Array 1 2908032-2912758 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059546.1 Acinetobacter baumannii strain 10_4 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================== ================== 2908032 29 96.6 31 ............................A ATCGTCTGGAGCAGGTTCAATTTCAGGAATT 2908092 29 96.6 31 ............................A CTAAAAACAGGCTTAGCCGTAACCTCATATT 2908152 29 100.0 31 ............................. CAATCAGCTTTCGACAGTCTGATTGACTTAC 2908212 29 100.0 31 ............................. TTTAAATATGTATCTGAAGAGTGCGGATTAG 2908272 29 100.0 31 ............................. TTAAAGGTCAAAGCAAACTCTTGAAATAATT 2908332 29 100.0 31 ............................. ACAAGTTTTAATTGGCCATCCTTTGTTGTGT 2908392 29 100.0 31 ............................. TTTGAACATTGTTTGCCAATGCAGGGCGCAT 2908452 29 100.0 31 ............................. TTTAACAACTTTTTCTTATACGCTTGTGGTT 2908512 29 100.0 31 ............................. TTGCCACAGTGATAAAAATAAAGTTCTTTAT 2908572 29 100.0 31 ............................. TTGGCAAGTAAGGCCTTTGCGTCTTCTTTTC 2908632 29 100.0 31 ............................. AAAGCTGCCGATCCGTTGCAAAAGAAGGTAG 2908692 29 100.0 31 ............................. ACGCCTGAGCCTCAAACCATTAGTGTGCTTG 2908752 29 96.6 31 ............................A CAACGCAAGAGCCACAACAATGATGTAATAG 2908812 29 96.6 31 ............................G ATGCAGAAAAATTAACTGAGGCATCAAAGCA 2908872 29 96.6 31 ............................A TAAAGCGGCCCCAACTGCTGACGAATTAAGT 2908932 29 96.6 31 ............................A TGTCAGTCGCAGCTGAAATGAGTTTTCCTAA 2908992 29 100.0 31 ............................. GGTGGTGTTTATACGCAAAGCGGCCGATTCA 2909052 29 96.6 31 ............................A TGGACATAATCTTCGAGGTTGAGGAGATGCT 2909112 29 96.6 31 ............................A GACACAAGTTTAGCAGGTAACTTAATTTTAC 2909172 29 96.6 31 ............................A AATTGACCAGGCTACAAACCAGTGCCTTACC 2909232 29 100.0 31 ............................. ACTGAAAGAGTAACCAACTGTTTAAAAAAAC 2909292 29 100.0 31 ............................. TTCTTATCTACTGCAAAGGGAATGATTAGAG 2909352 29 96.6 31 ............................A AAAAGGCACAAAAAAGACTGACGGGCAGCCG 2909412 29 100.0 31 ............................. GATCAAATTAAAAGTATTTCGGGTCCTACTG 2909472 29 96.6 31 ............................C TTCAATGTGTTTAAGATCGGGTCAAAAGCTA 2909532 29 96.6 31 ............................A TGCAGAAGCGGCAATTGAAGGGAAGCCTTTG 2909592 29 96.6 31 ............................A CTGGCTCAATACTTGGTGAACTCGCAGTTAA 2909652 29 100.0 31 ............................. TCTCAGAGTTAGTCATTTGGCGTGGTTGTTT 2909712 29 100.0 31 ............................. GATCAAATTAAAAGTATTTCGGGTCCTACTG 2909772 29 96.6 31 ............................C TTCAATGTGTTTAAGATCGGGTCAAAAGCTA 2909832 29 96.6 31 ............................A GCCTGATCCCGCTTCACCATACATTGCACGC 2909892 29 96.6 31 ............................G TTATGTGGCATATACGCAACAAGGTACGATT 2909952 29 96.6 31 ............................A CAGTAGTATCATTTCAATCGAGTAACGTTGA 2910012 29 96.6 31 ............................A AAAAGACCCAAAGAAATTCGCTCGTTTCTTT 2910072 29 100.0 31 ............................. ACACGGCGATCTTGTTTAATAGTCTGAGTTT 2910132 29 96.6 31 ............................C AATACAAACATTTGACTGCACATCTGGAACA 2910192 29 96.6 31 ............................A GAAACATCTGTTATTTTTATTGATGAGGTAC 2910252 29 93.1 31 ...T........................A CCCTTTGGATTGAAGACTCTGCTTTTGCTGC 2910312 29 96.6 31 ............................A TTCACCAGCCTCGGCTAGACTTGATGCTCCT 2910372 29 96.6 31 ............................A AGCAAAATTCAAAAGAATTACCCCAGCCAAG 2910432 29 100.0 31 ............................. TGGTGTGCCTGCGCCCACTCAAGCCATGATT 2910492 29 100.0 31 ............................. TTAACCGAGATCAAGAAGTAATTGCTTGGGC 2910552 29 100.0 31 ............................. ACAATACGACGTGATAATGCAACTAAAGCCC 2910612 29 96.6 31 ............................A CGGTAAAATTAAGTTACCTGCTAAACTTGTG 2910672 29 96.6 31 ............................A ATCAAAGCCTTAATCGCTAAATCAACTGCTA 2910732 29 100.0 31 ............................. TTTGTTTATACGGTTAATAAATCAGTACAAT 2910792 29 96.6 31 ............................A TTACACAGGCATGGCAATGAAAGTGTTCTTT 2910852 29 96.6 31 ............................C CTCGTGGAAAAACTTAAAAGCCATCTTCGTA 2910912 29 100.0 31 ............................. TCATCTAAATGTTTTTGACGTTCAGCTTCAG 2910972 29 100.0 31 ............................. AGACAGCTCATTTAATCCGGGTGAGAAACAG 2911032 29 100.0 31 ............................. GCTTGGACCCATGAAATTAAAGGAACTTTCC 2911092 29 100.0 31 ............................. AGATAATGTTGAATGGGTTGAAACTACCTAC 2911152 29 96.6 31 ............................A GTTCAGCATTCCCCTTCGGGGTCAACGTCCA 2911212 29 96.6 31 ............................A TTACCCCTCCTTACTTTCTGCTTTAACTTCT 2911272 29 96.6 31 ............................A AAACACCAAGCCATAAAATTAATTACAGCAA 2911332 29 100.0 31 ............................. GTTTTGCTAATTTATCAATATCGATTTTCAC 2911392 29 89.7 31 ...AC.......................A CAGGGGTCAAGTTCAGAAGATTTACGTTACA 2911452 29 82.8 31 ...GC.......CC..............G GTATTAGTGCGAATTGGCTTTTAGCCCACGC 2911512 29 93.1 31 ....C.......G................ TAAATGCTCAACTATTTCTGTAGCTAATGGA 2911572 28 86.2 31 ...GC....T...-............... TCAAATGATTTAATGAGCTTGTAGCCATTTT 2911631 29 86.2 31 ...GC.......T...............A CGTCTTCTAATGATGGACTTTAATCCAATAT 2911691 29 79.3 30 A..GA.......TC..............A TCTCACTGAAGATATGACCATCACTTTCTT 2911750 29 79.3 31 CG..C.......CC..............A AGCCATTTACTTTGATAAAGCGTCACATAGC G [2911752] 2911811 29 100.0 31 ............................. AGGAAATTCTATCGGCCCAGCATCTACAAAT 2911871 29 96.6 31 ............................A AGAGACACATCGTTAATAATCTCTTTTGCGG 2911931 29 96.6 31 ............................A TGAGCAAATTATCAATTGATCTATCTGCAAG 2911991 29 93.1 31 ............CC............... AGACGGTGTTACCTGTAGGCGGTGTCTACTG 2912051 29 86.2 31 ...TC.......C...............A TCGTTTGAATAATATGGACAATCCAGCCAAT 2912111 29 86.2 31 ....G.......TC..............G CAGCATCAAACGAGATATTGGCTAACATATT 2912171 29 79.3 31 ...G......A.CC...........C..C AAATAGTTTTAGCTATCTGAGCATTTAATTT 2912231 29 93.1 31 ....G.......C................ TCATCACGTAGCCTTTTACACGCATCTTGCG 2912291 29 96.6 50 ....................C........ GTACGCTGAGTATTGATATTGACATTCAGGGCATTCAGAATTTGGCGCTC 2912370 29 89.7 30 ....G........C..............C CAGTTTGCTGAAAATCACCAATACGGTCTT G [2912394] 2912430 29 79.3 31 ...TC......TCC..............G ATTCTATGAGCGTGACCATGACTCTATTTAA 2912490 29 86.2 31 ...GC.......C...............A TTATCCAGATAAAACCATATCTACAAAGTGG 2912550 29 93.1 31 ....G.......................G ATCATCTACAGTGATTGAATAAACGGTTTTT 2912610 29 82.8 31 ...GC......TG...............C AACGACGACGCCGTGTGTTTGTTATCGGAAG 2912670 29 79.3 31 ...GC....T..TC..............C AAGTAGGATTTGCAGCCCCAATAGTCTTTAT 2912730 29 79.3 0 ....G....T...C.A........AT... | ========== ====== ====== ====== ============================= ================================================== ================== 79 29 95.0 31 GTTCTTCATCGCATAGATGATTTAGAAAT # Left flank : ACGTTGGGCTAAAACGTTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAATTTATTCGTGATGAAGGAAAAAACTCTCAAGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGAATGGGAATTAGTTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCGGACCTAGTTAAAGATGCTTTTGTTATGCCAGTCGCTTTTACATGTGCAGCAAAAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACATTTAACCCAAATACCTTATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAAAAAACCCCGAAACTTACGTTTCAGGGCTTTTTCGAATCTTGGTGGGATGGCGTCATTTGAACTGAATAAACAAGTTATTGATTAATAAATATATTAAAAAATAATTTTTTTCTATGATACAAATAGTGATACAAAATAATATTTATTAGTCTAAGAAATTCTTCTCACTACCTATCAATTTTCCACTAAGAAAAGAAGATGAAAATAAAGCGTATAACTAGCTATACCACTACTCGACTTTAAACCAATTCGTATGATTCTCTAGAATAAGCTAATCTTCTTTTACCTTACTGTTAACCTTAAAATTTTAAGAAAACACCCTCCTCTCCTACATCTAAAAAATCTCCTAAAGTATAACAATCTTACTTAGCCACAAGAAATTTATATTTAACAAACACTTAATCTGTTTTTTCAAAGTCCTCAAAACATAATAAATGTTTTAATCCATTATATTTCTTGGTATCAAGTAATTTATTCTCATC # Questionable array : NO Score: 5.45 # Score Detail : 1:0, 2:3, 3:0, 4:0.75, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTCATCGCATAGATGATTTAGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTCTTCATCGCATAGATGATTTAGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-69] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //