Array 1 30065-29566 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCMD010000016.1 Anaerostipes hadrus strain DFI.5.34 IOLMPLJC_16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 30064 32 100.0 35 ................................ GATCCATCAAGGAGAGATGCGATTTATCAGTCAGC 29997 32 100.0 34 ................................ TTTATATATACCTTGCTGTTATCAGTTACTTCTG 29931 32 100.0 35 ................................ ACGTGAAACATGAAAGCGACTGGGGGCAGAACAAA 29864 32 100.0 35 ................................ ATCAAACAGGAAACAGAAGATATTTTGACAGTATC 29797 32 100.0 34 ................................ AGCAAGGCTCTTACTCTTGCAGAAGGTACAAACA 29731 32 100.0 35 ................................ GTTTCCCATCTTTAGTAGTAAGTTCTTTAAATACA 29664 32 100.0 35 ................................ TACGGAAAGTATGACGAAAAGAAGAAAAGCTTAAC 29597 32 71.9 0 ...G.......T...A..A..CAT...C..T. | ========== ====== ====== ====== ================================ =================================== ================== 8 32 96.5 35 GTCACTCCCTTCGTGGGAGTGTGGATTGAAAT # Left flank : TATCCAGCATTTTTGTGGAAATGAGGTGATAAAATCAATGTTAGTATTAATTACCTATGATGTAAATACAGAAACAGCAGCAGGAAAAAAGAGACTGAGAAAAGTAGCAAAGCAATGCGAAAATTATGGAAGGCGAGTACAAAATTCTGTATTTGAATGCATTGTTGATAATGCACAATGTGTGATGCTAAAAGCACTCTTAAATGATATCATAGATGAAAATGTGGATAGCTTGCGTTTATATTATTTAGGGAATAAATATCAGACTAAAGTAGAACATTTTGGTGTAGATAGAGGAATACAAGTTGATCAACCATTGATTTTATAGTGATGCGAGTATATAGCAAACATAAAAAGAGTGGGAGATTCGCACTTAAAATATGAAGTAAAAAATAAATTTGTATCTAAAAATAAATAGTATTTGAATGATTTTTAGATATAAGATAAAATTTATTAGTGATATTGAACAAAAAATTAGAAAATTATTGGTTAATATTGCT # Right flank : ATATTTTACTTGGTGTGGGTTATATTAATATTTGCAAATTGTCATCAATATTGTAGTAACGATAGGCGGATATACATATAATGGAAGCTCAAGAAAGGAAGAAATCAATGAAACGATGTAAAATTACCGCAGTACGGAAAACAGAATATAAAGATCTAATGGAAAAGTATGAAAATCCGATCCAGCATGCCTGCGATATAGAAGAAGGACAAGTATTTATCACAGAAGGATGGAAACGACCAGAAGGATTTTGTGAAAGTGCATGGGAGAGTATTTCACCATTTGTTATGACATTAGCATATGGAGGTAGTGATATTTATGAAGGCTGGATGAAAAATAAAAATTCAGCGATGATCAGTTGCAATGATGGTTTCAGACCGGTAAGTTTTTACATTGAAGTGTTAGATGAGAAAATATATTAACGAGGAGATATGAATCATGTCGACTAAATTTGTGATGATACAAGCAATAGGATTCTTAGGAACAATCACATTTTTCTT # Questionable array : NO Score: 9.08 # Score Detail : 1:0, 2:3, 3:3, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCTTCGTGGGAGTGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : NA // Array 1 2708-3333 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCMD010000036.1 Anaerostipes hadrus strain DFI.5.34 IOLMPLJC_36, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 2708 30 100.0 35 .............................. AAATAAGAATTTATCGAACAGATCTGTTTTGACAG 2773 30 100.0 38 .............................. TGGCGGAACTGTATAATGTTTAGAAAGGGGTGTAGATA 2841 30 100.0 35 .............................. TTTTCTTCTTCGGGTTCTTCTCCCTGTTCTTTCTG 2906 30 100.0 35 .............................. TGCGGATACGGTGAAAACCACACGATCACTGCAAC 2971 30 100.0 39 .............................. CAACCATATTTTTTCCGCTTTTTCACTTTTATAATAAAT 3040 30 100.0 35 .............................. TATAAAATACTGTTATCAACGAGAACTGGTATCTG 3105 30 100.0 37 .............................. TTGATACCTCATTTAATAATGGATTTTCAATATAAAA 3172 30 100.0 37 .............................. AATTTTCCAATGCTACCTGCTCAATTACAATTGCTTC 3239 30 100.0 35 .............................. AATGTATAAAAAAAGAATAGGTATAATCCTTGTCT 3304 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 10 30 100.0 36 ATTTAAATTCCATTATGATTCTATTAATTC # Left flank : CTGTACTATTTCAACCCGTTCTTCAAAAGTAGTTTTTCTTCCTTTGGTCATGATAATGCTTCCTCCTGTTCCAGAAGATTTTAATTCTTCATGACCATTATACTTCTTTATCCAAGATTGTAACTTACCTTTTGAACGGATTCCATATTTTTTGCAGATATCATCTTGAGAACCATAGCCTGCTAAATAATCTAAGACTGCTTGCTGTTTCAATTCTTTGGAATATTTTTTATTCCCTTTCAATGTAAATGCATTTGCTCCCATAGATTCATAGTTTCGAATCCATTGTTGGACAGATGCGAGACTTACATCAAACATATGGGCAATTCGTTGTTGGCTTTCTTTTCCATCCAGATATAGATTTACAGCATATATCTTATTCTCAACAGATACTTTTCTTTTAGACATAAAATATGCTCCCTCCTAAGTGACAAGTTTTTATTATTTCACTTGTCTACCTAGAAGGGAGCATATCAACTACAGGACAGCCTGATTCCAAT # Right flank : CCGTCCCAAAATCATCCCCTTATTTAAGCCAAAAAACGTCTCTATTTTGTCGACCTCTTCAAAATTCAACATTTCTTTCTTGTCCCTAATCATATATTTCTGCAACACCTCCTATTTTAGGCGTTTCCGCCTTCTGTCGATCCCCTATATTTTTTGCACTATCAGGGGTCGACAGAAACCCCTAATTTTTCAAGTTGATTTTGTTCGACACATTCTATTATGAAACTTATTTGCTAAATATGCAAGTTAAATACACGCATTCATTATATATACTTTTCGAGCAAACACTATACAGTCATATATGCATCAAATATCACCGTCTGAATAATCCAATTTATCGTCATTTTTATAAAAGTCATGCCCACGCGAGAAAATTTCCGTGGGCATGACGTGGGCACAGCTATTTTTAGGCTTATTTTCAATCAAAACCACCGGCTTAGCCGGTGGTTTGTACTAGCCCTATAAGGGCTTATT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTAAATTCCATTATGATTCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:83.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 38376-39276 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCMD010000007.1 Anaerostipes hadrus strain DFI.5.34 IOLMPLJC_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 38376 30 100.0 37 .............................. TGAGACAAAAAATAATTCCAATCCTGATCGTATTGTT 38443 30 100.0 36 .............................. TGATCCTAAACGATTTAAGTCGGCTCTTACTTTGCT 38509 30 100.0 36 .............................. AGTACAGAAAAATCAAGGCAGATCTTCAGGATCAAA 38575 30 100.0 36 .............................. ATTAGATCACTGTTTACCTTTATCTCTACAATCCCA 38641 30 100.0 38 .............................. TATTTTATCCAAAGTCAACCTATTCATTTCAAAAATGT 38709 30 100.0 37 .............................. CTGAAATCACACCACCTACACTTGCAGGACAAACTGG 38776 30 100.0 38 .............................. GATTGTAGCGGATTGGTATGGTACTGTTATAAGAAAAA 38844 30 96.7 38 ................A............. TCTCCCGCTTTATCATAAAAACCTACATAAAGATAATT 38912 30 100.0 38 .............................. GGAAATTCCAACAGTAGTAAAAATAGCAATGTGCAATA 38980 30 100.0 37 .............................. TGACAGGAGCTGTATTAGATGGTTATGCTGTATGTGA 39047 30 100.0 36 .............................. GGGAATAGCAATGCGTAGATAAGTGTTATGATGCAA 39113 30 100.0 35 .............................. TTTATATTTACCAAGACAACTTCTGTCTTGTTCTC 39178 30 100.0 39 .............................. AAAAAATTAAAGGTTGACGGAATTGTAGGATATAATACA 39247 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ======================================= ================== 14 30 99.8 37 CTTTAAATTCCATTATGTTTCTATTAATTC # Left flank : ATATAACATTTTCCAATATGATTCTATTAATAATTGGAGTGGGGATGCTCAATTTCCTGCTTCCTGCTCATTTAAATTCCATTATGTTTCTATTAATTCCTTCTTTCCATTATCATAAGCCGATGAAGTTCTTTCTTTAAATTCCATTATAGTAGAAGATACTCTTGATACCCGAATGGTGCTCAATGCATTAAATAAAGCATTTAAGATAGCCAAACCTCAGATCTTGAACTCAGATCAGGGATGTCAGTTTACCAGCCAGCAATATATCGATTTTGTAAAAGAAAATGGTATCCGTCAGAGCATAGATGGAAAAAGTCGTTGGGCTGATAATATCATGATCGAACGATGGTTTCGAAGTTTTAAGTATGAAGAAGCTTACCTGACACAATATAATAATATCAAAGAAGCCAGCGCAGCTATCAAACGATATGTTCACACCTATAACTTTGAAAGATATCATTCTGCATTGGATTATCTTTACCATCAATCAATTTTAA # Right flank : CCCGTCCCAAAACCAACCGCTTATTTACTCCACAAAACCTCTCCATTCTGTCGACCTCTTCAAAATATATCATTTCTTTCTCACTCTTCATCATATGTTTTAACAACACCTCCTATTTTAGCCATTTTTTACTTCTGTCGATTCCCTGCGTTTTTTACACTATCACAGGTCGACAGAAATCATTATATTTTTATCATATCAAGTTTTTTATTAGCTTGACACTTCCTATTATGAATCCAATCAATCAAATATGCAACCCTAATATACAAATCCATATATAAACATAAAATTCTCTCTGAACAATATTCCTAAATTACCCAAGAACATCATCCAGAGAGAACTCAAACCCTCTATTCCCTATACACTTCCACCTACTCCTCCGTCTTAATCGAACTAATCACCACATCCCCCAACTGGCACCCCACTTTCCGAACCACAATATCCTCAATCTGACTCCTCTCAACCTTAGACAGATCCTTCTTATTCACCAACACATCCAC # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTAAATTCCATTATGTTTCTATTAATTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //