Array 1 782132-783940 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZAJ01000001.1 Methanolobus tindarius DSM 2278 MettiDRAFT_Contig28.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================================================================================================== ================== 782132 37 100.0 38 ..................................... ATTTAGCTACTGGATACATCAGCCGCCGACCTGTGCAA 782207 37 100.0 36 ..................................... CACTTCCTTTGTTATGGGGAACCTGCAGGTTCTTCC 782280 37 100.0 36 ..................................... CTATGAAAGATTCATAATCTGTCGTTCCGAATTGGC 782353 37 100.0 36 ..................................... TATTTCCACCACCATCTACTGGCCACTGTGTTTTAA 782426 37 100.0 37 ..................................... TCAATAGCATATACTGTTCTTGTGCTATCAGAATAAA 782500 37 100.0 37 ..................................... CCCGATGAAGATATAGAAGGCGTGAGAATTCCAAAGA 782574 37 100.0 39 ..................................... TGATTCTACCGTCTGGTGTTATACAATGCGTGATTTTTG 782650 37 100.0 38 ..................................... CTTATATTTCTTATTCCTTCATGCAATGCGGACTCTAA 782725 37 100.0 35 ..................................... TACATGTAAAGTCAAGACCTGTCAATATGGGTCTT 782797 37 100.0 45 ..................................... AAATTGAAGATGACAATCAGAACACAATTATACGACAGTACCAGG 782879 37 100.0 36 ..................................... AATGTATAAGTTTTATTTTCGGTAACAGTAAAAACG 782952 37 100.0 35 ..................................... ATAGGACTTGGTGTTGCATTCTGCTGCTCTATTTC 783024 37 100.0 39 ..................................... TTAACCATCCTGTCTTCCTCACTGAAGTTTGCAGAGATG 783100 37 100.0 36 ..................................... ATGAACCAGCAAAATTCCAGTATCCGCCGCTTTCAG 783173 37 100.0 34 ..................................... CTCGTTTAAGTGGTGGGAAATAATGAAAAAAATT 783244 37 97.3 37 ....................................C TCTTGAATACCATCATCCGTAAAGTGAGTTTTCCTGA 783318 37 89.2 32 .........C...C..........T..........T. CATATCACGGATATGGGTTTTTATAATATAGA 783387 37 78.4 35 ...G..G..C..T.....GC....T...........C AGATAATCTCCCATATCATCAATTGCCCACGTCCA 783459 37 70.3 36 G..G.G.AA.C.TT....C................GC CAAACATACTGATAAGTTGGATAACCAGAAACCACT 783532 37 83.8 115 ...G..G.....T...........T.......A..C. GTGAATGACTTTCCAAGAGTTATGTCCAATTCAAAGTTACCATAAAATCGAGCGTCATCCACTATAACAAGGATTGAAACACATAATGCGGTGTGATATATGTCGGTGCGTTCTC 783684 37 75.7 35 ...G...ACC..C.....CA............TC... CAGTGTTCAGTCACATAACGAGCCAAAGGGACTGT 783756 36 83.8 35 ...G....-..CT...........T...........C AATATCTCAAATGCCCTACCTTGGGAAGCAATATA T [783762] 783828 36 78.4 37 G......A..-.CT....A................CC TCCAAACTATATAAAATCCCCCTGTGACACAAGACAT G [783830] 783902 37 75.7 0 ...A...A.C..A.....C.....T....C..C...A | A,C [783933,783937] ========== ====== ====== ====== ===================================== =================================================================================================================== ================== 24 37 93.0 40 ATTCAAATGTAAGATCCATTAAAACAAGGATTGAAAT # Left flank : AAGAGTTCTTCTATTTCCAACAAAGACGGTGGCTATTTTCATTTCATCACTGATCCATGGAATAGATACTGGAGCAGGAAGGCAGAAAATGAAATACGATAGAAATAGGTGAAGTCATGCAAAACCCATTACGTAAGTATATTCTAACGATTCTATGGGAACATTATACGGGTCTGACAGCTCAGGAAAAAAGGTCAATAAAGGATATATTTGTTACACTAGCATCAATAGTCTTGTAAAGGAATTGGAAATCACTCCGTTAGATTTCACTAAGACAATACATATCATCAATGGCATACTTGAGATTATAGATAAAGGCAAGCACCCTAAAGCAACAGGATTCGGAAATAAATACATTGACTGCTGCTAGAGGAACATCTGCGCATAGCACTATTTTCTTATATTTTTAAACCATTTGATAATTGTGCAGCAAGAATGTACATGCTGTAAAAGGAAGCTTTATAGGCAATGTCAAGGCAAAATACGGAAATATTTGCGCT # Right flank : ACCTAATCAGTCGGAAAATTCAGATACACTTTCATGACAAAAAAAAGCAGAAAGTCCAGGCAGAATGTGTCACTTGAAAGTGCAATATTGAAACATTCCAGGAGATCTCCCTGGTCAAAAGATCTCGATCATGCTCTGACTGCTATGAATACCTTTACACCTGACGACCAGGAAGGATTGAACAAATGGTATGCTCAGCCAAACAGGTATGATATCATCGGAATTGATGATAACCCTGGCAAACAGTTCTACTCACCAAAGAAAACCAGAAGATCCCAGAAACAAAGAGTTCCACCAATCACACCAAGATCTGCTCTTGCAAAGAAGAACAAGAAAAGCAGTGAATGGGATGTGATCTCTCCTAATCCTAAATTGCCAAAGGAACTTAACAGATCAGCCGGGAACTTTTCTTCGCACGAACTGGATATCCTGCAGAACAGAGTGACCTATGGAATTGAAACCCGAAGAGGAGCTGCAGGTTTTCATATCTATGATGAAAA # Questionable array : NO Score: 5.63 # Score Detail : 1:0, 2:0, 3:3, 4:0.69, 5:0, 6:0.25, 7:-0.31, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCAAATGTAAGATCCATTAAAACAAGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.68%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-55] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA // Array 2 804146-806895 **** Predicted by CRISPRDetect 2.4 *** >NZ_AZAJ01000001.1 Methanolobus tindarius DSM 2278 MettiDRAFT_Contig28.1_C, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 804146 37 100.0 38 ..................................... CAGACTATTATTTCCTCACTGGAATGATAGCATAGACC 804221 37 100.0 37 ..................................... ATGAATCATATATGAATGATTCATTAGATGATGAATT 804295 37 100.0 37 ..................................... GAGAAAGGATCTATCGGTATCTCCCTTGTAGATACAA 804369 37 100.0 34 ..................................... CTGAAAGTATAGACATTTCAGAAAAATCAAGTAA 804440 37 100.0 36 ..................................... ATAGATTAGATATTTTTGAGATAAAAGAAGGCTTGT 804513 37 100.0 36 ..................................... TTTAGGACGAACTGTTCGCACTGATTAAAACAGATT 804586 37 100.0 37 ..................................... AGTAAATGGACTGTGGAGCATCGCGGCTGGTTACCGT 804660 37 100.0 38 ..................................... TATATTTCCCTATAAAGCATAACCCTACTTAAAGCTGT 804735 37 100.0 37 ..................................... AATACTATAGAGTACTATAGTATATTGGTAATGTATG 804809 37 100.0 36 ..................................... CTTTAAAACCCTTCATATTAGGGTTTTCTTTATATT 804882 37 100.0 39 ..................................... TTTCCTTTATTATGGGGAACCTGCAGGTTCTTCCATGTC 804958 37 100.0 35 ..................................... CATGATTAGCCTCTGTTTCAAAATAGCTCATTAAC 805030 37 100.0 34 ..................................... ATTCTACTAGCATTTTATATTCTTCTAATGATAT 805101 37 100.0 36 ..................................... ATAAAATCAATGGCTTCGCTATATGGAGGATTTGTA 805174 37 100.0 37 ..................................... TGATAGTTGCCGGTGTTCTTGGTATGTCTGCACGCCG 805248 37 100.0 37 ..................................... TTGTAGTGCCTGATATTGTAGCCGGTGGTCTCAGGTC 805322 37 100.0 38 ..................................... ACTAATATAATCATACAGGCATGTAATGATATTGGATT 805397 37 100.0 36 ..................................... ATTTTTTCTGTATCTTCTTTTGCTTCTGCCTGATTG 805470 37 100.0 35 ..................................... TAGTTCTCACAAGTTTCTACTCTAGATTCAATTTT 805542 37 100.0 37 ..................................... AAGTAAAATCCATTGTAGCGGGAGTACTTGCCATAAT 805616 37 100.0 35 ..................................... ATACTCCTGTAGGAAGCATGCCATTCATAGTTATA 805688 37 100.0 35 ..................................... AGGTTTACCATTTGAAAGCCCCCTAAAAAAAGGGT 805760 37 100.0 39 ..................................... GACATTATTGCCCCTCCGCCCACATGATTACAGCCTCGA 805836 37 100.0 32 ..................................... ACTTCATACAAGAGTAATCCCCCCACTGCCGG 805905 37 100.0 35 ..................................... TTATGGGAACTATCCGAAAATGATTTCCTCTTCTT 805977 37 100.0 36 ..................................... AAACAGATTCATATTCAATTGTTTCAATCACTGTTG 806050 37 100.0 37 ..................................... CTGATAAGGGTATTGTCAAATCTCGTCTCCTTGTTTG 806124 37 100.0 37 ..................................... CTGGATACCTGGAAAGGACCAGAAATTAAATCATAAA 806198 37 100.0 35 ..................................... TTTTAGGATCCTTCAGGAATCCCGGCAAAAACTAA 806270 37 100.0 35 ..................................... TAGGATGCATCAACCCATGTATCAACTTCATTACA 806342 37 100.0 38 ..................................... ATAAGTTAATTGTAGTACCTGCTATTGCCGCTGGCGGG 806417 37 100.0 36 ..................................... TGTCTTTGAGTGCCTTGTCAAAGAACTTATCACCGA 806490 37 100.0 36 ..................................... CTGGATACCTGGAAAGGACCAGAAATTAAATCATAA 806563 37 100.0 39 ..................................... ACTGGAATATTTCAACACCTTTTGTTTTCACGCCATCTT 806639 37 100.0 36 ..................................... TGAAGTCATCAAAAAGACTCATGCTTCAGCCCCCAC 806712 37 100.0 36 ..................................... CGAAATCCCAACTTATGCCGAACTTTGTAATATGCA 806785 37 89.2 36 ....T.............T..T..............T AGGTTACCTAGATAAAATGCAGGACAGAATCCTCAC 806858 36 75.7 0 ............-.A...TC.T......A.A...TG. | T,T [806884,806887] ========== ====== ====== ====== ===================================== ======================================= ================== 38 37 99.1 36 ATTCAAAATCAAGATCCACTAAAACAAGGATTGAAAC # Left flank : AGAATCCGAAGTCTATGTCGTTTCCAAAGCCCACCACATAAAAGGAATAGTGGATGAAGTACTTTTTTTAGAAGATAATACTGCTGCTCCTTTGGAATATAAGTTTGCAGAATATAAAGATAAGGTATTCTCAACTTACAAATATCAACTTGTTCTACAGGCATTGTTGATAAAAGAGAATTACAACATAGAAGTTCAAAAAGGATATATCTGCTATACTCGTAGTAACAGTATGATTAAGGAATTAGCTTTTAAGTTATCAGATTTCAAAAAGGCTAATGACATCATCAAAGACATTATACAGATAGTTGACAAAGGAAAATACCCACAAGCAACAAAATCAAAGAACAAATGTATTGATTGTTGCTACAGAAATATATGTGCATGACATAGTTATCTTATACTTATAAGGAGTTCAATAATTTTGCAACAAGAATTAGCGTGTTCTGAAAGAAGCAATTTAAAGGTTTATTTTGCTAATAACAGGAAATATTTGCGCT # Right flank : CGGGAGGTGCGATTCGAACGCACGAACTCCTACGAGAATGGGTCCTAAGCCCATCGCCTTTGGCCAAGCTGGGCAACCCCCGCATAAAGAAGAGTAGTCATTAAATAAATTGTTCACATATTAATATTACGCAATGAGATATCTATTTTTCATAGAAATGCTATGAAGCCCTATGAATATGGTCCTAAGCCCTGCGCCTTTGGCCAGGCTGGGCAACCCCCGCAAAAGAAGCAACTAACAGATAACACACTAACATATTAATGTTGCGTATAAAAACATGTTTTTGTACACTTTTTTCTCAAATTATAATTAAGAAAACAATTCTAAACCAGTTTCAGAGGGACAATGTAAGGAACACCATTCTCACTTTTAGCCACAGCTTCAACACCATAGTGTACCCTCATGTTATTCTCATTCAGAACATCCAGAGGTTCTCCGGCAGCTACAATCCTTCCACCTGACATCAAAAGAAGGCGGTTAGAATAGCGGACTGCCATATT # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTCAAAATCAAGATCCACTAAAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : NA //