Array 1 142653-139501 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHDS01000021.1 Acinetobacter baumannii strain MRSN959 MRSN959_contig00021, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 142652 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 142592 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 142532 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 142472 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 142412 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 142352 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 142292 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 142232 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 142172 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 142112 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 142052 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 141992 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 141932 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 141872 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 141812 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 141752 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 141692 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 141632 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 141572 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 141512 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 141452 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 141392 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 141332 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 141272 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 141212 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 141152 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 141092 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 141032 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 140972 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 140912 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 140852 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 140792 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 140732 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 140672 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 140612 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 140552 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 140491 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 140431 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 140371 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 140311 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 140251 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 140191 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 140131 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 140071 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 140010 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 139950 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 139890 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 139830 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 139770 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 139710 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 139650 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 139590 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 139530 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 53 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.35 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.31, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //