Array 1 65917-59819 **** Predicted by CRISPRDetect 2.4 *** >NZ_QKVG01000008.1 Acinetobacter baumannii strain B6 20-B6_1_(paired)_trimmed_(paired)_contig_8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 65916 30 96.7 30 ............................G. TTAGCCCAATACTGTGATGAGTTGGTACCA 65856 30 96.7 30 .............................A TGTGAGCTAATGAGCACTACAGATGCAAGC 65796 30 96.7 30 .............................G AAGCAAAATACGCACAATAAGAGCTTCTCA 65736 30 96.7 30 .............................A ATCCCCGTGCCATAGCATCAAGTACACCAG 65676 30 93.3 30 ............................GA TCATCAGTCGGAATTATCTAGAAAGATAAC 65616 30 100.0 30 .............................. GTAGAAGATCTGCGATTTTTACGCCCTGTA 65556 30 100.0 30 .............................. ATTAAAATATTCTAATTTTGGCTCCTCACA 65496 30 93.3 30 ............................AG CTTGTAATGAAACAGGCTTTAGCATTGCTA 65436 30 96.7 30 .............................G TACACAATAATTTGATCTTTTGTCCTTTGC 65376 30 93.3 30 ............................AA AATGAAATTTGCTAATGAAGCTATGTATGG 65316 30 96.7 30 ............................A. ATGTTTGTTGGCAGATTATTGATGCTAATC 65256 30 100.0 30 .............................. TAAGTGAGGCGATTAAGACATCCAGAGAAA 65196 30 93.3 30 ............................GA CAACCCATTGAACTTCTTTACCAGATAAAG 65136 30 96.7 30 ............................A. TAGGATCAGGTAAATCACCCTCTTCTCGAC 65076 30 96.7 30 ............................A. ATACAATCCTGTTTTTAACTTAGATGAAGT 65016 30 100.0 30 .............................. AGCAATTATCGCCATTCTTGTATCTTTTTA 64956 30 93.3 29 ............................CA CAAGAGAAAGATCGTTCAGGCTCAAAACC 64897 30 100.0 30 .............................. GTCTCAATTTATTGTAAAAACCACTTATAC 64837 30 93.3 30 ............................AA CATGGTAGGATAATAATTTAGCCGCCCAAT 64777 30 96.7 30 .............................A CATGATGCGTCGTTTCGCAATTAGAAAAGG 64717 30 93.3 30 ............................CC GAATAAGATGCGTAACGGAATCCACCCGCT 64657 30 96.7 30 ............................A. CAGCATATTCGACATCCGTTTTGTCGTGAG 64597 30 93.3 30 ............................AC GCAATGCCCCAGTTTTACTTCGCAAAGAAT 64537 30 96.7 30 ............................A. CCCAATAAGTTATTGCCCTAAATACCCCTG 64477 30 93.3 30 ............................GA AGCGATTGATTCCATTAATCTTGAGCTTGA 64417 30 93.3 30 ............................AG TGAGGATTCACACCTAGAAACTGGGCAGCT 64357 30 96.7 30 .............................G CTGCTTGAACAACATGAATTGCCCATTCAG 64297 30 93.3 30 ............................AA AAATATTGATACGATGGATTAACAACAGAA 64237 30 93.3 30 ............................AG AAGCGTCATGAATATTTGGTTTGGCTTGAA 64177 30 96.7 30 .............................G ATCATTAGTGCCTCTTCGGAAATCAACTTT 64117 30 93.3 30 ............................AA AGAGTATGTATTAGAGGGCTATGCACTTAC 64057 30 96.7 30 .............................G AAAATAATTAAATGGTCTATCACCGTCTTC 63997 30 93.3 30 ............................AG TAGATGCAGCACACAGCAATCAGGGCGCTC 63937 30 93.3 30 ............................AG CGCGGAAGAGCATTCGGGTGAGTTGGATTA 63877 30 96.7 30 .............................C CAAAAGAGCAAGCAGAATTTAGTGCATGTA 63817 30 93.3 31 ............................CA CCAACCGACAATGTAGCATCGGCAACTAAAC 63756 30 96.7 30 .............................A TGACACGCTATCAAGTGACGGTGCAAATAA 63696 30 100.0 31 .............................. ACTAGCCCATATGTCTAAACCGAATCCACGC 63635 30 96.7 30 .............................A AACCATTATTAGGGTTTACGGTATTACTTG 63575 30 93.3 30 ............................AG TCCATAAGACCCTCCATTTGTTTATATCTT 63515 30 93.3 30 ............................AG AAGGGTATAGCAAATATCGTGATGGAAATG 63455 30 96.7 30 ............................A. CATCGCCAGCAACAAACTGCAATGAGCCAG 63395 30 100.0 30 .............................. GGTGTGATCATCAATACAGATGGGACAGGT 63335 30 93.3 30 ............................CG ATAGAAGATACAGAAGAAAATAATGCTATT 63275 30 100.0 30 .............................. TCAGATGAAACCATACGCACTAAATGCATT 63215 30 96.7 30 ............................A. GTAATCTTGGTATGGGAGGTGTAAAGCCAG 63155 30 93.3 30 ............................CA AAAAAGAGCTTGCATATACAGATTCTAGTA 63095 30 100.0 31 .............................. GGTGTTGAACAATGCTTAAGTGAAATCACAA 63034 30 96.7 30 .............................A TATCAATCTTGTTAAGAGAAGCCGCATCAT 62974 30 96.7 30 ............................G. GATGTGTATGTTCTATTAGTGGTGTAAATC 62914 30 93.3 30 ............................AA TCCCGCTTAGAACTTGTAAACAAAATTCTG 62854 30 96.7 30 .............................A GTCCCGAAATTTCAGTAGGTGGCTCATAGC 62794 30 93.3 30 ............................AA TCCCGCTTAGAACTTGTAAACAAAATTCTG 62734 30 96.7 30 .............................A ATACACCAATCCCGCTTAGAACTTGTAAAT 62674 30 93.3 30 ............................GC AATCTGGTTATCCGATTCCTATTTATTTTG 62614 30 96.7 30 ............................A. CATCATTGCAGTCTTATAAGAGCCAGGCTG 62554 30 93.3 30 ............................AA ACTGCATAGATGACCATTAGAGACATCCCC 62494 30 96.7 30 ............................G. AGTGGGGACATTGTGTACGCTCATGATGTT 62434 30 96.7 30 .............................C ATGCCAGTTGCAAAGTCCAAGCCCACTGCT 62374 30 96.7 30 .............................A CTAACTGTAAAACAGAAGACTTGCCAACTT 62314 30 93.3 30 ............................GG TTTAAGTCCCCGAACATTACATAAGTAAAT 62254 30 93.3 30 ............................AA TGGCATTTGCTGCTGACGGGGATTTCGACT 62194 30 93.3 30 ............................AA ATCAAAATCGTGGCAGATAACAAAGCGATC 62134 30 96.7 31 .............................A ATCTCGGTATTTACGCCAAGGGCGCTATTCA 62073 30 96.7 30 ............................A. GATCTACCCTTTGAGCTAGATAAAACTTTT 62013 30 100.0 30 .............................. CACGTGGTACGCGCTGTAAGCCTGTTTGTT 61953 30 96.7 30 .............................G AGTATCGCAAATCAAACATTGCCAAGCTTT 61893 30 100.0 30 .............................. AGATAAAGCAGGGGATAAAGGGACGTTAGC 61833 30 96.7 30 .............................G TAATACTAGAATCTGTATATGCCAGCTCTT 61773 30 93.3 30 ............................CA TTTTGCGACGCGCTGCATCGTTTAGGGATA 61713 30 96.7 30 ............................G. GTCGGGTAAAACAAGGGTAATGACTTGTGT 61653 30 96.7 30 .............................C TACAAAGGCAATCTGGCTCTTCAATTCGTG 61593 30 96.7 30 .............................C ATAGTTAATATAAATTTATTATGACAAAAA 61533 30 100.0 30 .............................. AGCCGTTTGGACTTTACCAATCTATATTTA 61473 30 93.3 30 ............................AG CAATATCAATTACAGGAATACCACCAGCAT 61413 30 93.3 30 ............................AA TAGAATTAAAACCACGTTGATAATATAGGT 61353 30 93.3 30 ............................GA ATTGCACTTGCTAAGCCAATAATGCCAACT 61293 30 96.7 30 .............................G ATGCGGGTTGTCCACCAGTTATGACTACTT 61233 30 93.3 30 ............................CC AAGCTGTGAATGTTGGTAATGCTTTAAGCG 61173 30 93.3 30 ............................CG TCAAAACAATCAAAAAAGCAATGAGTACAA 61113 30 93.3 30 ............................AG TGAATGGGATTTATTCGCAAGGTGATATTA 61053 30 93.3 31 ............................AA AAAGTTTTTTTGACAATCAAGCCGGCAAGTT 60992 30 96.7 31 .............................G CATCGAAGTCATAGAACGCTTTGAGTTTCCA 60931 30 93.3 31 ............................AG CGACTTTGAATTGATGCCATCTCCGCCTTTA 60870 30 96.7 30 .............................A TTCAGATTGGCTGCGGCCTCACCTGTAGCA 60810 30 93.3 30 ............................GC AAGTGTCACCTTTAAGTGCACGGAAGAAAT 60750 30 96.7 30 .............................C CATTCTCGCTAAGTGGCATCACACGCGATG 60690 30 100.0 30 .............................. GGTTGTTTAGTAAGTTCAAAGCCCGTTGTA 60630 30 93.3 30 ............................CA ATGGATTTAAAGATTTCAACCGCTTGGGAG 60570 30 96.7 30 ............................A. CATCGAAATTTAGTTCTAATTCTTTAATTT 60510 30 96.7 30 .............................C ACTTCTCTTAATTAGTGCTGAAGAATCAAA 60450 30 96.7 31 ............................C. GAATAAGTGAGATGTCTCTATGAGTTCAATT 60389 30 96.7 30 ............................A. TGAATTAATACGGCTTACTGCAATTGGTTG 60329 30 93.3 30 ............................AG TCTTTAATGTCGGCAACATGCTGTGCAAAA 60269 30 93.3 31 ........................A...G. AAAAAAGAACATTTCCAGCAAAAATTGACGA 60208 30 100.0 30 .............................. GCTGCCTGCAAACTTGTTTGGGGCTTTATG 60148 30 93.3 30 ............................AC TGGAATTCAGCAGTAAATAAGGGGTTAAGA 60088 30 100.0 30 .............................. TAAAGCTAAATGAGGGTTAAACCTAAGAAA 60028 30 90.0 30 .......T....................AA CGTGAACAATTGTTTTAGCTTTGAACATTA 59968 30 90.0 30 .............C...T..........G. TACTGGGTTGCGGAATATATTCGCAATTAT 59908 30 86.7 30 A......A.........T..........A. TTTGATCTTTACTTATTCTCGCTTCAAACA 59848 30 73.3 0 .......A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 102 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCCTAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAACAATAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTAAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGTAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAGCCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGCCAAAGTGACGGTGAAATTACCGATGCAAAATCGCAGTTACCAGAAGGTGTCATTATTGGCCGTACTTGCTTAAACTCTTTAGAGCTTGCTCAAAAAGCAATTGCCGATGGCGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAACC # Questionable array : NO Score: 5.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.17, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //