Array 1 12338-10589 **** Predicted by CRISPRDetect 2.4 *** >NZ_LCUE01000004.1 Vibrio metoecus strain 07-2435 contig00004, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================== ================== 12337 35 100.0 39 ................................... ATTAGGTCGGCTTGCATTTGCTTTTGCTTGGCCTCTTGT 12263 35 100.0 36 ................................... ATTGTTATGGCGTTCATCGGTGGTAATGCTTATTCT 12192 35 100.0 35 ................................... GCAATTGCGTTTTCTGCATTGTTTTTAAACGAGGG 12122 35 100.0 36 ................................... TGCATTTCTTCTTTCTCAAATACTTTACTTACTTGA 12051 35 100.0 36 ................................... AGTACCTGCTTTACTAACCATTACAGAAAGAGTAGA 11980 35 100.0 34 ................................... TTTGCAGGTACTTTTCAAACTGCAGTGGAATGGC 11911 35 100.0 34 ................................... TAACATCCCCCACAACCAAGTCACGGTCTTTCGG 11842 35 100.0 39 ................................... TCAATAAAGGACAAGAAAGGGAACTCGTCAGGGTTCTTA 11768 35 100.0 38 ................................... CTTATTTATATCACCACCTATACTTGCGTACTTTAATA 11695 35 100.0 40 ................................... ATTATTGAGATCGCAATTGCAGTTATCGCACTTAATTTCT 11620 35 100.0 36 ................................... AAAGTAGAACGAGAGCATGTGGTTCATTTCTTCGGA 11549 35 100.0 36 ................................... TTTGTCGCCTTCGCTGTCCACGTAAAACTCTACTTG 11478 35 94.3 36 .............T....A................ TTAACGATCGCGGTATTACCGATACCGAGTTCTTTG 11407 35 100.0 36 ................................... CCGTTACGAACGAATGCGCGTCTTCCACTGAGTTTA 11336 35 100.0 37 ................................... TCAAATGAATAAGTGAGATTATCCCCTGCTGTTGTGT 11264 35 100.0 36 ................................... AGAGTTGCTGCAACCGCGCGAACGTTTTCGTCTTTG 11193 35 100.0 39 ................................... TGCCACATGTGACCGCTAACTTGCTCGCAACCGATGTAG 11119 35 100.0 35 ................................... TTGTGGCCACCACTTACCGCCGTTCATTGTTTTAA 11049 35 97.1 34 ......................G............ ACGGCACGATTAATGCGCTTTCTTTGTGTTTTGT 10980 35 100.0 34 ................................... GCACCGGTATCGTCGACATAGCAGCTTAGTTCAG 10911 35 100.0 37 ................................... AGAATAAGCCATGCCTGACCCTGAAACTAGAAGTTCT 10839 35 100.0 36 ................................... GCTCAGGAGTGTTTCCAAGCTCCAAGCATTTGCGCT 10768 35 100.0 38 ................................... TTTCTAGGGTCAAGATCATCAATGTTACCTAAACCTGT 10695 35 97.1 37 .............T..................... TTTTCTGGATCTAAATCGTCGATATTTCCATAATAAA 10623 35 91.4 0 ................................TTA | ========== ====== ====== ====== =================================== ======================================== ================== 25 35 99.2 36 GCTTCATTAGATAAGGTCGTTCAGACCGTTGAGAC # Left flank : TTAGAGAAGTGAAAATAGCGCTGAAACTAGGCAGTGAACCTAAATTTTGGAGGCCTTAAAGCATGAAAGTCTACTTGGCGTGTTTTGATGTTGACGATGATAAGAAACGACGCAGATTGAGTAAGTTGCTGCTTTCCTATGGCGAAAGGGTACAGTTTTCCGTTTTTGAAATTACGCTTAAAAACGAAGCAAGTTTGAAAAAGTTGCTTCAGCGGTGCAAACACCATGTTGATGAGGGAGACAGTTTACGCTTTTATGCTTTACCATTGAACGCCCGAGAAGGCTCGTTTGATATCGATGGGGAGCCAATAGCACGTTTCCCACAGGCCGAAATTCTCTGAAGGTTTGCTCTTTAACAATTTGCCCTTTCATCCGCTGAAAAACTTGGCTAAGCTGAGGTGTCTAAATTTGGTGAAGCGTACCCTGACTTGTGGATAACTTTAGGCTGATCAAAATTGCTCTCTATCTTATTGAATCCGAAACTCAATTTAAGGGTAGGG # Right flank : TTTAGGATGGGATTTGATCCTCGGTATTGGTGGTGAACCTAGTTATACTTAAGGCAACAGCGATAACTTGGAAGTGGTATGCGTTTATTTTTAGATACCGAGTTTACAGGCCTAAAGCAAGACGCTGGGCTACTGAGCCTTGCATTGGTCGATGAGCACGGTAGGGCTTTTTATGCAGAGTGCCAAGCAAGGTATAGCGCTCCAGTGGATACCTGGATTACAGAACATGTGCTTGCTCATACTCGCTGGTTATCCTTATCTTGTTGCGCGCCAAGTGAGTGGAGGCAAGAGGGGCAGGTGCTGTATGGTTTTGATAGTGATGAAAATATTGCCCACCAGCTGAAACAATGGTTAAGCCAGTATGATGAGGTAGAGTTGTGGGCTGATTGCCCAGCTTACGATTGGGTGCTGTTTTGCCAGCTATTTGGTGGCTCGCAGTATTTGCCTCACCCACTCTCTTATGTGGTGAATGATTTCGCTACCCTGCTGACGTTACAAGG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCATTAGATAAGGTCGTTCAGACCGTTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.29%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //