCGAGCTGTAGCTGCTATTCCAAAGTGTTAC 51144 28 100.0 32 ............................ AATATGAACAATGCGATGCTCTGCAAGCAGAG 51084 28 100.0 32 ............................ TCTGTAACGCTTTCGGGCTTACGGCATAGCAC 51024 28 100.0 32 ............................ TGTGCAATCCTTTCAGGATTTCGATCACTTCA 50964 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 21 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACGGTTTGCATAAGCTGTTTGGTGGGGTGGGCTTTATCAGCGGTATGCTGGTGGAGAAAGGGCTGCCGGGGTTTATCGCCTACGGCGTGTTGATTGGCGAAGTGGTGGCGCCGATCCTGATTATTGTCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATCGTGGCGTGGCTGATGGTGGGATTGGATGAGACATTCGCGCTCGACAAGGTCGGGGCATGGGCGATTGAAAGCCTGGTGTACTTCTTCATCGGCTCGCTGGCAGTGGCGTTTTTAGGGGCAGGGCGGTTTGCGCTGGGGAAAACACCTGCGTGGCGGTAGGGGGTGGAATCTGTTCCGAGGGAAGGGGACTACGGACCCTTTTTTATTGGTGAGTTTTAAGTTGTTGATTTCACAACGGTGAATTGTTGGTGGGGAAAAAAGGGTTTACGGAGAATTTTAGAGGGATTTCTTTATATCACAAGAAGATAGGTGTAGATTGTTCCA # Right flank : GCACTTCAGCCGGGTAAGCGTCGGTGGTTAGGGTCGAATGCCGAACAGGCAGTAGGCACAACGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAAGCCCGGTGGCGCTGACGCTTACCGGGCCTACGAACGAACGTTTATTGTTTATGCGAGGACCAGATCGCCCTGCGGATGGCACGAGCACGCCAGCACGTAACCCTCGGCAATTTCCGCGTCGGACAGCGTCATGGTGCTGGTGACGGTATACTCCCCGGAAACCACCTTTGTTTTACAGCAGCCGCACACCCCGGCACGGCAGGCCGCCGCCACCGGTACGTTGTTGCTTTCCAGCGCCTCCAGCAGCGTCGTGCCCACGCGGCCAAAGAAGGTCTGCGCAGGCTGCAGTTTGGTGAACTGAATCCCGCTGGTTGCCGCTTCCGCCACCGGCGTGAAGAACTGCTCTTTGAAGAAACGGGTCACGCCGAGCGTTTTCACTTCTTCTTCGACGATAGCCATGTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //