Array 1 395-688 **** Predicted by CRISPRDetect 2.4 *** >NZ_ARZA01000104.1 Caldisalinibacter kiritimatiensis strain L21-TH-D2 NODE_252, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 395 29 100.0 38 ............................. AACGAATATTCTAGTAATGATGAATATGAACTTTCTCC 462 29 100.0 37 ............................. CTGACTAGGTATCGGAGTTATTGTCAATTTCACTTGG 528 29 100.0 38 ............................. TCAGTGTCCCCTGTTCCTGTGCCATCACTTCCGTCAGT 595 29 100.0 36 ............................. TTTTACAGCATGCTTCATAGCTTGTCTCAATACTTT 660 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 5 29 100.0 38 GTTATATCTTAACTATGTGGGATGTGAAT # Left flank : TAAAAACAAAATTATTGGATGATTAATTTTGAAAAAGAAAAATTGCCAACTATTACTTGATAGTAACAATTTTACAAAATGATTGTAATTAACTTCAAAAATATGATATAATTGTAATCGGTTAAGATGACAAGGCGATTGAACGTCTTTAGGCTGAGGGTATCAGATGCCACTCGGTAAGGGTTAATCCTAGTTGTTGTGTTACCGACTAGGCATTCCACTTTAATTTTTATATTTTGCAGTAATGTAGAAAAATAAAAGAAACAACTTAAAAAAAGTAAATAACAGAGTTCAAAGCGTTTATGTTAAAAATTAACAAAACATTATTGGAGGTTTACTGCAAAAAATCATTATCCATGTCTTATCAACGTTAGAAAATCCTTGTTTAAAGTTAG # Right flank : ATGAGTACTTATCATCTATTAGTTCGAATAA # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATATCTTAACTATGTGGGATGTGAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 10920-12663 **** Predicted by CRISPRDetect 2.4 *** >NZ_ARZA01000015.1 Caldisalinibacter kiritimatiensis strain L21-TH-D2 NODE_182, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 10920 29 100.0 39 ............................. TCTATTGAATATCTGTATGTTGCATCATTAAGTGCTCCA 10988 29 100.0 37 ............................. TAGATACGAACTGAGGTTTCTTCCTTTGTTGGAAGAT 11054 29 100.0 37 ............................. GTGAAAGGCTCTACTAAGATTTATGAAGGCAGTTTAG 11120 29 100.0 38 ............................. AATTAATATGCCAAAAAGAGAGTTTATAGGCATATCAG 11187 29 100.0 39 ............................. ACAAAACTTCTATACATTACTTTTTTAGTCAAAGAAAAT 11255 29 100.0 36 ............................. TTACTAAGTTAGGAGGGAGTTAGATGGCTGTAATAA 11320 29 100.0 36 ............................. AGAAAATTGAAGCAAGGGCAAATACAGGTTTTAACA 11385 29 100.0 38 ............................. CTCTTAGCGATACCGCAGTAGCTGAATATACCAAAATA 11452 29 100.0 37 ............................. AGGTCTCCATAATCTTCTTTCCTGAATTCAATACATT 11518 29 100.0 37 ............................. GAACGGTTTATAAGTACGTTAAACAACAATATACACC 11584 29 100.0 37 ............................. CTGCGTCTATTATCACAACCTTTACGGTTCCATTCCC 11650 29 100.0 37 ............................. GTGGTGAATTCATACTCTATAATGACGAAGGAGAAGT 11716 29 100.0 38 ............................. GGTGTTGGGGAAGCTAATATATTTCCACTTTGGGCAGG 11783 29 100.0 35 ............................. GGAGCAGACGGTGGATATATTGTACCAGTTGATGA 11847 29 100.0 35 ............................. TCATCTAAGTAGCTTTTTATGGTCTGTATGTCCAT 11911 29 100.0 36 ............................. CAGCATATGAAAATGTAAAGGAGTCATTAAGAGAAG 11976 29 100.0 37 ............................. AACAATGTGTCAAATATTACTGTAAGTGGGCATGGTG 12042 29 100.0 38 ............................. GTGTACCTGTGTAACTATTCATTCTTTTAGAGAACTTC 12109 29 100.0 35 ............................. TTAAAATCGATTTTAAGCAAAATTTTATACTTAGA 12173 29 100.0 37 ............................. ATTCCTTCTTGGCCGGAGTCGCCATCAGCAAATAATT 12239 29 100.0 38 ............................. TGTATCAGCTTTACTATCAACTCTTTGATTTGTTTCTC 12306 29 100.0 38 ............................. ACTTTAGACACTTTACTGAATAGAACAGATGATATTAA 12373 29 100.0 37 ............................. CATTATGGATTGTGACTTTTGGTCGATAATCCCTTTT 12439 29 100.0 36 ............................. TCTTCTATATTTACCATTAGGTCCTTTACCAGTAAA 12504 29 100.0 38 ............................. AACTCTAGAGCTTCAGCACCAAGCTAACGAAATTATGG 12571 29 100.0 36 ............................. CTAGAAATAGCTGTAGGAGAAAAAATAACTATAGAT 12636 28 86.2 0 .....................-...TT.T | ========== ====== ====== ====== ============================= ======================================= ================== 27 29 99.5 37 GTTTCATCTTAACTATATGGGATGTAAAG # Left flank : CATTTTATTGGAGATGAAGTTTATAAACCATTAAAGGCATGGTGGTAATATGTTTGTTATACTAACATATGATGTAGGTGAAAAACGGGTAAATAAGGTCAGAAAACATCTGAAAAAATATTTGATATGGACCCAGAATTCGGTGTTTGAGGGAGAAATTACAGATGGAAAATTAAAAAAATGTTTATCCGAATTAAATCATATACTGAATAGAGAAGAGGATTCTTTATATGTATATGAAGTTAAGTCACCAAAGTTTATTACAAAAACTATTTATGGACAAGAAAAAAATATAGATGAATTATTTTTATGATTTTGCAGTAAACCTATGTTATTAAATGAAAGCTTATAAACTTTGAAAATTCAATGATAAAATTAATTAAATGTGGCAAGGTAAAAAACACAACTGATACTTTACTGCAAAAACGACGAATTTGCAGTATTACATAACTAACTTAAATGTAGTAAAATAGACGTATAAGGGTATTTTAAAAATTAGG # Right flank : GATAAATTAAAATTACCCTAGTATAATAATTGAAAAATCCCCTAGAGGAA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCATCTTAACTATATGGGATGTAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 474-41 **** Predicted by CRISPRDetect 2.4 *** >NZ_ARZA01000044.1 Caldisalinibacter kiritimatiensis strain L21-TH-D2 NODE_124, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 473 31 87.1 33 TTT.......T.................... AGTTAAAGGCAGAGATAGAAAGGTTTTTAAATG TAA,G,C [460,464,467] 404 31 100.0 36 ............................... GATATGGGTCATCAATTCTATTTCTATTGCTAAACT 337 31 96.8 36 C.............................. GCTTACAATACCATTCAAGGTATTTCAAATGTAATC 270 31 100.0 34 ............................... TACTTATAACAGAAGGCCTTGGCTCTTGCAACAC 205 31 100.0 35 ............................... GGTCTATAGCTAGAAGAGCTGCGTTAGCAAGAGAT 139 31 100.0 37 ............................... TACTGGAGAACAAGACTTTCATAGTGGCATAGATATT 71 30 74.2 0 TC..........TG...T..C...-.....A | T [53] ========== ====== ====== ====== =============================== ===================================== ================== 7 31 94.0 35 AACTTTACATCCCATATAGTTAAGATGAAAC # Left flank : GGTCATTTATTGCATCCTTTAGCTTGAATATTTCTAAATATTTTTCTATGCGTTCAGCTCTTTCTTCTTTTGATACCCCATAAACATCAGCCATAAAGTTTAAGTATTCGATTCCAGTAAGCCTATCATATACTTCTGGAGCATCAGGTACGTAGCTAATAAATGATTTTGCTTTTATTGAATCTTTTTGATTATCTACACCATTTACATATATCTTTCCACTGTCAGGCTTTAATAGTCCAACTACCATTTTTATAGTGGTAGTTTTACCTGCTCCATTTGGTCCTAAGAAACCAAATATCTCCCCTGATTTTGCGTGAATACTTATATTGTCAACCGCTTTAATTTGTCCTTTATTATAGGATTTTGATACATTTTCTATCTTTAACACAATTATCCCCTCTCCAACTGTATAGATTGTAATATAAATATATTATATAATATATTACTATTTTTTCCTAGAAATACTTCAACTGGTTGATTTACTTTCTATTTTGATG # Right flank : AATCCCCCAGAATTTAATTGAAACTTCCCCTAGTGGAGGAA # Questionable array : NO Score: 3.02 # Score Detail : 1:0, 2:0, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AACTTTACATCCCATATAGTTAAGATGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.68 Confidence: LOW] # Array family : NA // Array 1 234-67 **** Predicted by CRISPRDetect 2.4 *** >NZ_ARZA01000198.1 Caldisalinibacter kiritimatiensis strain L21-TH-D2 NODE_142, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ===================================== ================== 233 31 100.0 37 ............................... ATACTTGTTGTAATCATACATAATAATAAAGTTAAAA 165 31 100.0 37 ............................... TTTTTATTAACGTTATGACCTTCTTTTTTTAATATTT 97 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ===================================== ================== 3 31 100.0 38 GTTCTAATCGTACCAGTAGTGGAATTGAAAC # Left flank : ATAAAGGATAATCATATAAAAGCAGCCGGTGGAATTAAAGAAGCTATATCAACTTTAAGAGAAAAGATAGGTCATACAGTTAAAGTTGAAGTTGAAGTAGAAACTTTAACTGAACTTAAAGAAGCTATTGAAGCTAAAGCGGATATAGTAATGCTAGATAACATGAGTATAGAGGACATGAAAAAAGCAGTAGAAATAAATGAAGGTAGGGTTATACTAGAAGCTTCAGGTAACATTACATTAGATAATATTGAAGAAGTAGCTAAAACCGGTGTTGATGTTATTTCATCAGGAGCATTAACACATTCAGTTAAAGCTTTAGACATTAGCTTGAAGTTGAGGGATTGAAAATTGAAAATGTCGTCGACCTCCGGTGATGCAAAAACCCCCGAGGGTCGACAAACAAAAAAGTCCTTCAAATCCTGATAACTTCGTGATATAATATTTATGAAATGAAAAGGTTATAAATGGTAAACCTTTATTTTTACAGGTTTTTGATG # Right flank : CTAGGAATGGACTTATGTCAATATTTTAGACACAAAAAATCGAACATTTTTGTGATTTTAAATAGTA # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTAATCGTACCAGTAGTGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.70,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA //