Array 1 8107-7331 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAASHF010000029.1 Coprobacillus sp. K06 scaf_29, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ============================================== ================== 8106 32 100.0 42 ................................ CCTAAGTAATCGCTTGATTGTAAATTTCCATATCCATTATTT 8032 32 100.0 46 ................................ TGTTAAAATTAGTATTTTTGACATCAAAATCACTCCTTATTTATTT 7954 32 100.0 39 ................................ TTTTTAAATATCTTGTATGGTGTTTTCTATTCACCATTT 7883 32 100.0 45 ................................ ACCAATGTCATGTTTCTCATCAATTCTAATACCATTTACTTATTT 7806 32 100.0 43 ................................ CTTGATTAATTCATTGCATAGGTCAATGACTTCTTGACTATTT 7731 32 100.0 42 ................................ ACGCCATCAATTTCTCCGCTACCATTAAAATTTAAACGATTC 7657 31 96.9 39 .......................-........ GTTAGACCAGTGACATAAAGATTCAAATATCTTATATTC 7587 31 96.9 45 .......................-........ CGCCGTAATGTGCGCAGTAAGAGTTTGCGTAAACATCAGCAATTC 7511 31 96.9 43 .......................-........ TTTTCCAACTTTTCAAAACGTGTTTGATAGTTGTTTTCAATTC 7437 31 87.5 45 A......G...............-.......A GCTAATTTGTGTAAGTCCTTTTGTGTTAATGCTACTAAATAATTC 7361 31 93.8 0 A......................-........ | ========== ====== ====== ====== ================================ ============================================== ================== 11 32 97.5 43 GTAATAGTTAACCCCTGTTGGGGGACGGAAAC # Left flank : AGATATTTGAAGAGTATAGAAAATCAATATATCTTTTAGACAAAGAACTCAATGAACAATATCAAGAGTTTGTAGATGAAATGGGTAAAGATATGCAGGTGTTTATGGAATTACTTGATAAGGCATTTGCACCAGATATATCTCTTGCGTTTGAAGGATCTATTGAGTTAGCAAAATCATGTGGTGTTCCAACTGAAGAAATATTAGTTGGTAAAGATAAAGTAGCAGCATATTTTCTTGATTAAGTAAGAACTAATTAGTTTTGAAACGCGTTAAACATTTGATGTTATTATTGAAAGAATTGATTAACTAAAGTATGATAATAGTGTTCTAAATGATGTAAGAACACTATTATCATACTTTTTGCCACGCTACTGATAAATACTAGGAATAATTGAGGTTTTGTAGGAGATTTTAAGGCTATGGTTACAAGAAATAGTTTTGCCACGCATTTAGGTTATTTTAGCTAGTGTTTATCAGGATTTTGTAGGTAAGGATTT # Right flank : CTGTTAGCTGTTTTATTACTTTTGACAAGTTTATTGTTTAATTCATAATAGTTAACCCCCCCCTGTTGGGGACACATGATGAAAACATCCTCATAGTAGAGGATATTTTCATTTACTCATCTAACAATGTTCAGTAGCCATGTAATACTTAAACATCTCATATCATTGTTAGAGTTTATATTAGTTTTCTTAATTCTTCTCTAATTGTGTCTTCATCACATACTTTATCTGATATTCTAATTTACTCCTTTACTCATACTGTAAAGGAGTATTTTTATTCCCTGTTTTTACTAAATTTTAAATAATTATTTGAAAACAAAACAAAATACTATATAATAAACTATTCGATAAAATATTCATCTTATTTAAACAATGAAAGTTACAATTATCGGATGGTGGATGAAAGGAAACAGTAGATATTATGTTATAATATAGTAAGCGTATACATTGTTGAGGAGGGCACCTAATGTATAAGAAACTAAAAATAGAACTGGCTACAG # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAATAGTTAACCCCTGTTGGGGGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-6.80,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 50276-50907 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAASHF010000011.1 Coprobacillus sp. K06 scaf_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 50276 36 100.0 30 .................................... TACTCCGACCATATCGCGCATAACCCTAGA 50342 36 100.0 30 .................................... TATCTGAATCTGAAGAATGATACATCTTGC 50408 36 100.0 30 .................................... TCAAAAGACTTCACAATTAAATAGCGTTGT 50474 36 100.0 30 .................................... ACCTTAAAGGCGAGCCGTCTGAATCAGTAT 50540 36 100.0 31 .................................... TAGAATGGAAATATGGGCTGTTTTAATACAA 50607 36 100.0 30 .................................... GAAATTAAAGAAAGTTTGGATTGCTGATAA 50673 36 100.0 30 .................................... AGTAAGAGACAAGATGAACGCCATGCTGTT 50739 36 100.0 31 .................................... CAGATGTTGAAAAAACATTGTTGATGCTTTC 50806 36 100.0 30 .................................... TAAGATTAATTTAAGAATTGAATACAGGGA 50872 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 10 36 100.0 30 GTTTTAGGGTTGTGTAATTTTGAACTGAATTAAAAC # Left flank : TATCAGATGAAGAAAAATGTATGAAATACCAAAAATTAGTTGATGATCTTAGTGCTATGTTGGAAGATGAACTAGATGATTACAATCTAGAATTTGACTATAAAAATGATTTAACTATTGAAAACTATTTAAAGGCAGTATCTTTAAAGATATCAAGAAAGGCAGAAGAAAAGCTTTATGATAGATTGATGAATTATGTAGAGCTAGTTACTGAACTAGTAAAGAAGCCAGTGCTAGTTCTATATAATTGTCTTGATTATTTAGATGATGAAGAATTAATGGAATTAACTAAGTATAAGAACTATAAGCATCTTCATATATTGTTTATAGAAAATAAAAGTAGGGAAATTGATTCTATTACTTTTAGAAAATATATAATAGATGAAGATTTATGCGAAGATTATGATAAAATAGAAGAGGTTCAAAGTGACTAGGGATTCGTTATCCTGAAAAGAATTCTAGCTTTAAATCAGAAAATACTATCTGATTTTTGAATTTGA # Right flank : CCAGATGTTGAAAAAACATTGTTGATGCTTTCGTTTTAGGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGGTTGTGTAATTTTGAACTGAATTAAAACATCAGAACAAGAAATTACGAAGATAGTCATGTTTTAGGGTTGTGTAATTTTGAACTGAATTAAAACTTCATAGCTGCATTAAATGCTTCTATCTTAGTTTTAGGGTTGTGTAATTTTGAACTGAATTAAAACACTTCATGAATTGGGTGTTCAGTATAAGCAGTTTTAGGGTTGTGTAATTTTGAACTGAATTAAAACTCCTAGAATATCAAGAATCGTACTGAATATGTTTTAGGGTTGTGTAATTTTGAACTGAATTAAAACGATTTCTCAGATTGCTAAAGATTACGGACTGTTTTAGGGTTGTGTAATTTTGAACTGAATTAAAACTT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGGGTTGTGTAATTTTGAACTGAATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA // Array 2 51105-52594 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAASHF010000011.1 Coprobacillus sp. K06 scaf_11, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 51105 36 100.0 30 .................................... TTCATAGCTGCATTAAATGCTTCTATCTTA 51171 36 100.0 30 .................................... ACTTCATGAATTGGGTGTTCAGTATAAGCA 51237 36 100.0 30 .................................... TCCTAGAATATCAAGAATCGTACTGAATAT 51303 36 100.0 30 .................................... GATTTCTCAGATTGCTAAAGATTACGGACT 51369 36 100.0 30 .................................... TTTTCAAGTTCTAGCTTTTCATTTGTTTGA 51435 36 100.0 30 .................................... TCTCTGCCATGTGCGTTTAATCGTTCGTCC 51501 36 100.0 30 .................................... ACAGCACTCAGCAGAAGATGCAGTTGAAGA 51567 36 100.0 30 .................................... TTGAACTATGACGCATTTTGTCTCAACAGT 51633 36 100.0 30 .................................... TACGCAAAACGTTTCTATGCGTCAAAAGCA 51699 36 100.0 31 .................................... TTGCGGGCTATTTTTCTAGTTTTATCGTAAA 51766 36 100.0 30 .................................... ACGATATCAAAGTTGGTGTATGGTTTGATA 51832 36 100.0 30 .................................... AAATGAAGGTTTCTATTACTCAGATTTCAA 51898 36 100.0 30 .................................... ACAGGAAGAATATGGAACAGTTCAGAAGTG 51964 36 100.0 30 .................................... GGAATCGGAAGAAGGTACAGCAACTTATGA 52030 36 100.0 30 .................................... CAGAATAGAGGATTTATATTTTGAGACTGC 52096 36 100.0 31 .................................... TGTTTCCACTTGACTATTACCCTTACAACGA 52163 36 100.0 30 .................................... CTGAAACGTTCATCAATCTCAAGGTCTCTT 52229 36 100.0 30 .................................... AGGCTATAAGTATATTGCAAGAGACTCTTG 52295 36 100.0 30 .................................... GCATTTCAAACAAGGTGCGCACAATGTCAG 52361 36 100.0 30 .................................... AGACAAGTATATGCCAGAAGAATGACTAGA 52427 36 100.0 30 .................................... TATATAAATTCTATTGCATTGTGTGAATAA 52493 36 100.0 30 .................................... GGTTCGTTGGAAAAGATGTGGCTGAAGTGT 52559 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 23 36 100.0 30 GTTTTAGGGTTGTGTAATTTTGAACTGAATTAAAAC # Left flank : AAGTTTTAGGGTTGTGTAATTTTGAACTGAATTAAAACGAAATTAAAGAAAGTTTGGATTGCTGATAAGTTTTAGGGTTGTGTAATTTTGAACTGAATTAAAACAGTAAGAGACAAGATGAACGCCATGCTGTTGTTTTAGGGTTGTGTAATTTTGAACTGAATTAAAACCAGATGTTGAAAAAACATTGTTGATGCTTTCGTTTTAGGGTTGTGTAATTTTGAACTGAATTAAAACTAAGATTAATTTAAGAATTGAATACAGGGAGTTTTAGGGTTGTGTAATTTTGAACTGAATTAAAACCAGATGTTGAAAAAACATTGTTGATGCTTTCGTTTTAGGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGGGTTGTGTAATTTTGAACTGAATTAAAACATCAGAACAAGAAATTACGAAGATAGTCAT # Right flank : CAAGAGGCGCGAATGCTATAATGTGGCCCCCGTGTCAAGGACATTAAATAAAAAAGTACTTAAAATCAATTAGAAATAAAGATATCCTCTAGGTGTAATATAACCAGGAGGATATTTTTATGTCTAAACTATGTAAATATGTAATTATTAAAGATGGAGTTTTATGTGTGTTGGAAACAAAGAAGATGAAGGAAGTCATAAGAAATGAACTTGATGTATTTGACTACCGTGATTATATATTTGATGATGATCCATCAGTCTATCTTCTTGTAAAGGATTTAAGTGTATATGNCTGACGGTTATTTTAATGGCACTGTTATATTCACTAAGATGGATGATTTTGGCTTTGCATCATTAAGCAATAATGATGTAGATATAATCAGAAGTCATCTACGCAGATTACCTGATGGACTGTTTGAAATGAGTTATTCTTTGAAGGATAGCTACTAATTTCTCGAGCGTTGAGTTTCTATCAAGATTATTTCTTACCTGTCTGAATT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGGGTTGTGTAATTTTGAACTGAATTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [70.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.27,0 Confidence: MEDIUM] # Array family : NA //