Array 1 12383-15001 **** Predicted by CRISPRDetect 2.4 *** >NZ_VWPF01000018.1 Actinomyces marmotae strain zg329 Scaffold17_1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 12383 36 100.0 35 .................................... TCGTCGAGGCCGTCACCGCGCGGAGTGAAGGACAC 12454 36 100.0 35 .................................... TGTTTTGACCAGTCTTTCTGAAGGGCAACCCTTGT 12525 36 100.0 35 .................................... TCACCTCAACCTTCTGAACCACAATGTCTGTCACC 12596 36 100.0 35 .................................... CGAGCTAGCTTGTATTCGAGGTTTGTGTCGTCACA 12667 36 100.0 36 .................................... GCGTTCACCGTGGCGTCGTCGTGGACGTGCACCGTG 12739 36 100.0 35 .................................... TCCTGGCCGTCAGACTCGTCCATAAGTACGATATG 12810 36 100.0 36 .................................... GTCGGCGTCGTCCGACAATACCTGGCAGTAGTAGCG 12882 36 100.0 38 .................................... GTGCACGGGCGAACACGACGCCGCGTAGACCCCGCCAA 12956 36 100.0 34 .................................... GCGGTCAGGGCGTTCGCCTGCTGAGCGGACACAG 13026 36 100.0 38 .................................... ATGTCTACCGGCTTGGTCGGACGCTTGCGGAAGACGAC 13100 36 100.0 34 .................................... GTGATCCTCCGAGCGACGCCCTCGCAGGTGAACC 13170 36 100.0 39 .................................... CCGGCAGGAGGGCGCGCGCATTGCTGCCGAGGTCCAGAA 13245 36 100.0 36 .................................... CCGTTGACAGGTCGCGGTAGTCCAGTGGGACCCAGT 13317 36 100.0 35 .................................... TACTGGGAACCACGCGCCTTGCGCTGCCACACGCA 13388 36 100.0 37 .................................... GAGGACGGTCCAGTGGACCTCTGGTGACGAATGGAGT 13461 36 100.0 38 .................................... CCATGCTCACGCAACCACACCAACCCACGCTGCACCGA 13535 36 100.0 38 .................................... CTGTCGTTGTCGGGGATGTAAGGGTCGATCTGCTCGCG 13609 36 100.0 35 .................................... CCAGCAGCGAGCGCACAGCCTCAAGCTGCTCGAGG 13680 36 100.0 36 .................................... TTGCGCATGTCGGCAGCGGAGACAAGACGAGCCCTG 13752 36 100.0 35 .................................... CTGGAGGATCTGGGTCGCGTCGAGCTTGGCGTAGG 13823 36 100.0 36 .................................... CCAGTACACGGGGGCGCAGAAGAAGCACCTCGCAGT 13895 36 100.0 34 .................................... GCGTACACCGTGGCGTCGTTGTGGGCGTTCACCG 13965 36 100.0 36 .................................... AGGGTCGCGGTGGCGTCGGTCGCCTCGCTGGTTCTG 14037 36 100.0 35 .................................... TGTACTGCTCACCTGTCCATGTGCCAACATTGATA 14108 36 100.0 32 .................................... GATGGGACAGGCCCCGCCTGTAGCATGCTCCA 14176 36 100.0 37 .................................... TGGTCGTGGATGAGGGTGATGGTGTCCATGAGCTCGG 14249 36 100.0 38 .................................... GCCGTGGCGTTGTCGTAGACGCTCACCGTGGCGTCATC 14323 36 100.0 34 .................................... GGGTAGTCATTTCCCAGGCCGTCGGCAACCATGC 14393 36 100.0 36 .................................... CGCCTGGTCCCTCCACAGCGGGTTGATGAAGGAGCC 14465 36 100.0 36 .................................... GCCGCCACCGTCCACCGCGCCCAGGGCGTCACCGTC 14537 36 100.0 33 .................................... CGCCAGTGCGAGCCGCTGTACTCCTCAGCCACA 14606 36 100.0 37 .................................... CCTCCGCAACAAGTCAGCAACCCACCCTAATCACGGG 14679 36 100.0 38 .................................... GAGCGCGGCGAGGCCGCGAAGCGCAAGCAGGCCAAGCA 14753 36 100.0 35 .................................... GCGGTCACCCTCGCGTTGCTGTAGGTGTACACTAC 14824 36 97.2 34 ..............C..................... GACTACCTGCGGAGCGGCACTGTCACGTTCCAGG 14894 36 100.0 36 .................................... GGGCGGTTGGGGGCACTATGTCTGCTCCCAACCGCC 14966 36 94.4 0 ..............C....................T | ========== ====== ====== ====== ==================================== ======================================= ================== 37 36 99.8 36 GTTGCAGTTCCTTCGGGAACTGCGCTTCATTGAGGC # Left flank : TACAAGGGCGTAAGGGTGCGTTGATGCGCGATGATGTGAGGCGAGTGCTCGTCGCCTATGACGTGCCCTCCGACAAACGGCGCGGCCGAGTGGCGAAGATTCTCCTCAAGTACGGCGACCGGATCCAGTACTCAGTGTTCGTGGTGGACTCCGCGCCAGCGAAGCTCATGCGGCTGCGAGAGGAGCTGAGCGCGGCCGTTGACCCGGATGAGGACTCGATCCTGCTGTGCGACGTCGGGCCGTTGGCCTCGGTCGATGCGAAGCGGTTCACATACGTGGGCCTGACGAGGACCATCACGCCTGAGGGGCCTCTCATCGCCTGACGCGAGCGCTCCGGCGGCACGGGAGACCCGGGGGAGCGCTCGCGTGCGAGGAACGTTGATATCCCAAGGGAGGAGGGCTACGCTACCCTCCAAGCGAGGGTTCGAACCGACTTGACGTCGGCAGCGCTCGCGAAGACCCGTCAGAACCCTTGAGCGCCAGCCGATTCTAGCGGGGCT # Right flank : TTATCCCATTAGGGGAGGGTGGGTGCGTCACCCGTATTGAGGTTGGGAATGGGCGGGGTGTTGGCCCGCTCGGCTGGAGTTCTTAGGGTGGTCTGGAACGTGTTGTCGACTTCCTGCTTGACGTTCAGGTCGTTTCCCTCGAATGGCGTCTTGACGTCGATTCCGATGCCCTGGTGGACCTTTTCTTCCCGGGCGCTCAGCCGCGGCGTCATAAAAGGTTCCGAGCGCATGGTTGCTGGCCGCCATCAGGTCTTGTCTGGGTTCAGGCGCCACCGGTGAAACCCACGTTGGGTAGCCGCAGGAGTCGGTCGGCTCAGGGGCGTGCCGACTGACGACGTCCAGTGCCGCATGCGGATAACCGACCCAACGGTCAGGCCGGACGCGCCCCCACTCCAGCGGGAAACCTCAATGAGTATGTGAGTGCAAACATGATCCTACTAAGAGGGCGCCGCTATTGTTGGTGTTATCTGGTAGTGAGTGCGTTACGATTCGCTTGCCCT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCAGTTCCTTCGGGAACTGCGCTTCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,11] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //