Array 1 197554-195425 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEUYP010000050.1 Xanthomonas fragariae strain Xf100 Scaffold3_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 197553 28 100.0 32 ............................ AGACGGTACAACTGCATACGCTAGAGGTATAG 197493 28 100.0 33 ............................ GTCATCGTGACAACCGAATACCGTGGTGTCTTC 197432 28 100.0 32 ............................ TTACGGTCATGTCCTGGATATGGTGTCCAGGA 197372 28 100.0 32 ............................ TTTCAGATCCCTCGCCTGGGTGGCCTACTCGT 197312 28 100.0 32 ............................ GTCCATGCGGCCGGCAGCCAACAGGCTGCGAA 197252 28 100.0 32 ............................ TATGTCGCTGAGGGGTGATCCATACCTAACCC 197192 28 100.0 32 ............................ CTGGCTGCAACCGCTACTCCGTAATAACTAGG 197132 28 100.0 32 ............................ ACCAGGTCCCGGCCCTTCTGGGAGTTCACTGC 197072 28 100.0 32 ............................ AATGAGCAATAACTTTTGCGCTAGTGTTCATC 197012 28 100.0 32 ............................ ACATTATCTTTTCCGCGAATCAAAAGCTTAAT 196952 28 100.0 32 ............................ TTCCGGGGCAATCCCTTTACGCCTTCTTGGCC 196892 28 100.0 32 ............................ ACCAAACGAACTGGTCCAGGCTAGGATCCGTT 196832 28 100.0 32 ............................ TTCTGGGACCACACAACCTCGCCTGCGTGCAC 196772 28 100.0 32 ............................ GTTCAGGGCAGGCGAAAGGTCTCAGCGCTGCA 196712 28 100.0 32 ............................ GCATCGACCCAATGGCCGCCCTTGCCAGGCTC 196652 28 100.0 32 ............................ TGCAGATGCGCGCGACGAATATCGGACGTGTC 196592 28 100.0 32 ............................ AAACATGCGGGGATCAGCACGGCCATCGGTTC 196532 28 100.0 32 ............................ CGTAGCCGGGAACTCAGCCAACTGTGCTTGCA 196472 28 100.0 32 ............................ GATTTCACTGATTGATCTGGACACTGTGCAGC 196412 28 100.0 32 ............................ TCGAAGTAGGCATAAAGCACGTTGGGCAGCCG 196352 28 100.0 32 ............................ CAGACAAGCCAGACGCCGACCCACTGATAGTC 196292 28 100.0 32 ............................ CGTCGTTTCGCGTCGTCCACCGCAGCCAAGGT 196232 28 100.0 32 ............................ ACCAACGACGGGTGTCGCGCGCACCTGGGTAG 196172 28 100.0 32 ............................ ACCTACGAGCCCCAGCCGTATGCAGAGGTTTC 196112 28 100.0 32 ............................ CATTAGGCTGCACAGTGTCCAGATCAATCAGT 196052 28 100.0 32 ............................ AGCCGCACCCTTGCAGACTGTACTCTCTGCAT 195992 28 100.0 32 ............................ TCCACGTCCTCTTGAACAACATGTTCAGGGAG 195932 28 100.0 32 ............................ TGCAGCAGGGGGAGGAACTTCCGTATCAAGAC 195872 28 100.0 32 ............................ TGTAGGAGCAGACGGGGACAATACGCAAGCAG 195812 28 100.0 32 ............................ TTTGCGCCACACCGAAACCGAATTCCGCGACA 195752 28 100.0 32 ............................ TAAGCAGCGCGTTAAGAATACATTCGTGACCT 195692 28 100.0 32 ............................ TAGATGCCCTGATTGCAGAAGTCAGGACCTCT 195632 28 100.0 32 ............................ TCTATGGGGAAATCATTTTCGAAAAGTACATC 195572 28 100.0 32 ............................ TCCCAGGGCAGTCGGTGTCGCACCTTGCTTCG 195512 28 100.0 32 ............................ TTAAACCAAAACTCATGCCAGTCGTAGCGACT 195452 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 36 28 100.0 32 GTTCACTGCCGCGTAGGCAGCTCAGAAA # Left flank : TTGCAGATGTTGATGGCGAGACCCTGGCTGCACGGGATGCTCGATCACCTGGCGGTATCGGCCATTCTCGCTGCCCCTGCCGACACCCAACATCGGCACGTCACCAGGGTGCAGGCCAAGAGCAGTCCCTCGCGCCTGCGCCGTCGTGCCATGCGCCGTCATGGGATCGATGCAGAGACAGCCGCCCAACGCATCCCGGATGCGGCAGCCGAACAGCTGCCACTGCCGTTCGTCGTACTGGGCAGCCGCAGCACGGGACAGGCGTCATTCCCGCTGTTCATCCGTCACGGCCCCCTGCTATCGGAGCCGACGAACGGCAGCTTCAACAGCTATGGCCTGAGCCAGGAAGCGACCGTGCCCTGGTTTTGACCCTTTTTCCCGGACAGAACAAAGGCTGCTTTAGAATCAACCACTTGGCAGGCACCTTGTTTCAAAGGGTGCCTGCCCTGTTTTGTCGGTATTTCTTTTATTTATCAATGGATTGATGAAGATCTGATCTT # Right flank : AATTCAAGGATGGCCATACGGGTTGGATTGACGTTTGATACGCCCAGGGTTCCGTAGACCCTCAAGACCCTCGTTGCGCGTAGCGCCGTTCAAACTCTACAGGGGACAGGTCGCCAGTTGAACCGTGGCGGCGGTTGGGGTTGTAGAACATCTCGATGTAGTCGAATACCTCGGCGCGAGCGGCGTCCTTGGTGGAATAGGTCCGCCGCCTGATCCGCTCGCGTTTGAGCAGGCCGAAGAAGCTCTCCACGGGTGCGTTGTCGTGGCAGTTGCCACGCCGACTCATGCTGCACACCACGCCATGGGACGCCAGGAAACTGCGCCAGTCATCGCTGGTGTAGACAGACCCTTGGTCCGAATGAACCAAGCAACCAGCGTTGGGTTTGCGCCGCCACACCGCAGACAACAAGGCCTGCACGACCAACTCGGTGTCGGCCCGATCGCGCATCGCCCAGCCGACGACCTGCCGGGAAAACAGATCGATCACAACAGCCAGGTAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCGTAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCGTAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //