Array 1 46811-50519 **** Predicted by CRISPRDetect 2.4 *** >NZ_UPHK01000053.1 Mycobacterium persicum strain MK15 isolate MK15, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== ========================================= ================== 46811 38 100.0 35 ...................................... GACGAGGACGCCACCGATCAGCTGTACGCCGACCA 46884 38 100.0 37 ...................................... TTCCCCGACAAAGGCGGCACCACCCAGCCAGCCAAAA 46959 38 97.4 33 A..................................... ACGCTGCTGCGTAACGATGCGCCGTTGGTGGCC 47030 38 97.4 35 T..................................... CGAACAGTGTCCCCCGGCTGGGCCACCATTTCCGC 47103 38 97.4 35 C..................................... TACTCGTGCACGCCAAAGGCCGCGCGCACGACGAA 47176 38 97.4 35 C..................................... TCTTGGAGCTGGCCAATGCGTAACTCTGACCCGCG 47249 38 100.0 33 ...................................... TACGACGAAGCTGACGAACTGCTCTACGTCGGA 47320 38 97.4 35 A..................................... TTCGCGGTTGTGCCCGGGAAATGGCCAGGGTTTGA 47393 38 97.4 38 T..................................... CATCAGCCGGCGTAGAGCGGGCAGGATGTCGGCTGCGA 47469 38 100.0 35 ...................................... CCCCGTGTGCGTATAGAGCCAGGCGAGGGTCTCGA 47542 38 97.4 35 C..................................... CTTGCTGTACCCGTCGCGGGTGATGGACGTGTACA 47615 38 97.4 36 C..................................... GGGTTAGGGATTTGCGACCAGTGCCACCGTGAGGGC 47689 38 100.0 35 ...................................... CGATCGCGTGGGTGGACCACGGCTGGGTCGGGGAC 47762 38 100.0 37 ...................................... GCTACCCCCGCCCTACGTGTGTTGGAGACACCGTGGC 47837 38 97.4 35 C..................................... AAGAAGCGCCTCGTGGCCGGATTCTTCGCCATGCG 47910 38 100.0 36 ...................................... TCAACGTTGAGGTCCCGCTTGAACTTTGGCCCGTCA 47984 38 100.0 36 ...................................... AGCGCGAATCACGCGGTGTGTGCGGTATGTGGAGAG 48058 38 97.4 36 C..................................... CCGGGCACCGATCCGACATTGATCCCCGGAGGCGGG 48132 38 100.0 35 ...................................... CGCAATCTCACTATCACCCGAAAACTGGTGTGCTG 48205 38 100.0 35 ...................................... GACAAATAGGAGAACGATCGCAATGAGTGAAACCA 48278 38 97.4 34 C..................................... TTTGGAATTCTACCTCCACAAGGCCCTCTATATC 48350 38 100.0 34 ...................................... ACGAGTTCAAGCTCATCATCGGCACCAGCGCAGA 48422 38 97.4 34 C..................................... CAATTCGCCGGGGCCGGTATCGTTTGAGATGAAT 48494 38 100.0 35 ...................................... AAATCTCATCCGTGGCCGGCCGTGGTGCGCCAAGC 48567 38 100.0 36 ...................................... TACGACCACCCGTCCGAACGCGCCATCCAGATCGGT 48641 38 100.0 36 ...................................... ATCCGAGACGCCGCTATAGCAAGCACCTTTGCGCCG 48715 38 100.0 35 ...................................... AGATAATCGGCTAGAGAATCTTGAACTGTGGTCAA 48788 38 97.4 35 A..................................... CGAAGTACAAGCTTTCGCGTGGGACAAGCAGACCA 48861 38 97.4 36 A..................................... ATCACTGATCAGCCGCTGATTGTGTGGTCCGCGCAT 48935 38 100.0 35 ...................................... ATTTGAGAAAGGAAACTCCCATGGCCATTATTGGG 49008 38 97.4 41 T..................................... CTTGGCGCACCGACCGAAGCCACCCCCGGCCAAACCGCGGC 49087 38 100.0 36 ...................................... GGGTGAGCCGACGCCCATTTTGGTTCCGTCTTTGCA 49161 38 97.4 35 C..................................... CCGGGTGTGGGAGCGCAGGGAAAGCGAGGGAAGAT 49234 38 100.0 36 ...................................... CTAGGTGTGGTGCGTGCAAGACGTCGTGGGGTCCAG 49308 38 97.4 37 A..................................... CAGATACCCAACTATCCGGTCCACCATCTGCCGGCGC 49383 38 100.0 37 ...................................... GCTCCGGTGGACAGACGTCAGAGATGGGGCCGCGCCC 49458 38 100.0 34 ...................................... CAGCCCGGAGCTATAAGGCTTATACGATAACGTC 49530 38 100.0 35 ...................................... AGCGGTGAGACACGCGACGGCTGGAATGTAGCCGA 49603 38 100.0 35 ...................................... TTTGGCCCTGCACATCACCCGGACCATGGACCAGG 49676 38 97.4 37 A..................................... AGGTTGAGCCATGTAGCAGTCCCGCTCCACCACCGCC 49751 38 100.0 35 ...................................... CAGTCGTCGGCGCGCGGTCGAGATCCGGGCGCGTA 49824 38 100.0 33 ...................................... GGCTAACCCCCCGCGGGTGAGCCCGCCGAGTGG 49895 38 100.0 35 ...................................... CGTCGTAACTCCTCCGCCGCGGGATCCGCCGTGGA 49968 38 97.4 36 C..................................... TCATTAATCTCCAACGACACCGGGCCTGCCGAATTA 50042 38 100.0 36 ...................................... AACGGAATAACGTCACGAATCACATCGTCGATCTGC 50116 38 100.0 33 ...................................... ACCGACGCGAGTAGCCGACCCGTCGAGTTGCCT 50187 38 100.0 37 ...................................... TGCCGGTGCTTGCCGACCCACGCAAGATCCTCGTCGC 50262 38 100.0 35 ...................................... CTTTCAGGCGGCGATGCGGAGTAGGTCGATGATGG 50335 38 97.4 35 A..................................... TTTTGACCCGAGTGTCCAGCGATACCGCACACGGC 50408 38 100.0 36 ...................................... ATCCGCGAAGCCGACCTGGCCGCCACACCGACCCAC 50482 38 86.8 0 C.....A..........T......T............T | ========== ====== ====== ====== ====================================== ========================================= ================== 51 38 98.7 35 GGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAAC # Left flank : ACTTCAGGCGCTTCTTCTGGCACGGCACCTTCGCGGCGATCTGACGCATTATTTCCCATATAGAACGACAGGGCGGTGAGATGGAGATACTAGTGGCCTATGACATCAGCACGGCGTCACCTGACGGGGAGCGTCGTCTTCGCGGGATAGCGAAGGTTTGCGAGGGGTACGGTCAGCGTGTCCAAAAGTCAGTTTTCGAATGTCAGCTGGAAATGCGCGAAGTCCGCCTGCTGATAAATGACGTTGAGAAGGTTATCGACCCGAAATCCGATCGGGTAGCCGTCTATAGACTGCGTGAGCCGTACCGTCGCTACGTGGTGACCCTTGGCCGTGGGCCAGAGGTCGACTGGCGGCACCCAGTCATTTTGTGAAGGGGCGGACCCGGGTTAGACGTGCGACCCGTAGTAGATCCGCCCGAGGATTCGGGCTCCCAAAGCGCAGAACGGTTTGTTGATAAGTTGATGATTGTCGCGGTCGCCGAAAAATAGCTGTTCGCGAAG # Right flank : TCGACCCCACGGCTCACACCATCGACAAGGTTGTCAAGCGTTGGATGACTTTCTGCGGCGCCGATGATTCGAAAGATCAGGCTCGACAAATGACCCTAGTGGTGTGTCACGCAAATAGTTAACTGCATGTTCGGTATTCTGGATCGGTGAGCGCATCACCTGCAGTTGCTTTGGCCATGTCGGTTGGCGAGCGTGAAACGTTGGAGAGGTTGGCGCGGTCTGATTCGGTGCCGCATCGGCAGGTGATGCGCGCGCGTGCGTTGCTGATGGCTGCTGACGGCGTGGCGAACACCCGCATCGCTGAGGAGGTGGGGGTGACACCGGTGACGGTGCGTAGCTGGCGCAAAAGGTTCAGCGAGGACGGGCTGGCCAAGCTGGGACAGGTACGTAGAGGACGCGGCCGCAAAGCCACGATCTCAGACGCGCAGGTCGCTGAGATCGCGCGATTGACCACCGAGGAGACCCCGCCCGGCCACACGCATTGGTCATGCCGCACGATG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.94, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GGCGGCGCCGGGCTTTGCTCGGCGCCGAGGATCGGAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.10,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //