Array 1 34393-33847 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUCV01000026.1 Coprobacillus sp. AM17-34 AM17-34.Scaf26, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 34392 36 100.0 30 .................................... ATTTTTGAGTTTTTTATTTTCATACACTAA 34326 36 100.0 30 .................................... ATTTTTGAGTTTTTTATTTTCATACACTAA 34260 36 100.0 30 .................................... AGAAACCGTCAACCGAAATAGAGAAGTGCA 34194 36 100.0 30 .................................... TATTTATCGAAGAAGAACCAAAAGTAGCAG 34128 36 100.0 30 .................................... ACCATCTAATCCTGGTTCTGGTGAAGGTGG 34062 36 100.0 30 .................................... CGAAAAAGCTTTTATATCATTGTCAAGTTG 33996 36 97.2 30 ................G................... TATCAGGATGTTCGATTAAATAATTAGATA 33930 36 88.9 6 .....................T....AA.......A TCCATA G,CTTA,T [33894,33897,33907] Deletion [33889] 33882 35 75.0 0 ......T...T.......A......AA-..A..T.G | A [33867] ========== ====== ====== ====== ==================================== ============================== ================== 9 36 95.7 27 GTTTTAGAGTAGTGTTATTTTGAATGGGTACAAAAC # Left flank : GAAATTAATGAAATATTAAAATATATAACTTATAAAAAAATAAGTGTTTTATTTTTAGAAAATAGTTATAATAGAAGTGTGTATTTTGAAAATGAATATATCATAGATAATGATTTCTATGATTACACTGTTCATAATAACGGAAGTTAACGTTGGCTTTTATACTATTAAAACCTAATTTGA # Right flank : AATCCAGAGATATTTATCTCTGGATTAAATGTTAATATAAAATAAAAAACAACCCGAAGATTGTTAATTATCAAATGGCGTCCACGAAGGGATTCGAACCCCTGACCGCACGCTTAGAAGGCGTGTGCTCTATCCAGCTGAGCTACGTAGACATTGCTTACTTTCAACTGCTCATATATATTATCATGAATATGAAATGATTGCAATAAAAAATTACAATTTTTTTAAAATTTATATTTTGAAGAGATATATATAAAATAAAAAACAACCCGAAGGTTGTTGTTTATTAAATGGCGTCCACGAAGGGATTCGAACCCCTGACCGCACGCTTAGAAGGCGTGTGCTCTATCCAGCTGAGCTACGTAGACATTGCTTGCTTTCAACTGCTCAACTAGAATAGCATATATTTTTTTAAAAAGCAATACTTTTTTAAAAATTATCTAAATTTTTGAATTCAACCTTCAAATCTTTACCTTCTACATAAATAACACAATAACTTC # Questionable array : NO Score: 2.74 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:-0.30, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTAGTGTTATTTTGAATGGGTACAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [21-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 1 76001-77596 **** Predicted by CRISPRDetect 2.4 *** >NZ_QUCV01000007.1 Coprobacillus sp. AM17-34 AM17-34.Scaf7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ========================================= ================== 76001 31 100.0 40 ............................... TAACTCATTACTTGTTTAATTGTTAAAAGTGTTTCTACCA 76072 31 100.0 39 ............................... TATAATGAGATATTATATTTAATTTATTTTTATTATTTT 76142 31 100.0 37 ............................... TAAATTAATAAGAATATCTGCATATATTATTATTTTT 76210 31 100.0 36 ............................... TTTTAATTAATACCGCTTTAGCTGTTTCATGATCTA 76277 31 100.0 38 ............................... TATTTTGTGTTATCCACTTTTCTAGGTTGTTTCATCTT 76346 31 100.0 33 ............................... AATTGATTTACTACTGCTCTACCGCTTTGACCT 76410 31 100.0 37 ............................... GTATTGCATTTTATCTGGTTTTGTATCATAAGCAAAT 76478 31 100.0 35 ............................... TCAAAATAAAATAAAATGGCTCTACAAAAAATACA 76544 31 100.0 37 ............................... TTCATGGCTTTCCACCTCAATGTCATTCTACAATTTT 76612 31 100.0 38 ............................... TCGATTGCATTGTCAGCGCATAGGTCTAATAATTCTCT 76681 31 100.0 33 ............................... TCGATTTATATTTTCTATGGTCATTGCCTTATA 76745 31 100.0 38 ............................... TTAATTATAATTATCACACGCTTTACAAGATATACAAT 76814 31 100.0 36 ............................... CCAATAGGCTCTACAATATAATACATTTTTCCATTT 76881 31 100.0 38 ............................... TGATACATTTGTATCATCAGCAATCATATTTCTAATCT 76950 31 100.0 37 ............................... TTTTTTAACAATGCTTTTGTAATTATCTCAGTTGATG 77018 31 100.0 36 ............................... TGTTGCTAATAATATTTCCTTATTTAAGTTTGCTTC 77085 31 100.0 37 ............................... TATTTTTACTTTTCATATATTCATACTCTTTTTCTTT 77153 31 96.8 37 ..........................G.... AATTTCTATTGAGCCGTCGAATTCATCAATAACTTCA 77221 31 100.0 37 ............................... ACTGGTTCAAGAGCTTGTTTTAATTTACTTATTGTTC 77289 31 100.0 38 ............................... CAATTTTATTTTCATCTCAGATGTTTCTCCTTACATTC 77358 31 100.0 37 ............................... AGACTTCCTAAGATGTTCCAATCAGCATCAGCTAATA 77426 31 100.0 41 ............................... CTATATTTACTTCACAAAAATCAACATGCCATTTTACTTCT 77498 31 100.0 37 ............................... TCACCATCATTGACTAGCTGCTTTACTTCTTCTAGCG 77566 31 83.9 0 .......................C...TTTT | ========== ====== ====== ====== =============================== ========================================= ================== 24 31 99.2 37 GTTAGATATCATACTTATTAAGGATTAACGC # Left flank : GTGAAGTTCACTTGCTTTCTAATTACATCGCTAATGAATCAAATGATTATAAACCATATATTATGAAGTGGTAAAATGTATATTATTTGTACTTATGATGTAAAAAGCAAGAACTGTCCGAAGTTTATGAAGTTATTAAGAAGATATCTTTTTCATGTTCAAGAATCTGTATTTGAAGGTGAACTTACACCAGCAGCATATAAAAAATTAACTAAAGAATTAGAAAAAATTATTACAGATGATGATCATGTAGCAATCTATTACTCATATAATTCTAAAATGATTAAAAAACAAGAAATCGGTAAATCTATTGATAAAACATGTTTCATAATAGATTAATATCGACTATCCCCTGATTACTATAAGAATTTCATCATAAAAAAACTTATATTTTTAATAGATAGTCGATATTTCTAATCATTTTTCTTCTTAATTTTACATATTTTTAGTATATTAACAAATCAATTTATATTATTCATTAAATATGTTAATATTTCATT # Right flank : TTATTTCTATCTAATAATGAAAAAACTATATTTTATGTTCTTCTTTTAGTACAATGAAGTTATAAGAAAAAGGAGAAAAGTATGAGTAAAATTGTATTTTTAGATGTTGATGGAACTTTAATTGACTATGAAACAAAGTTACCTGATTCAGCAAGAAAAGCTGTTGATCAAGCCAGAGCTCATGGACATAAAGTCTATATTTGTACAGGTTGTTCTAAAGATGAAATCTTACAAAGAAATCTATGCGAGCTAGATGGGATGATTTTAGGAAATGGAACATACGTGGAAGATCATGATCATGTTATTATGCATCAAGCGATGCCTTTAGAAGAAGTAAAAAAGGTGGTTCATTGGTGTCAAGAAAGAAATCTTGCTTTTTACTTAGAAACAAATAGTGGGGTTTATTGTAATGATCAAATGATTAAAGATGGACCAGCTGTCATGATTAAATACGGTCAAGGTAAAGGTGCAGATCTTTCAAATGCAACAGAAAAGGCAAA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTAGATATCATACTTATTAAGGATTAACGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [90.0-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //