Array 1 6373-9234 **** Predicted by CRISPRDetect 2.4 *** >NZ_BCWT01000089.1 Sphingomonas adhaesiva NBRC 15099, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 6373 32 100.0 33 ................................ ACGTCGGTACGCGGGACGATCTCGCTGGAGGGC 6438 32 100.0 34 ................................ CAGCACGGTCAAGCCGCCGCATCATGCGGTGCTG 6504 32 100.0 33 ................................ GTGTACCGGCCAGGACGACCGGCGCTGCTGGTG 6569 32 100.0 36 ................................ CCCGACGTTCGTCAGGCGCTCGCATCGCGCCGGGCC 6637 32 100.0 33 ................................ GCGTGATCGACTATTACGAGGCGGTAGGCCAGG 6702 32 100.0 33 ................................ ATCTCGGCGATCGGCTCCGACAAGGCGTCGGCG 6767 32 100.0 34 ................................ AGCTGGCGCGGTCCACGATCGCGCGCCAGCTGCT 6833 32 100.0 33 ................................ ACCGAGGCAACAGGTCGGCTGAGGCAGTCCGGG 6898 32 100.0 33 ................................ GCCAGCACGTCCAGCCGCTGCTCGATCAGCGCG 6963 32 100.0 34 ................................ GATCTTCGATCGCGACCGGCCGCTGAAGCCCAAC 7029 32 100.0 34 ................................ GCGGTGACGCTCGAAACGCAGTTCGACATCGCCG 7095 32 100.0 34 ................................ TGTCGATCACGAAGGATAAGCCGCGTGACGCCAC 7161 32 100.0 33 ................................ TACTGCCACCGCCTGTGCCGCCCGGTGATGGTG 7226 32 100.0 34 ................................ GCGACAACATCCCGACTGACGGCCCCGCCGGTGC 7292 32 100.0 33 ................................ GGCACCACGGGCGGCGCTGGCCTGTTCCGCAAG 7357 32 100.0 35 ................................ TCATCGCGCGGCGGATGCGCATCGACGAACCTGGC 7424 32 100.0 33 ................................ AGGCATTGTCGGCCAGGCTCAGCGCGGCCTGGC 7489 32 100.0 33 ................................ ATGGACGTCGTGCTGCGGTCGTATCCGCTCTAT 7554 32 100.0 33 ................................ TCGTTGTCGACGCGGCGCTCGCCTTCCACGATG 7619 32 100.0 33 ................................ GGCGTCCGCCGCCGTGGCGCTACCGTCCGGCTG 7684 32 100.0 36 ................................ TGCGCGCCCGTCACCGAGAAGTTGTTTGGCGCCCAG 7752 32 100.0 36 ................................ CTGGTATCCGGCGTCCTGGTGCTGACCGGCCTGGGC 7820 32 100.0 33 ................................ CCGATGAACGACTGCGCCGAGGCGGTGTCGAAG 7885 32 100.0 35 ................................ CATGCCTGGGCGATCAGCCGCATAGCGGTGTCCTC 7952 32 100.0 32 ................................ ATCCCGTCGGGCGACTTGCCCAAGAACCGGGT 8016 32 100.0 33 ................................ CGCGGCCTGTCGCAAGCCGAGCTGGCCGATCGC 8081 32 100.0 35 ................................ GTTGTTGGTGATGAAGCCGACCGTCTCCACCGGCG 8148 32 100.0 33 ................................ TCCCACACCTGGCGCCCCGCCGGACGGGAGACA 8213 32 100.0 34 ................................ GGCCTTGTGTTGCGTTTGCAGCGTCCATTCCGAT 8279 32 100.0 35 ................................ ACGGAGACGCTGCTGAAGACGGCGATCTCGCAGGC 8346 32 100.0 34 ................................ GGCAGGTCAGCGACTGGCAGGACAAGGCGGCCAA 8412 32 100.0 33 ................................ CCGTAAGGACCTGACGGTGCGCGGGGTGTCGCT 8477 32 100.0 34 ................................ CACGATCCAGACGGCGGCCACTACCGCCCGCAAC 8543 32 100.0 33 ................................ ATGGAGAGACGACATGGCACGCAAGCAGAACGC 8608 32 100.0 33 ................................ TGCGCCCGCTGTGCCCGGACGCTGTGCGGGTGC 8673 32 100.0 35 ................................ CATGACCATGACGTTGCCCGTGACCAGGACATCGC 8740 32 100.0 35 ................................ ATGCAATCCTACGATATCGTGGTGCATCCGCGGTG 8807 32 100.0 35 ................................ TACAATTACCAGGAGCGCCAGGCGGCGGGCGACTT 8874 32 100.0 33 ................................ GAGCCGTTGACGACGATCAGATCGACGTTGCCG 8939 32 100.0 34 ................................ CGTCATCGTTTCTTGCCCGCAGGACCAGCAGCGG 9005 32 100.0 34 ................................ CAGGCAAAGGACGACTGATGGCGCAGCTGTGGAC 9071 32 100.0 35 ................................ AACGTGGGTAAGTCGCTGTCGGTGCTGGAATGGGT 9138 32 96.9 33 .....................C.......... TCATCAGGATCATCGGCATGATCCTCTCCATCG 9203 32 78.1 0 .C........C.A...A.C..C.C........ | ========== ====== ====== ====== ================================ ==================================== ================== 44 32 99.4 34 GTCGCCCCTCACGCGGGGGCGTGGATCGAAAC # Left flank : TGTGGAAATAGCGGCGCCGCGATGCTGATGCTCGTGACCTATGACGTCGGAACCGAGGACCCCGCCGGCCGCCGCCGGTTGCGCCGCGTCGCGCGGACGTGCAAGGATTTCGGCCAGCGGGTCCAGAATTCGGTGTTCGAATGCGACGTCGACCCGGCGCAATGGGCGATGCTGCGCGCCGCGCTGCTGGACGAGATCGACCCCGCGAAGGACAGCTTGCGCTTCTACGCGCTGGGCGCGAAAGGGCGCATGAAGATCGAGCATGTCGGCGCCAAGGCCGCGCCCGACCTGACCGGCGCGATCATCCTGTAGGCCTGCGCCGCGCGAACCGGAAGCGACGCGCCCCCCAGCCGGAGATTCGCGCGCAGCCCAAGTCGTTGATATACCGATGCCACGCCGTCGCGGTTCAGCCGGGGCGGGGCCGCACCGGCGCGCGCGCGAAGCGGTTCGCGCAAAGCGGCGGATTGCGCGTTGTTTCTCAATGTGAAACTAGCGGTACC # Right flank : CGACACCGACACTACAACCCCGCCCCGCCCCCGTCAGCCCGCGCTCTTCGCCAGCGCCGCCGCGCCATCGGCGAAGCCGAGCATCGAGAAGGTGAGCGTGACGGTCTGGCGGATCTGGAGGCGGTAGACCGCGTCGGCCTGGTCGGTCACCGCGACGAGGGCGGCGAATTGCGCGGGGGTCAGCATGGCGCCGGCCTGGCACCCCTTGGGCTGGCAGGCGACGAACGGCAGCCGGACCAGTTCCTTGCCCTGGCGGACCAGTTGCACGCCATCGGGCAGCCAGACGCCGATCGGCGTGTCGACCGACAATTGCCAGCCCTTCCCGCCCGGCAGGGAGCGGAGCATGAACTGGAGCGCGACGTTTCTGGCGCCCGTGTCGTCCTGCAGCGTCACGGTCGACATCAGGCCACAGATGCGGACGCGCGGCGCCGGATCGGTGCGGGTCTCGCAATGCAGGTTCCACGCCTGGAAAGGGCGGTCGGAACCCTGCACCACCGGGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCCCCTCACGCGGGGGCGTGGATCGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCCCCCCACGCGGGGGCGTGGATCGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [45.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //