Array 1 1133438-1137126 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP045418.1 Pseudoalteromonas sp. THAF3 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1133438 28 100.0 32 ............................ TATCTGACCGCGAAAGAAGTGGAGAACATCGT 1133498 28 100.0 32 ............................ AGAGATAGCCCCTATCATCGCGCAAAGCGTAT 1133558 28 100.0 32 ............................ CAATTGAACTAAGAACCCAAGAGACTTCGGAA 1133618 28 100.0 32 ............................ AATTTTGCGTAAGCGCGCACGGTGAGTCTTAA 1133678 28 100.0 32 ............................ GCTGAGTTGCACTACCCAAACTGGTATCAGCG 1133738 28 100.0 32 ............................ TCTAACCTCGACAACATTTTCTACGATTGGGT 1133798 28 100.0 32 ............................ TCAACAGCGGCTTTATCGGCGAGAGGCTCACA 1133858 28 100.0 32 ............................ ACTCAAGGAATCGGGTAGTTGGTCTGCGTAGA 1133918 28 100.0 33 ............................ CCTTCTCTAAATGAGTCAACGCATGATTGAGAT 1133979 28 100.0 32 ............................ TCTCCTACCAAAGGCGCTTATTATGCGATACC 1134039 28 100.0 32 ............................ TTCGGCAGCAGCTTCGCCTTCTTCGGGGCCAC 1134099 28 100.0 32 ............................ TAAATCAGCCGTGCGGAAATGAATGCGGCGAA 1134159 28 100.0 32 ............................ TTATAAGATAGAAAGCCTAGGAAAACGACAGT 1134219 28 100.0 32 ............................ TTCAAGGTACTGATAACTATTTTGATGGTTTG 1134279 28 100.0 32 ............................ TGCCAGCTGGGTGAGTAAATGTATTGCCTTGC 1134339 28 100.0 32 ............................ CACAGCAGGGTCTAGCGCTACACCTTTGCGGC 1134399 28 100.0 32 ............................ ACTTGGATGAAAAAGGACGCCCGCCCCACGGT 1134459 28 100.0 32 ............................ TCTTTTTATGGATACCGGTGCCTTTCAATTTT 1134519 28 100.0 32 ............................ GCTGATAAGCTCACATCGCCATTGGCGTTAAT 1134579 28 100.0 32 ............................ AATGAAGACATTGGAGTCATTGCCAGCACGGC 1134639 28 100.0 32 ............................ GCCAAATTCCAACCCTATGGAGCAAATACAAT 1134699 28 100.0 32 ............................ ACCAACTGCCAACACTGCCCGTTAAATCATCG 1134759 28 100.0 32 ............................ AATACGCTTTTCGCATGCTCACCTGAGCCTGT 1134819 28 100.0 32 ............................ AATAGAGCGCCAGCAGAAACGAATAATGTCAT 1134879 28 100.0 32 ............................ CGATGCCTTGAGTGGTGCGCGACTTACTTTTG 1134939 28 100.0 32 ............................ AAGCTATTTAGATTACCGGACATACCCGACAT 1134999 28 100.0 32 ............................ GTGTCGCAAACGTGTAGCCACCGTCGAAAGGA 1135059 28 100.0 32 ............................ AACCAACGACGCAATCAACACAAGTACAACCT 1135119 28 100.0 32 ............................ AACTGGCGCGGGGGCGCTCTTTTCTGCAAACG 1135179 28 100.0 32 ............................ AACGTGTACCCAGTGCACGCGAAAGGCTCTTA 1135239 28 100.0 32 ............................ GATTATGATGGCGTTTACTTTGGCGATTTGAA 1135299 28 100.0 32 ............................ TGATGACGCCAACTTTAGCTATGACAAGACTT 1135359 28 100.0 32 ............................ ACATGGAGGTGGGAGGGTAGGCGACTCTATTT 1135419 28 100.0 32 ............................ ATTAGAAACAAAACAAGCAAGGCTGCGCCCGC 1135479 28 100.0 32 ............................ AATCTGGTTTGAAGCAACCTGATTATCAAGAT 1135539 28 100.0 32 ............................ AACTGCGAAGTAAGCAGATAAGAAAACAGCCT 1135599 28 100.0 32 ............................ TCAAAGGCCAATTTACTGTTTATCACTCGCCG 1135659 28 100.0 32 ............................ AATGGCGACCAGAGCGGCGGCAACAGCGGCTT 1135719 28 100.0 32 ............................ TTAAAACGAAAAATAAAGGCGGTACCGCCGTT 1135779 28 100.0 32 ............................ ATCACATGCTCTTCTAGCCAATCAATGTCGTA 1135839 28 100.0 32 ............................ TTTTTAAAGGAGGTATAAACCGCCCTGGATAT 1135899 28 100.0 32 ............................ AGTTGCTGTCGTCAACGTCGATAAAATCGAAT 1135959 28 100.0 32 ............................ TTTTTCGTAGGCTCGAAATAGTTTTCCGTTTT 1136019 28 96.4 32 ...G........................ AAAAATTCTGCATTTCGTCCAGGACAACCAGG 1136079 28 100.0 32 ............................ CCAGTCGTTAATCTCACGCCCGTTAACCGACA 1136139 28 100.0 32 ............................ TACCGTGAAAAAGGCGACTTATCGCGTGAAAT 1136199 28 100.0 32 ............................ TGGGCAAGCAATTTTAATATTCGCCGCTTCCA 1136259 28 100.0 32 ............................ ATCATCGCCGAAGCGCATAATAAGGGGGCTAG 1136319 28 100.0 32 ............................ TATGAGGGTTGAAAGAAATACCGTACGTTCCA 1136379 28 100.0 32 ............................ GTACGCGCACAACCAAGGTGATACGCCTAAGT 1136439 28 100.0 32 ............................ TTATGGACCAAACAACAGGTTTTGGTGGGAAA 1136499 28 100.0 32 ............................ TTGGGTGGCAGTACAAGCAACTTATTTTTTAT 1136559 28 100.0 32 ............................ TTGGACGCAATGAGTGCAACACCGAGCACCAG 1136619 28 96.4 32 ..........A................. AAAAGCAAGAGGTGGTAACCCAGACTATTGAA 1136679 28 96.4 32 ..........A................. ATACATTGCAGGGTTGTAAGTCTCGACAATAT 1136739 28 96.4 32 ..........A................. GGCACAGACTTTACCTGGCGCTACGCTTCACT 1136799 28 100.0 32 ............................ ATCAACGCCCCAACACAAAAAAAGTGCCAGCT 1136859 28 100.0 32 ............................ GAAGGTGACAGCACAGAATGCAAGAATCAGCA 1136919 28 100.0 32 ............................ ACAAAGAAACCCCGCATAAAATGAGCCGAGCA 1136979 28 100.0 32 ............................ TTGAAATACGAATCCACTGCATGTATGCATTC 1137039 28 96.4 32 .................T.......... TTTATAATTTGTGAGCCGTGATTGTCTCTAAT 1137099 28 75.0 0 ...T.....T...T.....C....TC.G | ========== ====== ====== ====== ============================ ================================= ================== 62 28 99.3 32 CTTCACTGCCGAACAGGCAGCTTAGAAA # Left flank : CCAGAAGAAGTAACATGGGTGAGTTTTTCTCGTCAGCATGTTAAATCACCTGAACGCATTGAGCGTGAGATGCAAGAAAAGGCTGAACGGTGGTCAGCTAAAAGTGGTAAGCCTTTAGTTGAATGCTTAGCAGAGTTAGAAAGAACTAAACCTTCTTCAAAATGTGACTTACCTTTTGTTTATTTGCACAGTCAACAAACAAAGCAACGTTCACCAGACATTAATAGTAAATATCCTTTGTTTATCAAGTTGCAAGAGTTTACTGGTAAGTCAAACGGTACATTTGACTGTTACGGATTGAGTTCAAAGTCAAATGAGGAAAATGTGAATGGGTGCGTGCCTCAGTTTTAACAAATAAAAGGGGACTTTTACCCTTTATTTTTGCTCTTTAAAAATTTGCATAAAATACAGTGTGTTGCAACATGCTATAAAAATAAGGTAAAAATTGGTTTTTTATCTTAATAGCTTGTTGCAACTTACTTTTTTCCGTTTACTCTATA # Right flank : GTGGGCTTGATGTTTTTGAGTTGTGTGTCGTTAAGTGGTTTAACCGTTTTTGCCATATCTACTATTCCCTGAAGACCTTTAAACTTAAGGCTTTGGCGCAGCGACGTACTACGAGAACGAACACTATGTACTAACTTAGTACATGAAGCAGTACATAAACAACTGAATTTCAAAAAAGTGGGCGTACATTACAGGCATTAAAAAACCCGCTAAGTCTTTATTCTCAGCGGGTTTTTAAACGTTTTCGAACTTAATCGAACAGTGAAGTGGTGGAGCTGGGGGGATTTGAACCCCCGTCCGGAAAACCTCGACCATCGGTCCTACATGTTTAGTGTCGTCTTTTGGTTAACCTTTGAGTCTCGGACGCACACGATAAACAAAGGCGAGGCCGCTTAGTTTTAACCCTTCAACCCCGGCCAGGGTTTCCGTAGCGAGTCTATGTAGGGTGACACTTCAAAACCGGGTCCACAGACATACACCGGAGAAGTGCTAGCGGGCTA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGAACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGAACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-61.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //