Array 1 126093-126360 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWNV010000004.1 Acinetobacter bereziniae strain ACIN00227 ACIN00227_c0004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 126093 28 100.0 32 ............................ TTCTACCCAAACCCGAGCAATCCTTAGAACAA 126153 28 100.0 32 ............................ ATTGATCATATGTTATTTTCATTTCACACCTA 126213 28 96.4 32 ...T........................ TAGTACCTTCAAGCATAATGAATCGCTCATTC 126273 28 96.4 32 ...T........................ AAACGGAACAATCTTTATTTATGATGAAGCGC 126333 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 5 28 98.6 32 GTTCACTACCGTATAGGTAGCTTAGAAA # Left flank : ATGTAATAAGGGATTTAAGCGAAATCAGTAGCTTAAAGCCCTTTTTTTATGCGTATAATAATATGTGATAATATCAGCCTACTAGGTTTAAATGGTGAAATTAGCCGATCTAGCCGAATAATTTACGTCAAGATTACGTCAAGCTTTTGAGTTTAAGATAATGAAAATACCAAAACCGATTAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAATGAAATGTAAGATTTCTTCATTTTCTAATGATAAATTAAATGAGTGGCATTAAAAACATGTGTGAATATTGGAAAATCTTTTAGTGATAAGATAAAAGTAGCTGATTTAGAGTATATAGGCTTAATTAATCAAACAAATATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTAAAATTATA # Right flank : AGAGATTTCTTCATTCGTAATTTGAATTGTTCAAAATTTGATTTATATTCATTTCTGTTTTATTATTTGCTTGGAGACGCCGAGTAGCGGTAACTACCCGACGCATTCTGTTAGTGAGCTGATTGAGAAATCAACAACAATAACAGGATGACAACGATGATTAGGTAAAAGCGCATCGTAAACCTCCAAGGATTAATGTAACGAAACACCGTTACAGGTCACCCTATCCCCAATGACTAGGGCAGGTTACTGTAACACAACAAAAAGCGCCCATGGGCGCTTTTTGTTGTTTAAAGAGATGAGGTTAACTACATCCTATCCAGCGTTTGTCTTCTTCAATTACCATATTCACTTTTTTCACTTTCAATTCAGCACGATCGTTTATTTTATCTGTTTTGTACACTGAGAGACGTCAAGAGAATACCTTTCGTATAATCTGATCATTCTCTAACAAGCATTCACTACCGTATAGGTAGCTTAGAAACCTTACCAAAGCGATA # Questionable array : NO Score: 5.99 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGTATAGGTAGCTTAGAAA # Alternate repeat : GTTTACTACCGTATAGGTAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: F [matched GTTCACTACCGTATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [86.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 126816-127023 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWNV010000004.1 Acinetobacter bereziniae strain ACIN00227 ACIN00227_c0004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 126816 28 92.9 32 A..........T................ CCTTACCAAAGCGATATAAGCCATCGCACCGA 126876 28 100.0 32 ............................ AATACAACTCGGTTTTGACTTGATCACGACTA 126936 28 100.0 32 ............................ TTGCTAACGTTTTGAATTGCCGAAAAGTCTGA 126996 28 78.6 0 ...........T...AA.CC....A... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 92.9 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TATTTATGATGAAGCGCGTTCACTACCGTATAGGTAGCTTAGAAAGAGATTTCTTCATTCGTAATTTGAATTGTTCAAAATTTGATTTATATTCATTTCTGTTTTATTATTTGCTTGGAGACGCCGAGTAGCGGTAACTACCCGACGCATTCTGTTAGTGAGCTGATTGAGAAATCAACAACAATAACAGGATGACAACGATGATTAGGTAAAAGCGCATCGTAAACCTCCAAGGATTAATGTAACGAAACACCGTTACAGGTCACCCTATCCCCAATGACTAGGGCAGGTTACTGTAACACAACAAAAAGCGCCCATGGGCGCTTTTTGTTGTTTAAAGAGATGAGGTTAACTACATCCTATCCAGCGTTTGTCTTCTTCAATTACCATATTCACTTTTTTCACTTTCAATTCAGCACGATCGTTTATTTTATCTGTTTTGTACACTGAGAGACGTCAAGAGAATACCTTTCGTATAATCTGATCATTCTCTAACAAGC # Right flank : ATATAAACGCCTTAACATCTTAGCTAAATTTAGGAAAGTACAAACGATATGGAATAATTTTTATAGTAAATAAAACACGTAAAACACGATAATTTAAATGATAATTATTTGCACTATTAATTGCATTTGAGTATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTGAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTCGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGTAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTAGCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGA # Questionable array : NO Score: 5.51 # Score Detail : 1:0, 2:3, 3:0, 4:0.65, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.26%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.70,-2.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 79093-81220 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADWNV010000007.1 Acinetobacter bereziniae strain ACIN00227 ACIN00227_c0007, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 79093 28 100.0 32 ............................ AGTAGTTGAATTGGTTGCTTTGGATTTTACAG 79153 28 100.0 32 ............................ TTTTGTCACTAATATTAAATCAAGATATTCAT 79213 28 100.0 32 ............................ ACTAAATGTAAACCCGGTTTTGGGCTGAACGG 79273 28 100.0 32 ............................ AATGACTGCAACACCTACCAAACCTGTTGTTA 79333 28 100.0 32 ............................ AGCACGATCAGCAAGGCTTAGCAGAACAACAC 79393 28 100.0 32 ............................ ACTTTCTAGTTCAAAAATCTCACTATCGAGAG 79453 28 100.0 32 ............................ ACCTGAAGGCACAAGTGGATCGAGTAAGTATG 79513 28 100.0 32 ............................ CGGTATAGGTTCAAATCCTTCTTCATTGATAC 79573 28 100.0 32 ............................ TTATATACCTTGATTAGTGCGTTTGCCATCAA 79633 28 100.0 32 ............................ ATGACCCAACCAACACCTTCAACCAGCGATTG 79693 28 100.0 32 ............................ AACAACGTCAGGCTTATATGAATTTTCAACAT 79753 28 100.0 32 ............................ GACACCAAATAACACTGGTTCAACCCAAATGA 79813 28 100.0 32 ............................ ATATAAAAAACTAAAAACACCGATCAAAAAAC 79873 28 100.0 32 ............................ GAGTATTTATCTCAAATAATGAAATCAAAAGA 79933 28 100.0 32 ............................ AGAACAAGTGGAACAACAAATTAAAGAAGCTG 79993 28 100.0 32 ............................ TTATGGCTTTGTACGCCGAATGAAGTTTAGCC 80053 28 100.0 32 ............................ AAGACATTTGGACAATTACAAACTAATTTCTA 80113 28 100.0 32 ............................ TTGGTCAGATACGATCTTCGCCACAGTTTCAA 80173 28 100.0 32 ............................ TACTGGGCAAGATGAATCTTTAACAGGGTCTC 80233 28 100.0 32 ............................ GTATAGCTTGATAAATGCAAGGGCATCGGCAG 80293 28 100.0 32 ............................ GTTCGGATTTGGTTTTGAAGGGTCAGGGTCTG 80353 28 100.0 32 ............................ TTGTACCGCTCCCAGTAGATTGGAATAATTTA 80413 28 100.0 32 ............................ ATATTCACATCATTATTTCCCTTATGTACCAT 80473 28 100.0 32 ............................ GCTAACATCGCGTCCTGAGTATTCATATTTAC 80533 28 100.0 32 ............................ TTGCTGATCGTTTCAGGTCTAGAATTATCTGC 80593 28 100.0 32 ............................ TATGATCGGAGTACCTAGCATTGCCATTTGTT 80653 28 100.0 32 ............................ ACAGTTGAACAGAAACTTCACGCGCTCTAGTT 80713 28 96.4 32 ......A..................... TAAAATTAGTATGTACAAGACTTGGAAATTGT 80773 28 100.0 32 ............................ TGAAAAAATTCAAACGGTTAAGAAACAGGCTC 80833 28 96.4 32 ...........T................ TGTACCAAAAGCATTGGAACTTTTAACATTCT 80893 28 96.4 32 ...........T................ TTCTTGGTCGTGTACACGTAGCATTGCCCATA 80953 28 96.4 32 ...........T................ TCCTACGCTTTCCACGTCTGCAATGGCTTTGC 81013 28 100.0 32 ............................ ATTACCTAAACGTATTTCCCCGAACTCACCTT 81073 28 100.0 32 ............................ AAGGTATGAAAGCATTCTGGGTCGCATTTGGA 81133 28 100.0 32 ............................ CGACCATAGACGAAGTTGCCTTTGATTGGGGG 81193 28 96.4 0 .....................C...... | ========== ====== ====== ====== ============================ ================================ ================== 36 28 99.5 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TTCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACAAGTTTTATTGAACTTTAACATCATATAAAAATAATCTTTTTTAGCAGTTTATTGGGTTGCAAAGGAAGTATGTATTATCGTTTGCAAGATAAATTAAATTTTAAATATTTGATTGATAGATAAATTATTTTATATGAGGTATGTCGTATGATTCTAAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGGGAACAATTTTGGGAAATATGCTTTTAATAGAATTACGATTATTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTGATCTAAAATTATA # Right flank : AAATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTTGTATAAATTGTTTATTTTATAGCAATAAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGCTTTTTATTTAAACAAAAAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAACTACCTTTCTATCCTGC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //