Array 1 64781-63312 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACCKB010000030.1 Endozoicomonas sp. SM1973 K2-2-1_scaffold30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 64780 28 100.0 32 ............................ AGCACTAAGAAGTGCTGCAACAACATTCTTTT 64720 28 100.0 32 ............................ TTGTTAATCATCATCAGATAGTGTGGGTTTTT 64660 28 100.0 32 ............................ AGCCAAAGTGGTCAGAAATGTTCGATGACGAT 64600 28 100.0 32 ............................ TACTAACGCAGCTACCGCAGCAATTACCCAAC 64540 28 100.0 33 ............................ TTACAGCAGGTTTGCGAAAAAATGGACTTTGCT 64479 28 100.0 32 ............................ AATAAAGGAAGAAAGGAAAGCCGCGCTTAAAG 64419 28 100.0 32 ............................ TATTGTCTTGTTGCTGGTATTGACTATGTATT 64359 28 100.0 32 ............................ TAACACCAAATCCCAATCATTAGCTGGAATAG 64299 28 100.0 32 ............................ ATGATAATATAGTTACCACGCTGTAATGTTGG 64239 28 100.0 32 ............................ TTGTTAATCATTAATTTACGCATATCTTTTGC 64179 28 100.0 32 ............................ TTATTGGCTGGGGAGTAGCTTTACACCGTTAA 64119 28 100.0 32 ............................ AATCAGTTGCTCTTGTGAGATTTGCGCTTGCT 64059 28 100.0 32 ............................ CATTCATTTAAAATCACAAGCTAAAGGTGTTA 63999 28 100.0 32 ............................ TGTTTATGCAAAGATTGCAACAATTATTGGTA 63939 28 100.0 32 ............................ TTTCAAACTTTGAGGACTCATATGGACATAGC 63879 28 100.0 32 ............................ CTTTGGAGTCCGCGCACTAGATGTCACAACAA 63819 28 100.0 32 ............................ TTTTAAATACATTTTATAGCGATTAATAAATA 63759 28 100.0 32 ............................ CTCCTAGTACAGTAGTACCGCCTCAGCACTCA 63699 28 100.0 32 ............................ TATAGAGCTATGTGTCTTCTTCTTCACATGTT 63639 28 100.0 32 ............................ TCTCGAAATTCCTGACCAGCCAAAGTGGTCAG 63579 28 100.0 32 ............................ TTTGACGCCGGTTTCCTTTGGGATGGTGCCAC 63519 28 96.4 32 .........A.................. TATGTGGTGAATTATGAGGATTATCACTAATG 63459 28 100.0 32 ............................ AATCTTGAGAGACTCGCCTATTCTTCGCGTAA 63399 28 96.4 32 ..........................T. AGCTGGTGTTGGTAATAGAGCAAAGCCTCCCG 63339 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 25 28 99.7 32 GTTATCTGCCGCATAGGCAGCTTAGAAA # Left flank : AGAATCTGGTGGTATCAAGTTAATCCAGTGTTTGAATACACCTGAAGTTAATACCTTTGTTAGCTACAGACGGAGCCAACGTGCGGATCGAGGTAGCCCAAAAGGCCTAAAAAAAGGACAAGAGCGCTTCATTCAATATCTAAAAAATAAAGGCATTGAGCCTGATCAAACCATTTTAAAAGCACGTGCTCATCGGTGGCATAAGGAGTATCAAGCTGAGCGAGCATTTCTATCGATTGGCAGCAAAAGCACAGGCCAGCAATTTCAGCTGTGTATACAGCAAACTCTTTCTAGCAAACCCACTGAAGGCTATTTCTCTAGCTATGGGCTAAGCAAGAGTGGAACAACGCTACCTTACTTCTAGCAAACCTTCGTTTGTATAGGTGCTCTTTAACAGACTGATATTAAAGCATTTTTATTCTCTCTGGGAAAAGGAAGGTTTTTCCAGTGGATTTGATGTTTTTGTTTAAAGATGAGTCACTTAGCATCAAGTGATAACC # Right flank : ATTACTAAATGAAAATGGTGATAAAAATAACGTTCTCTACCATTTTATCATCGTTGGTGAGTGAGCAATTAAATGACTGATATTAAAGTATACTTTGGGAGTATCCACTTAACCTTTTGAGGTAAGTTGCTTATGGTTGAGTCGTAAGATAACTAAGATTAGCTCTAAAAAACTGGCTTAATTCCACTCGCGGCTCCCTTTGCAAGCATGTGTTCCGTCTTCAACTCTGACCTCAACTGTTTCACCCTAGTTGGGGTTTAGCCATATCAATATAAACCCCAACAGTTAGAAAAAAAGACTGTCTTATTGTGACTGCTTCCCTATCCAGTACTGAGCTTATTTCATTAAATATTTAGCGCTTTTGATAAAGGAATTTGTTCATTATGCTCCACCCTAACTCAAATACCTATATTCTCGAAATTCGTCACCGAGATCGGCCTGATCAGTCTCCTATTGCTCATTTGCTGGTAGAACGCGAGGAGAAATATCGATATTCCCAA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATCTGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTTTCTGCCGCATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 73511-74137 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACCKB010000030.1 Endozoicomonas sp. SM1973 K2-2-1_scaffold30, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 73511 28 100.0 32 ............................ TTTCCCAGCCTGGATGATGTTGATGTGTATGA 73571 28 100.0 32 ............................ ATGGCTGCATGGCGTGCATCCATGGGGCTGTC 73631 28 100.0 32 ............................ TGTTTCAGTGGACCCACTACCAGCTGACAAAG 73691 28 100.0 32 ............................ ATTACAAAGCCAAAGACGACTATGGTCGTGTG 73751 28 100.0 32 ............................ AGCCAATGACTGGGATTTGGTATTAGGTCAGT 73811 28 100.0 32 ............................ TATTGCCTTGTTACTGGTATTGACTATGTGTT 73871 28 100.0 32 ............................ TCCCTTCCTTTATGCTTGACAAATAACTGAGG 73931 28 92.9 32 .C.........C................ TAGAACTGTAGGAGTTGTATTTACAGCTAATA 73991 28 92.9 31 .C.........C................ ATTTGCATGTAGGCTGGCTAACTGTTTGGTA 74050 28 92.9 32 .C.........C................ TCGTTAACGTTTCTACCAAAATTTTCTATTAA 74110 28 78.6 0 ........T..C........T...T.CT | ========== ====== ====== ====== ============================ ================================ ================== 11 28 96.1 32 GTTATCTGCCGTATAGGCAGCTTAGAAA # Left flank : TTGGTGGCAAATAATAGTGAAAACATCAGGCAAGCAGCAGGGTAATCCAGTATCAGCAAATAGTGCAATAAACTTAAAAATGAATGTTAATGAGAACAGACTGCTGTTACAGCAACTATTTTCATCCGCTCAGATTGAAGATGAATATCAATCATTGAAGTCTCTTCTTTATCAGGATAATGACGATGATTATACCCGACAAATGTTGCTTGGATTTGAGTTTGAGAATAATGGTCAAACACTATTACAGATTTCATACCACTTCTGGTTAGGTGCGACTAAGAAACATAATGGCTGGGAATAATACAATTATCAACTCATATACCGTCGTCGCTTTTGCTATACAGCTTAAGTAAACTAACCTCAATACTTCGTTTTAGCTGCTGCTCTTTAACAACTTGATTTTAAGGCACTTTTATTTTTATTTAGAAATGGAAGGTTTTCCAGGTGGATTTGATGTTTTTGTTTGAAAGTTAGTCACTTAACATCAAGTGATGACT # Right flank : TAGTGAATAGAGGGCTAGAGGATCAGCTCTCCAAACACCCTATTACTGTTATGGACCAATAGTAGGGTCGCATAACCTAGCAAAAGAAGCGAGGAGGTCAATTTTTAGTCTATTAATAATCTTTAATCACAAATATTAAGCCTGCTTATCCTAAAGAAACATTGCAATCGTGGGCTCTAAAACTAGTTGTGTAGCAAA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTATCTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : GCTATCTGCCGCATAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTAACTGCCGTATAGGCAGCTTAGAAA with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //