Array 1 965371-965055 **** Predicted by CRISPRDetect 2.4 *** >NZ_LANC01000011.1 Teredinibacter turnerae strain 991H.S.0a.06 H154DRAFT_contig000007.7_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =================================== ======================================= ================== 965370 35 100.0 33 ................................... CTTAGGGGTTCTCCGTAGAGGATTAAAAATGTT 965302 35 100.0 39 ................................... ATTATGGTGAAAACGCGTGGCGTGATAGTGGAACAGCGT 965228 35 100.0 35 ................................... TCGTAACTTGCGTAGCGAATTTGTTGAACAGTAGC 965158 35 100.0 34 ................................... TATGAATCAGACCCACCACTGCCACCACCACAAG 965089 35 85.7 0 A.....................A..A.T..G.... | ========== ====== ====== ====== =================================== ======================================= ================== 5 35 97.1 36 GTCCGAACAGGGCTTAGCCGAAGGGCTGTTAAGAC # Left flank : ACATTGGGAGAACCGCCGCTGATTATGTTCGTGTTTAATCCACAGTCGAAAATACAACTGCATGACGCACAACTTGCGCAACTTAATCGGTATAGTAACTACACGGTAGTGAATTTCCCAGGGTCGCTGCAGACGGCATTGGGAAATACCTTGAATAGTGTATAACGCACGCTAAGGCGCGCATACGAGAGAAAAAAGCGAGCTTGTAGTTAACTGTCGGTGTATCAAATCCACCTGAAAAACAAGGCCAGGGTACGGGCCAATACTATAATCCGCCACATCAAACCGTGGCGCTAGTTGTAACATTTTGGTTAACGGCTTGAAAAATAACGATTTTTTACCCACAACCCCGAGGAGGTTTGATTATTCAATGAAATCAACAGGTTACAACGCCTACGACCGCCAAATCACGGCTCAAAGGCACCCAAACCGGAGACCCTGGCGGAGGTTTGACAAAAACCACGCTAAGCGCCTGATGATAAAAGGCTTATTTGAGTACT # Right flank : CGTGGCTTGTGCTTTATCGAAACCCTGTCGTCGTGAAGACATTCACCGGATAATTTAGGTCAGGCCTCAGTAATACGACTGAAGCACGAGCATTACGTTTAATTAGCGCTGCGTTCGATTTATTTAATTGTTGGGTGAAAAAGCGTAAATGATTAAATTTGTCGGCCCGCACGCGGTGTTAATTAAGTGGTACATAATGCCGCTGAGGAGACGGTGGCGCGGCGTTTCGACGCGCTAATTCCGCAAGTATGGAACTGTGTGGGGGAGCCCTGATAAAAAGGGTGTTTTACCACAACGTGCATTAATGTTTTTTTCACACAATTTTATTTTTATGCTGAACACGGCGTTGAACGTGTTTGTACCGACCAGCGCGCAGAAAAATACTCATAAATCTGATTTTATCGAGGTTGTCACGGGAGGAATTCGGTTTTCTACAAAATCTTGCAGCACCTATACCGCACCACACATGTCTACCGGTCGCCAACCGCAGGTAAGCACGC # Questionable array : NO Score: 2.91 # Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAACAGGGCTTAGCCGAAGGGCTGTTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.60,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.15 Confidence: HIGH] # Array family : NA // Array 1 458206-456225 **** Predicted by CRISPRDetect 2.4 *** >NZ_LANC01000010.1 Teredinibacter turnerae strain 991H.S.0a.06 H154DRAFT_contig000006.6_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 458205 29 100.0 32 ............................. ACAAAAACCAAGCCGTGGGGCGTGGGCTGGGC 458144 29 100.0 32 ............................. ATCCGTTTGAAGTTGAGTACTTGGAAAATGGC 458083 29 100.0 32 ............................. CACCATACAAACACTCCTGCGCCGCAAAAAAA 458022 29 100.0 32 ............................. CCCTGTGCGAACGCGGCAACCGCACTGCGAAA 457961 29 100.0 32 ............................. AGGGTGTTTAGCGAAGAGCATAAAGCCAATAT 457900 29 100.0 32 ............................. TGATTGAAATTTATAGAATAAATCGTATGCGT 457839 29 100.0 32 ............................. CCCAGCGCCTTTGCCTGCTTGACTGAAAGGCT 457778 29 100.0 32 ............................. TGCGTATATTCAGATGGCCACTGATCGATGTT 457717 29 100.0 32 ............................. CGCCCATGGTCTTAACGATTTAACTGTTTTTG 457656 29 100.0 32 ............................. CTTTCAATTGGCGGTGAAAACCGTCGCAACTT 457595 29 100.0 32 ............................. TTAAAACACCGGTCAGCGGGCTACTGGGCGAG 457534 29 100.0 32 ............................. GCTTGCAACCGGCGATACGCAAACATAACTCC 457473 29 100.0 32 ............................. TGGGCCAGATAGAAACAACCAGCGCGGGCGAA 457412 29 100.0 32 ............................. CATCCACGCTCGGCGCAGGAGTGTAATCGAGC 457351 29 100.0 32 ............................. GGTTTGGGCGCACTAAGCTTAACTCTATAGAC 457290 29 100.0 32 ............................. ACGGCGTGGTTAGTTTTTTTCGTGATATGGCA 457229 29 100.0 32 ............................. CAGAAGGAAAACCGCGAGTGGCGTGCGGAGAC 457168 29 100.0 32 ............................. TGTCTATAGCCAGCGTGTCGTAATTGTATTTA 457107 29 100.0 32 ............................. GTGGTGATTGGAAATGACAACCAAACACAAGA 457046 29 100.0 32 ............................. TGGCAAATATGTTTTCTCGCGCGTTAATACGC 456985 29 100.0 32 ............................. TTTCCATGCGTTGCGCGCGAGCATGTACCGCG 456924 29 100.0 32 ............................. CGCGCAATAGCGCACGTACAACGCTTGTTCAC 456863 29 100.0 32 ............................. ACACGCTAAATGGCTGCATTTTGCCATTTGGG 456802 29 100.0 32 ............................. CCCTCAGCTCTCCACCGTGGCCAGCAGTTGCT 456741 29 100.0 32 ............................. CGGGCATTTTAGGGAAGAAGTAAACGGCGAAT 456680 29 100.0 32 ............................. AGTAGAGAGATCGATACGCTCGCTTTATCTAT 456619 29 100.0 32 ............................. TCGTGCTTGGTTCGTTGGCGAGTCATGCGACC 456558 29 100.0 32 ............................. GATTAACGGTTTTGCGGTGGAATCGCTGAGCG 456497 29 100.0 32 ............................. CTTGGGTACCACATATCTGCGGCCATGTACCT 456436 29 100.0 32 ............................. GAAAATTTGCTTGTAACCTTGCCAATAACGGC 456375 29 100.0 32 ............................. CGATGGCACGCTGGAGCATCATACTGAGACCA 456314 29 100.0 32 ............................. TTTAAAAGTGAGCCGGAGGGTTCCGGCGCTTT 456253 29 79.3 0 .......................TTTTGC | ========== ====== ====== ====== ============================= ================================ ================== 33 29 99.4 32 GCGTTCCCCACGAGCGTGGGGATAAACCG # Left flank : ATTCTCAACCGGCTTATTCCTGCGATTGAAGAGGTTCTTGCCGCTGGGGAAGTTGCACCCCCGCAACCGCCGGACGAATCCGTGCCGCCAGCTATACCACTTCCCCAGAATATTGGTGACGAAGGGCACCGAACCTGATGGCATTTACCGTTGTGGTTACCGAAGCAATCCCGCCCCGGTTACGGGGGCGTCTCGCGGTTTTCATGCTGGAAATTCGTGCAGGTGTATATGTCGCGGATTTATCGCGTCGGGTTCGGGAAAAAATCTGGGAATACCTGGAGGCCGACCTCGAAAACGGCAATGTAGTGATCGCCTGGGCCACTAATACCGAATCCGGATTTGAATTCCAGACCCTTGGTGAAAACCGCCGCGAACCTGTGGATTGGGACGGCCTGCGCTTGGTCTCCTTCCTGCCCAAAGAAAGCGTCGACGATCTTTAAAAATCTGGTAGAAAAATATATCGCTAAAAACACCTTGAGAATCAATGGTGTACACTAAGT # Right flank : TCGCTTTCCTCGACGCTGAACAATTTGGAGCCTGCTGGTTAGACTCTGCTGTCTATGCCTACCAGTTTAATGTTCCGGTGTTAGTTACGTATATTTTAGACGCAAGGTCCATGCGAGCGCATTTTTCATCTGCTTCAAGAGTAGAGCCTTTTGCCGCATTGTATAAACCCGCACATAGCGGCTCCTTGGCACCAAACGCACTACGTTGGTGTGAACGCATATTCTTTCGCTGTTCGACGTAGGGAGATCCGTGTTAGAGGCTGCTGATTCAATGTCGAAACTGGTAAAACTTTGGCAATGGTTGGTCATTTGCGGTTGGAGACTAGGAGAAATCGGTCAATGAAGGGTCATTTGCAGCTGGATACTAGGAAAATGCGGCCAAAGGCGGTTCAAGAGTAGTTGGAGGCAGGCGAAAAGCGGTCAAAGGTTGGCCATCTGTGGTTGTAGACTGGGAAAACCTCATCAAAGGGCGGTTACGGGAGGTTGGAGATAGGGCAAAC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCACGAGCGTGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCGTTCCCCACGGGCGTGGGGATGAACCG with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 655839-654519 **** Predicted by CRISPRDetect 2.4 *** >NZ_LANC01000012.1 Teredinibacter turnerae strain 991H.S.0a.06 H154DRAFT_contig000008.8_C, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 655838 37 100.0 34 ..................................... GCGAAAAAGAACAACCGATTGCACAAACGCCCCG 655767 37 100.0 35 ..................................... TGGGAGAGGTTGACGCCGGTAGCGCCAGAAATTCG 655695 37 100.0 34 ..................................... CCGCGCGCATCGCGGAATTTAAGCACCCGTACGG 655624 37 100.0 33 ..................................... TCCAGCCTGGACTTTTGCCAAAACAACGTCGGC 655554 37 100.0 33 ..................................... TAGCGCAAGTTTTAGTGCTTGCTTATATACAAA 655484 37 100.0 34 ..................................... TAGACGTCCAGACGCATTAGTAGTGACGTAGGTT 655413 37 100.0 35 ..................................... TACGTTGTGGATATTTAAATGCCACAAAAAATGAT 655341 37 97.3 35 .........G........................... CCTTTGCGGGTATAAATCTGACTTGTTTTTTTCTT 655269 37 97.3 34 .........G........................... GATTGCGCGCTGCTCAGAAATAACAATTCGCATT 655198 37 97.3 34 .....................C............... CGCTTTTGGTCTTTTCGCTCCCTTCGTGCGTTTT 655127 37 94.6 35 ..............A......C............... TTGCTGGATATTAGCCATAATTCACCCAAAAAAAG 655055 37 91.9 35 .........G...........CG.............. GCAAGAGAGTCTTTAAGTTCAGCGCCGTCTATTTG 654983 37 94.6 34 .........G...........C............... ACCTTCCGAGAATGTGCCGCGCTTAAACTCGCCA 654912 37 94.6 33 .....................C.....T......... CAGGCACCAAACGTGAAATAAGGCGTTTTGATC 654842 37 100.0 36 ..................................... GGGTCAGTTTCACCGTCGCAATGAAACGTGTGCACG 654769 37 94.6 34 ..............A......C............... ATGTTACCTATGTACTCACCGAAGCTTTTTAGAT 654698 37 94.6 34 .........G...........C............... AAATAGACGTTTGTGTGATACGCGATATAGGTGC 654627 37 97.3 35 .....................C............... CGCCTTATTCTCTATCCGTTTTTGCTCACGTCGCG 654555 37 91.9 0 .....A...............C..........A.... | ========== ====== ====== ====== ===================================== ==================================== ================== 19 37 97.2 34 GCGTCGCTGAAGGCTTAGCCGTTAAGGCTGTTGAAAC # Left flank : TAAAAAGCGGGCCCAGCGAACTGCGGCACAGGGGGTTTAATAGTAAAAATTCAAAACAAGTTAACCCGTAAATTGCGTAAGTCGCTATTATTATAAACTGGTGCAAAACGTTTTAATGTTTGGGGTTTTCAGCTCGCAATGGTTGCAGCACCTTTAAGCAGGTTTTAAAAATAGCAGGCAACAAAAAAGGCTAACAAATAGCAGCTAACAAATCGCAGCTAACAAAGAACGGGTAGCAAAAACAGGCGGTTTTTCGCTAACCTCTGGTGCTGTTTGGGGCCTTGCAGTGCACAGCGTAAAAAAGCCCGGTTAAAACAACGGGTTAGCACCGGTTAGCGGGCTATGTTTAAGAAGTTGGTTAGCGAGCCGTTAAAAATCAAAGAGTTAGTGTGGATATGGCACAGATTATCGGTATACTCGATACGCGACTATCAGGAAAAAGCGGGGTTAGCGAATATTGCACCGGCAAGCCGCTACCCGCAAGGGCGCCAGCACCCGGC # Right flank : CCGATTCCGACAGCGAATGCCATGATTGATTGACCTTGCGGTTGTGGGGCTGGTAATTTTAGGCCGGTGGCCCGGTGCGGTTGTGGCCCCAAACCCCAAGGATATTTTTCGACATGGAGAGCAGATGCATGCGCGATTCGCTGCTGCCGTTACAGCACTTACTGCCGTTGCGCAATGTGGTGGTTTGCTTGCAGTGTGTAACCGCGTGCGAATTAAGTTTTTTCCATCAGCCCGCCATGAGCGCATTCCTGCGCAATTTACTGGATCACCCGGATCAGTTCGATCAGTTCCTGCTTGCCGATACGCCCGAAAGCGGTCGTCTCTTTTATAACGAAGGTGATTTTTACCGATTTACCGTGCTTGCACTGGCCGGTGGTGAGGCGCTGTTGGCGCGCCTGCTGGCCCGTTTGCGCAATTTACCTGCGGCGGCAGTTGCAGCCCGGTGCAGCGGCGCGTTTGCCGATAATTGGCGTTGCGCGGGCTTTAGTGATGGCTTTAAC # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.64, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTCGCTGAAGGCTTAGCCGTTAAGGCTGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.80,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-31.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,0.78 Confidence: LOW] # Array family : NA //