Array 1 456237-456866 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGMR01000001.1 Enterococcus sp. 5B7_DIV0075 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 456237 36 97.2 30 ....................C............... AAAAGGATTGAATCATTTGAAAAGCTTAGT 456303 36 100.0 30 .................................... CAAAAACAAAATTGAAAAATATTTTGAGTA 456369 36 100.0 30 .................................... GTAAAGCCATGAAGGCATTGTCATGGTACT 456435 36 97.2 30 ........................C........... TGTTTTTGTCATTTTGTTCCAGTCGAAACT 456501 36 100.0 30 .................................... AGAATTAGATAATGTAGAAAGTATTTGTTA 456567 36 100.0 30 .................................... TGTGTCGTTGATAACATTTTCTTGAATGTG 456633 36 100.0 30 .................................... CCATGCAAACACTATGAAAACTCAAACTGT 456699 36 100.0 30 .................................... TAAAGTTTGTTTTCAACAATGGGGTTACAA 456765 36 100.0 30 .................................... TGCAGATAAATTTTTTACAGCTACTTTGGA 456831 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 10 36 99.4 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : CAGAAATCAAAACCAAAATTGATCGTTTGTCGATGGAAATTGCCAAAGTGATGCAACACGAATTGTTAGAACATGCGCTAGATCTTGAAGAAGATGAGTTGACCCTCATGGAGATATTTAAGTGCTTAGGAATACGGATTGAAACGAAAAGTGATACCATTTTAGAAAAAATGATTGAAGTAATCCAAGTATATCGTTATCTAGTGAAAAAGAAGCTATTGGTATTCGTGAATGCTTGTTCTTATTTAACCACGACAGAATTACAAACATTAATTGACCATATTTCTTTATACAATGTAGATGTATTATTTTTAGAACCTCGACCAATTGAGGGTGTTGCACAACAAATTCTAGACCAAGATTATTTTTTGACAAGAAGATAACAGATAGGACTAATTTTTTCGTTCTTTGACAAGTAAATCAAACCAATGAAGCATTCAGGCTAAAGCCTTGCTATGGGCGAATAGTGCGATTACGGAACCTCAAAAATTTGAGCCGAG # Right flank : CGACTATTTTGAAAGTAGTTCATAATCCACTGTTTTAGAGCTATGCTGTTTGACGGACAAACTCATCTGTTTCTGAAAGCAAGCAGTATACATTCATACGATCAAATAAAAAAAGATGTAACAAATGGAAAAATAACAATGATTGAAGATGCAAAAAATTTTGAAGGAAATCCAGTGGTGAGGGTTATAGCACAAACAAGTAAAGAAGATGTCGGAAAGAGTGACACGCTAGGACGAAGCGATTTCCAGTTCCTAGGTGCTAATACTGAATGATTTACACCGCTACTTAGCAAATAGATAGGCAAAAAAAGTGTAAAGGAAGTATTTATGAAAAAGGTTGTTGTTACACTCATAATAATAACTATCCTTGTCGTAGGGTTTCTTTTCGTAGGCGCTAAACGTACAGAAAATCTACTACAAAATAAGGTTGAAAGTACCACTACAAGTGATGAAGAGGCAAATGACAGTTCAATCCAGTTCAAAATTATTGATTCAAATAA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.68 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 2 1490929-1491098 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGMR01000001.1 Enterococcus sp. 5B7_DIV0075 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 1490929 36 100.0 32 .................................... ACTTTGATGGATTTAGCCAGAAACACGCTTGA 1490997 36 100.0 30 .................................... AGGTGTTGTATTAGATAATTGTATGGGTAG 1491063 36 91.7 0 ............C............A.......C.. | ========== ====== ====== ====== ==================================== ================================ ================== 3 36 97.2 32 GTTTTAGAGCTATGTTGTTTAGAATGCTTCCAAAAC # Left flank : TGCAAATCCTTACTTGGCAATGGCCGTATTATTGCAAGCTGGTTTAGATGGTATCCGTCGTGAATTAACACCGCCAGATGCGGTTGACCGTAATATTTATGTGATGAATGAAGAAGAACGTGAAGCAGCGCAAATTCAAGATTTACCTTCAACGATTCACAACGCAATTAAAGAATTGCGTAAAGATGAAGTGATGATCGATGCACTAGGTCAACACATCTTCTCAAACTTTGTTGAAGCGAAACGTTTGGAATGGGCAGCTTTCCGTCAAACAGTTTCTGAGTGGGAAAGAGAACAATATTTAGAACTTTATTAAGTCAAAAAAGTAGTAAACACAGAGGCAATCTTTTGTCTCTGTGTTTTTTTCATCCATTATGTTTTGTTTCCCACAGGTTTATTTTCCCATGATATAATAAGAAAAAACAATTGTTGAAGTACTCTAACTGAAGTTTTGCTATGGACGAGTAGTGCGATTACGAAACCTTGAATTTTTTTGCGAG # Right flank : CCAACAAATTTTTTTGAAATCGCAATCATCAAATTGATGTCTTGACTTTCAATTCTGGAGCTTGTATTATACTCCTTGGGCACCCTTTTAAAGGGTCAGAAGTTTACAGAAATTTCAGCTCCCTATTCTTGTTAGAAGAATAGGGAGCTTTCTTTATTTTTTCTGGGACTTTTCCTGCAGATAAAACAAGAAGGAGTTTTTGAATTTATGACAAAATACATTTTTGTAACTGGCGGCGTTGTATCTTCGATTGGTAAAGGGATCGTAGCAGCTTCATTGGGTCGCTTGTTGAAAAATCGTGGCCTAAAGGTAACTATCCAAAAATTTGATCCGTATATCAATGTTGACCCAGGAACAATGAGTCCTTATCAACATGGAGAAGTATTTGTAACAGATGATGGTGCGGAAACAGACTTAGACTTAGGACACTATGAACGTTTTATCGACATCAATTTGAACAAATACTCCAATGTTACCACAGGAAAAATCTATTCTGAAGT # Questionable array : NO Score: 5.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTAGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 98% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 3 2214785-2215084 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGMR01000001.1 Enterococcus sp. 5B7_DIV0075 scaffold00001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2214785 36 100.0 30 .................................... GAGATATTGTAGAGACGGATGCGAGTGTAG 2214851 36 100.0 30 .................................... TGCTTAAGATGTAATGATGAAACCGTCATT 2214917 36 100.0 30 .................................... TGTCGTGTTTTGGATTATGACTTTGCTGCT 2214983 35 91.7 30 .............-TA.................... TAATAGATTTGCTGAACAAGCTACTCAAAT 2215048 36 88.9 0 ............................GG.T...T | A [2215074] ========== ====== ====== ====== ==================================== ============================== ================== 5 36 96.1 30 GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Left flank : GAAGAACGATTTATGGATGAAGATGGACAAGTAATTGATGAGTATCGGATTGAATTTATTCGAGACCACTTAGCTTATCTTTGGAAAGCAATTGATGACGGCTGTAACATCAAAGGATATCATTTATGGACATTTATTGATTGTTGGTCATGGATCAATTCGTACAAAAATCGTTACGGACTAGTTTCCTTAGATCTACCTACTCAAAAAAGAACAATCAAAAAAAGTGGCGAATTTTATAAAAAACTAAGTGACGAAAATGGATTTAATTACGATATTGATTTGTTAGTTCTTTAAACAATTATATCCCTGTAGCTCAGACTCATTCAGCAACCAAAAACTGGTTATGACAGAAAGTCAGTTTATGCTATACTAAAGAAAACTGTTCGTTGACATTCAAATAGCCAACATATTACCAAATAAATAGAAAGAAGCATTCAAACTGAAGCCTTGCTATGGGCGAATAGTGCGATTACGGAGCCTCAAAAAATTTATCCGAG # Right flank : TGTATGATAAAAAAGGACCGCCCATTGAGAGCTGGTCCTTTTTTTGTTAAATTTTTTGATCAATTTCAGTGACAGTTATTTGTAGCACACGGCTTAAGAACGGAAACTTTTCCTTCATTTCATTAAAAATTGGTCCCCCTGTGATAAACTCAGCGGTTCCGTGCAAATGGAATCCTGCACCAGGTCCTACTGTACCAATGACTTCTTTGCTTCCAACGGTTAACATCACTTGATTATTTTTTTCGATATCTTGTTGAACACTGTGCATCCCAGCTGCAGGAATATATAATTTATCGCCACTGATTTGAACATAGCTATTCCAAGTGTTCACAGCATGAAAGCCCGGAGCATTTTCACTCGAAGAAATTATTGTTACTGCTCCCTCATGTCTCATTACCTCTAAAAATGTTTCATTCATCATTTTGCAGACCTCATTTCAATTATCGTAAGTTTATTATAGCACCACTAAGTATTTCGTTCACTTTCTAGTAATAAAAAAA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.80,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 4 2247391-2247223 **** Predicted by CRISPRDetect 2.4 *** >NZ_NGMR01000001.1 Enterococcus sp. 5B7_DIV0075 scaffold00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2247390 36 100.0 30 .................................... TAAAAACTTGAGTTTTACAGCGATCTATAT 2247324 36 100.0 30 .................................... GTATTCTTTCCAAATCGCCAATGACCTTTT 2247258 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 3 36 100.0 30 GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Left flank : TATATTTTTTCTTGTTGTGCGTATGACTAAAGCCAATAACACTGACAAAAAAGAAAATTGTTGCGACAGGTCTACCAAACCAGTCTAGCCAGTTAGGTGCGCCAAATGGAACAAACATCTGATGGATATGATCAATAAACATTAAGACAATGCCTAACATTTTTAAATCAAATGTTGATAGGCCTTTTTTGGGTGTATCAATCGTCAAAAATAATTCCTCCTAACTAATAATAACTATATGTTAACAATATGATTGATTGAAAGGCTAGTGAAGTAATATAGAACGAGCGAACAATTTTGTCACAAGAGATTTTTTTGTTATCGATCATATACTGGTCTTTATGAGGAAAGAGTTGGGTAGTTGGGCTAGTGAATTCATGGTATACTAATAAAAAAGATCCTTGAAATCTAAATAAATAGATACCAATAGAAGCATCCAAACTGAAGCCTTGCTATGGGCAAATAGTGCGAGTACGGAACCTCAAAAATTTTGAGCCGAG # Right flank : AATAGAAAAGAAGGTTTTTCAATGCTCTACCTGTGTATATTTAGGGTATACTCAAAATATACGATAATGTTCTATTTATTGATAATTATCTTCCTTAATTTTGAAATGGCAGAAATCGATATCAATGAGAGGATAGATTTTTTCTTAATCCTAAAAAAATTGAACAACAATTTCCGGAGTTTTTTAAAATCTCTGAGTTGTACTATTTGAAGGGAAAAATATGTTGGATACTAGAGAGTATGAGCTAAAGCTGCAGCAGCCGTAGATTTTCCTTGTAAAAAGGTTATTAAAGGTTTAAAAAGAACGCTTGAAAGAAATTGGAATACCAGTTCCAGAAATATATCAAGATAAAATAAAAAAGATGTAGCCGAGCAAATGCTTTGAAGAGGGTATAAATCCTGAAGATTATTAGGCTATAAGATTATATAGTTAAATATTAAATGTTATTTTTTGTGAGTGTACATACTTAATAAACCTTGTTTTTTAGCGTGTTTAGGTAT # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGCTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.10,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //