Array 1 25690-23438 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPFU010000037.1 Eggerthella lenta strain J1100102_180507_B8 NODE_37_length_33416_cov_44.7416, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 25689 33 100.0 37 ................................. TTGCCGACGTGCTGGACGGCTACAACCGCACCCACGA 25619 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 25553 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 25487 33 100.0 32 ................................. GAGTTCGTTACCGACACGATCGGCCTCATCGG 25422 33 100.0 34 ................................. GAGCTCGCCTGTGTACCCGTCGTTGGTGACGATG 25355 33 100.0 34 ................................. ACGTTGCCCGGATCGAGCTTGAGCGCGCGCTCGA 25288 33 100.0 35 ................................. TCGACGACGGCCCTCACGTCGTCGATGGTGCGGCC 25220 33 100.0 34 ................................. TATCACATGGAGCGGACGAGGTTCTCCGCGCGAG 25153 33 100.0 34 ................................. ATCTTGGGCGTGCCGGGAGCGGGCAAGAGCTTCA 25086 33 100.0 34 ................................. ATGGCGAGTACTTGGACGTAGTTGACGGTCGCCG 25019 33 100.0 36 ................................. ACGTATACGGGCTTCGCGCCGGTGCCGTTGACGTCC 24950 33 100.0 33 ................................. GACAACGCGATGGCCAAGGTATCGACCATCGCG 24884 33 100.0 33 ................................. GATCCGCTACGACAACGTAGGGGATCAGGCCGA 24818 33 100.0 36 ................................. AATGAATCGATCAAGCGCGCCAACGGCGAACTCACC 24749 33 100.0 34 ................................. GAAACCGTGCGCGACGGCGGAAGCAAGCTGGACG 24682 33 100.0 34 ................................. AGGCCCTGTCGGCCCGGTCGGCCCTGTCGGCCCC 24615 33 100.0 34 ................................. ATGTCGGCCTTGGTGAACTCGGACAGGTCGAAGC 24548 33 100.0 33 ................................. ATGCTACTAGACGATTTTTTTGTTCCGAAATTG 24482 33 100.0 32 ................................. GGGCTGACGACCCAAAGAAAAGTCAGCGCCGC 24417 33 100.0 34 ................................. TACTATGTTTACAGTACCGAGGAGCTGAGGCCGT 24350 33 100.0 37 ................................. TTGCCGACGTGCTGGACGGCTACAACCGCACCCACGA 24280 33 100.0 33 ................................. AGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTG 24214 33 100.0 33 ................................. TAAACGAACTTGAACAGACGCATTTTGATAACC 24148 33 100.0 33 ................................. TGGCAGCCTCTCGCAGGGTCTCGGCTGGCTCAA 24082 33 100.0 37 ................................. GAAAAGCTGCACCGGCGTGCCGACCGTGATGCCGTTA 24012 33 100.0 36 ................................. GGCACTGACGTGAACGAAAGCGTCAAGGCTGCAAAC 23943 33 100.0 33 ................................. CCCACCGCGATCACCCAGAACGTCGAGTACCTG 23877 33 97.0 33 .............C................... ATGTCGGGGAAAAGGCGCGAACCCATGTAGGCG 23811 33 100.0 38 ................................. CAGGTAGGCGTTGACGGCCTTGTCGTTGGCCTCGGCCA 23740 33 97.0 33 ..T.............................. CTACGATGCCATGGCGTCCTATGCATTCACGGG 23674 33 97.0 34 ......T.......................... GAGGAATATACGCGATTCGTTGAAACGGATGTAG 23607 33 90.9 36 A.....T...................G...... GGCACCGCGGTGTACTCCGTGCTCGAGAACGCGCGG 23538 32 93.9 34 .................-..............C TGTTCGGGTTGGCTGGCAAGCTGAACGCTGACAC 23472 33 75.8 0 .....GTT.A..T.....C.C..........G. | C,T [23456,23468] ========== ====== ====== ====== ================================= ====================================== ================== 34 33 98.6 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : GCATGGGGAGTGCGGGTTGAAATCCGTGCTGCGCCCGCCCAATTCCATGAAAAGGCGTCACTCCCCGCATGGGGAGTGCGGGTTGAAATCAAAACCGAGAGGATGCTCATATCCGACGGCCGCGTCACTCCCCGCATGGGGAGTGCGGGTTGAAATAGGCCCTTAAAGCCCGCAATTACGACCTGTTGAGTCACTCCCCGCATGGGGAGTGCGGGTTGAAATACCTTGTAAAAGCCGTCGATGCGCGCGTACTCGGGTCACTCCCCGCATGGGGAGTGCGGGTTGAAATTACTATGTTTACAGTACCGAGGAGCTGAGGCCGTGTCACTCCCCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCACTCCCCGCATGGGGAGTGCGGGTTGAAATTACTATGTTTACAGTACCGAGGAGCTGAGGCCGT # Right flank : CGCGCGCAGCTGTCGTGGTACGGCCGAGGCGTGGTCGGTCGTACCACTCGCGGGCGCGCGGGTAGAAGCAGGGTATCCGGGTTGAAATCGAGCAGCGTTTCGGCAGGTTCTGTCGCTCCCTAACGAAGGGGCGACCGATCCTTGCCGTCGCTTCCTATCGAGAACGCGGATTGATTCGCTGATTCCGAGTTTTGCTCGTCGGACGTCTGCGCCGAGTTGCGAAAGGCGCAGACGTCCTTCGGATCGCTACTCCACCACCAAATCAACGAACTCAAACGTCGTGCAGTCAACCAGGCCGCGGTTCGTCAGGCGCAGTTCGGGCAGGCATGCTAGCGGGATCAGGGCCATCGTCATGAACGGCGACGGCATGGTGCAGCCGATCTCGGCCCATGCGCCCTCCAAAGCATGTACCTTCTCGCTCATCGTTACGGCGTCGAGCGAGTCCATCAAACCGGCGATAGGAAGCTCCACCAACCCCAGGATCTCCCCGTCGGCGACCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.20,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 27739-25901 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPFU010000037.1 Eggerthella lenta strain J1100102_180507_B8 NODE_37_length_33416_cov_44.7416, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 27738 33 100.0 34 ................................. TTGTAGTACCTGTTCAGCCTTTCGTAGGAACTCG 27671 33 100.0 34 ................................. TAGCCTCCTTGTCTCTAACCTTCGCGGCGTTCCC 27604 33 100.0 34 ................................. CAGATCGCGAAAGCCGTCAACGAGCGGCGCAAGT 27537 33 100.0 34 ................................. TCACGCAGCAGGAGATAGACTACATATCGGCAGA 27470 33 100.0 35 ................................. TACGATTTCATCATGGCGGCCAACGAGGAGAAGGT 27402 33 100.0 34 ................................. ATACGGTGGAACGCGGTGCGCACGTCGGGAAGCT 27335 33 100.0 34 ................................. ACGATGCCGGTTCCGACGACCGCGGCAGACAGCT 27268 33 100.0 33 ................................. TTCGCCGTCGAAGGCCAGACGCTGCTCCATGTG 27202 33 100.0 33 ................................. ACGTCCAGGTTGCCCGCGTATCCGGGCACCTGC 27136 33 100.0 34 ................................. AAAGACCGTAAAAGGCGGTATTATACTATACGAA 27069 33 100.0 37 ................................. GGCAAAATGCTCGGATATGATGAAATTCATCGAAGCA 26999 33 100.0 33 ................................. CTCATAGACCATTTGTTGAAGTCAGGGTGGGAG 26933 33 100.0 33 ................................. AAGCGCGGTTATCTCGACTTCGGCGAGACCGTC 26867 33 100.0 34 ................................. CCTTATGATGCGTTTTGCAAGATTCGTCCAATTC 26800 33 100.0 36 ................................. CCCTGATGGAGCACAATGGTCAGCGGCTCATACGTC 26731 33 100.0 34 ................................. TGCATCCCAATAGAATTTGGGGATGACCATCGTA 26664 33 100.0 34 ................................. CAGCGTGAAAGCGTTGCTATTGGGCATCGTCAAA 26597 33 100.0 34 ................................. CACTCGACGCCCGTCTGAAGCACGTTGATGCCCT 26530 33 100.0 33 ................................. ACGATCAGCCCGCCGTCTATCCGATGGCGCAGC 26464 33 100.0 33 ................................. CAGATGTCGCCGTTCATGGGCGCTTCAAGATCG 26398 33 100.0 33 ................................. CTCATAGTATGCGGGGCGCTGATGCGCGCCCCG 26332 33 100.0 33 ................................. CTCATTGGTGATCTCAATTCCAACCGGCACGAA 26266 33 100.0 34 ................................. TCCAGTATACAGAGCGTTGCGCAAGTTGTCCTGG 26199 33 100.0 33 ................................. CCGTGCTGCGCCCGCCCAATTCCATGAAAAGGC 26133 33 100.0 34 ................................. CAAAACCGAGAGGATGCTCATATCCGACGGCCGC 26066 33 100.0 33 ................................. AGGCCCTTAAAGCCCGCAATTACGACCTGTTGA 26000 33 100.0 34 ................................. ACCTTGTAAAAGCCGTCGATGCGCGCGTACTCGG 25933 33 100.0 0 ................................. | ========== ====== ====== ====== ================================= ===================================== ================== 28 33 100.0 34 GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Left flank : GCGCGGCGATCTAGACGGCTACCCGCCGTTTCTATGGAAGTGAGATGGTTGGCATGCTGACAGTGATTACCTACGACGTGAATACCGAGGATCCGGCAGGCCGACGTCGCTTGCGAAAAGTGGCGCGACATTGCGTCAATTACGGTCAGCGTGTCCAGAACTCAGTGTTCGAATGCGTTGCCGATGCTGCGACGATGGTTCGTATCAAGAGCGAGCTCGTCGAGCTGATCGATCCGGAGAAAGATAGTTTGCGATTCTACAGTCTTGGAAGCAAATATGAGACGAAGATTGAGCATGTAGGTGCGAAGCCAACGTACGAAGCTGAAGGGTTCTTGGCATTGTAGGACCATGGTGCGAGCACGAAGCTCGCATATGACATACGTGAGGTTCGCACCAAATAGTGTGACATAAAGATGCCTGACGCGCTTGTTGCGTGTACCTTGTTTGTCTATTGGCGCTATATGTTGATCGAGGCAGTAAATTTTGCGCATAATATTGCG # Right flank : TACTATGTTTACAGTACCGAGGAGCTGAGGCCGTGTCACTCCCCGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCACTCCCCGCATGGGGAGTGCGGGTTGAAATTACTATGTTTACAGTACCGAGGAGCTGAGGCCGTGTCACTCCCCGCATGGGGAGTGCGGGTTGAAATTTGCCGACGTGCTGGACGGCTACAACCGCACCCACGAGTCACTCCCCGCATGGGGAGTGCGGGTTGAAATAGCCTCTTTTCGCTCGTCGCGTTCGTCGAGCTGGTCACTCCCCGCATGGGGAGTGCGGGTTGAAATTAAACGAACTTGAACAGACGCATTTTGATAACCGTCACTCCCCGCATGGGGAGTGCGGGTTGAAATGAGTTCGTTACCGACACGATCGGCCTCATCGGGTCACTCCCCGCATGGGGAGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.20,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //