Array 1 291063-289368 **** Predicted by CRISPRDetect 2.4 *** >NZ_AIDX01000001.2 Streptococcus canis FSL Z3-227 contig1end, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 291062 32 100.0 34 ................................ AAATGATGCCTTAAAAAATCACGTTGATAGTGAT 290996 32 100.0 33 ................................ CTTGATGGCATCAACTGCATCTTGAACATTGTC 290931 32 100.0 35 ................................ AACAATATTAAAAGAATTGGTGTAGCTGGTTTCTC 290864 32 100.0 35 ................................ AACACGATAAAGAATATCTTAAAAAAATAAAAAAA 290797 32 100.0 36 ................................ AGCTTGGGAAGTGGGCAGGAACAAACCTCTAATGGA 290729 32 100.0 36 ................................ ATGGATTGATCAACAGAATCCTTAGTAAACTCTCCA 290661 32 100.0 33 ................................ TGCTTTACAAACCGTCCTATTATCAAGTCTGTT 290596 32 100.0 36 ................................ GCCTCTGGTCTGTCCAGTCAGCGTCAAAATAACAAG 290528 32 100.0 34 ................................ ATTTGTATAGTATTGAAAGACATTCCCTTCTTTG 290462 32 100.0 34 ................................ TTCCTCTATGGTGGCCAATTTTGCTGAAGCAATT 290396 32 100.0 34 ................................ CGTGAAAATAATTTTGAATTGCTTATACCAAAAG 290330 32 100.0 33 ................................ TTTCCATGCCTTGGCAAAATCCCCAGACGACAT 290265 32 100.0 34 ................................ GACTGTGTAGCCGAAAATTACCGCGTCCACTAAT 290199 32 100.0 34 ................................ GGCACCCATTTCAAGCGAGAAGACGGCCACAGCT 290133 32 100.0 35 ................................ ATTTTTTGCATAACACGAGAAAATGCAGAGCCCCC 290066 32 100.0 34 ................................ AACGTGCTTAAACACAGATTGGTTAATGCTGTTT 290000 32 100.0 36 ................................ CCGTCTGTCGTATGACTATCAATAATTTCTTTTAAC 289932 32 100.0 34 ................................ TGTCCATAAATGTCAATGTCAAATGCGCCGCCGT 289866 32 100.0 35 ................................ TATCACTAAAGATATCAATAAGTCGACCAATCTCA 289799 32 100.0 34 ................................ CTTTAATAAAGATAAAGCTGAAATCGATAGATTT 289733 32 100.0 34 ................................ TTGCTATTTTGATAGTACTATAATAACATGTAAA 289667 32 100.0 34 ................................ TCTTACAACTACTACGACCACGCAGCTTCCGCTG 289601 32 96.9 35 ......T......................... TTTTTGTTTTGATTACATTCTCGGTATGTCTATCC 289534 32 96.9 36 ......T......................... TGCGTATTTTACCGTGCTTTTTTGCCTTCTGTCGGG 289466 32 100.0 35 ................................ ATCAGTTGTTGTGCTACCTTTTGGTGCAGAAGCCT 289399 32 75.0 0 ......T..G...........AC...A..CTC | ========== ====== ====== ====== ================================ ==================================== ================== 26 32 98.8 35 GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Left flank : AAGGCCATACGAGGAGATTTAGAAAGCTATCCACCTTTTATGGTTTAGGAGATGTTATATGATGGTTTTAGTTACTTATGATGTAAATACTGAGACATCGGCTGGTAGGAAAAGATTACGTCATGTTGCCAAACTCTGTGTGGACTATGGGCAACGTGTTCAAAATTCTGTTTTTGAATGTTCTGTGACACCCGCAGAATTTGTGGATATAAAACACCGCTTAACACAGATTATTGATGGGGAAACTGATAGTATTCGCTTTTATTTATTGGGTAAGAATTGGCAGAGGCGTGTGGAAACACTTGGTCGCTCAGACAGCTATGACCCAGATAAAGGTGTCTTATTATTGTAAAAACGTTTAGTGCGACTCGAGGTTTCACAGAAAAACCTAGCTTGCTCGCGCAAAAATAACTTAAAAAAGAATCGAAATGGAGATAAAAAGGTTTAAAATGCCTCTGTATTCTCCAGCCGTTTCTCTATAAACTGTGTCATTTGGCGCA # Right flank : CTATGTTTTTGGCAGTTCTGTTTTGTGATTTTCTCTGTTCACAAGTTTCCAACTGTTTTGTCTCTACTTTTTCTGTCCTATATGCTATAATATGCCTAAATAACTATGGTAAAGGAGTTAGGATGACTAAGGTTCGGTATGGGATTGTGTCGACAGCGCAGGTGGCCCCTCGTTTTATTGAGGGTGTACGCTTTTCGGGCAATGGCGAGGTTGTGGCGGTGTCTAGTCGGTCACTTGATAAGGCAAAGGCTTTTGCGGCAGCGCATCAGTTACCTAAGGCTTATGGTAGTCTTGATGACATGTTGCTGGATACGTCGATTGATGCTATTTATGTGGCAAGTATCAATCAGGATCATTTTCCTACAGCTAGGAAGGCTTTGCTGGCAGACAAGCATGTTCTCGTGGAAAAACCGTTTACCTTGACAACCGCTCAGGCTGAAGAGCTCTTTGCCTTAGCGCAGGAGCGTGGCTTATTTTTGATGGAAGCTCAGAAGGCTGTC # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCACCCTTCATGGGTGAGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.70,-5.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 2 1973567-1973933 **** Predicted by CRISPRDetect 2.4 *** >NZ_AIDX01000001.2 Streptococcus canis FSL Z3-227 contig1end, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1973567 36 100.0 30 .................................... GATAGCAGTACCGCTGACAACATTGTTGGC 1973633 36 100.0 30 .................................... TCAAAAATTTTGATGTAATCATCGACAAGC 1973699 36 100.0 31 .................................... CCAAGCCAATTTATTTTCCGTATTAACCAAC 1973766 36 100.0 30 .................................... GTATCCATCTTTTTTAATGGATATATATAA 1973832 36 100.0 30 .................................... TAGAAGAAAGAAAGATGTCAATGAGTGAAT 1973898 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 6 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : CACAGCCTGACGACGTCCACAGCGAGCCTTGTTCGCCTTATAGTAATGATAGCACTCAGTTGGCTGAATGCCCTTGTTTGAGGAAAGTCACTACCTTATGAATGGTTTGACGGCTTCGCTTAAGTGATTGCGCAATTTCGAGGACAGAAGTATCTTTCTCAACAGATGCCTCTATCATTACGAGCTCATTTGTGGTAAGATGGGCATGGGTCATTTATGTTACTTCCTTTCAGACAAATGTGGTGTTTATCTGAGCCTAACATAGATGGCTTTTTCTGTCTAATTTAATTTTACAAATTGGGCACATAAAAAATTGTAAGGCGACAGAACAAAGGAGAAAAGAAGGTTTCATGCGTTTGTCGTGCTGGGATAAGAAGGGAAGTTGATTCTATAGGTTTTTTGGCGTATAATGGAGCTATGAAAAGGACTGTTTAAGACTAAAGTCTAGCTAAGACAAATAGTGCGATTACGAAAAATTGTGGACGAAAATAGTCTACGAG # Right flank : CTTGACAATCAATGAATAGGTTACACTAAACTAGACAGTCTTATAAAGTGTTCTACACTAAAGAAAATAGGAGAATATTATGTCTAGAAAAATACGTCGCCACTTCGCCGACGACTTTAAGCAACAAATCGTTGACCTTCACAATGCAGGGATGAAACGAAGTGAGCTTATCAAAGAATATGAGTTAACCCCATCAACCTTCGATAAGTGGGTACGTCAGGCAAAAACAACTGGTTCCTTTAAAACTATTGATAATCTTACAGATGAGCAGCGTGAGCTGATGGAACTCCGAAAGCGTAATAAAGAACTCGAAATGCAGCTAGATATCCTAAAGCAAGCGGCGGTGATTATGGCACGAAAAGAGAAGTAATCACTGCTAACAAAGACAAATATAGTATTTCAGCCATGTGTCGGTGGTTGGGTATTCCTCGTTCTAGCTATTACTACAAAGCTGTGGAATCCGTATCTGATACCGAGCTTGAAGAAAAAATCAAAGCTAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 3 1975186-1975420 **** Predicted by CRISPRDetect 2.4 *** >NZ_AIDX01000001.2 Streptococcus canis FSL Z3-227 contig1end, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1975186 36 100.0 30 .................................... TCAATATTTTTTTCAATGGTAAGATCATTC 1975252 36 100.0 30 .................................... CGAGCGGGGCCACCGACCTGAAGGCTATCC 1975318 36 100.0 31 .................................... TCACACTCAAAGTTTACGCTCATCAGATAGA 1975385 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 4 36 100.0 31 GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : GTCGGTAATGGTTGGGCTTATGTTTGCTTGATTATTGACCTCTTCAATCGTGAAATCATCGGTCTGTCAGTTGGTTGGCACAAGACCCCCGAATTGGTCAAACAAGCGATTCAGAGCATCCCTTACGCTCTGACCAAAGTCAAGATATTCCAGTCAGATCGTGGGAAGGAGTTTGATAATACTTTGATTGATGACATGTTGGAGGCCTTCGGAATCACCCGCTCTCTTAGTCAAGCAGGTTGTCCTTACGACAATGCCGTTGCTGAAAGTACCTATCGTGCTTTCAAAATGGAATTTGTCCACCAGGAAACTTTCCAGACGCTAGAAGAATTGGCCCTCAAAACTAAGGACTATGTCCACTGGTGGAATCACCACCGCATTCACAGCTGCCTCAACTACCAAACACCGATGACCAAACGTTTAGTCGTTTAGAAAAAGCACTTTATAAAATCTGTACAGAAAAGTGTTGCCTTTTCACAATTTACCTTTGTACTTCCGAA # Right flank : CAGATAATACCGCTTGTTGTTGATCTTCGCTTCTTTCTATTAAAATGTTTTCATGTTATAATAGTCAAAAGGAGAAAGAGAGTGGAGCGATGGAACAAACATTTTTTATGATTAAGCCTGATGGGGTGAAACGAGGGTTAGTTGGGGAGATTTTGCGACGTATTGAGCGGCGAGGGTTTACATTTGAACGCTTGGAGTTGCGGCAAGCTAGCTCGGAACTCTTGGTTAAGCATTATGAGGCCTTGGTTGCGAAGCCATTTTATCCTGAGTTGGAAGCTTACATGACCAGTGGCCCTGTTTTAATTGGGGTACTTTCTGGGAATCGGGTGGTTTCGTCTTGGCGAACCATGATGGGGGTAACTAATCCCAAAGATGCTCTTCCTGGCACTATTCGAGGTGATTTTGCTCAGGCTCCTGGTGATGATGGTGGCATTTTTAACGTGGTTCATGGGTCTGATTCTCTAGATTCTGCTAAGCGTGAGATTGCCCTTTGGTTTAAC # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //