Array 1 102943-104414 **** Predicted by CRISPRDetect 2.4 *** >NZ_RCKJ01000003.1 Moraxella catarrhalis strain 130/563/4 NODE_3_length_176710_cov_11.636182, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 102943 28 100.0 32 ............................ TGCTCCCAGCCAATGACAAGGGTGGTAACCGT 103003 28 100.0 32 ............................ TAAAATCATAAAAAACCACTGTGTTTTATGGC 103063 28 100.0 32 ............................ AAAAGGTACAGGCGGTAACGCTGGAAAAAAAT 103123 28 100.0 32 ............................ GCCCACACACGCACACTACCCACTATCCTTAA 103183 28 100.0 32 ............................ GATTATGGCTACCAAATACACATAACCCCCCG 103243 28 100.0 32 ............................ TTGCTAAGCTTGAAAAAGAATTTGGGCGCTTT 103303 28 100.0 32 ............................ CTGCATACACACCTGTGATTTCAATGCTGTTT 103363 28 100.0 33 ............................ GCCAATCTTTGCTGCTCCTGCTGGACTTGAATT 103424 28 100.0 32 ............................ TAAGTGCTGAATTAGAGCGTTATGCGTTAAAA 103484 28 100.0 32 ............................ TGTGTGATTGTCTGTTTAACACACCAGTGATA 103544 28 100.0 32 ............................ CCTGTGGTTACGCCCAGATAACGGATAGATGA 103604 28 100.0 33 ............................ TTCTACAACTGGCACGACACGGATAATCTTAGC 103665 28 100.0 31 ............................ TGTAACAATTTCAATGGACTTGCTTTCAATT 103724 28 100.0 33 ............................ TTGACTGCTACCCTGCCGAGTGCTGTGGGCTAA 103785 28 100.0 32 ............................ TTTAACTCAAGATACGGCAAACAATTAATACC 103845 28 100.0 33 ............................ GTCACTGATTTTGCTAAATCTACCCAGTTTGAC 103906 28 100.0 32 ............................ CCAAAGATCATAGCCTGATCCTTTTGTCGCAC 103966 28 100.0 32 ............................ ATCTACTGTGGGTTTTTGAAAGTCGCTGTTTA 104026 28 100.0 32 ............................ AGCCACAACACCAAGTGCACCCCAAAGATCAT 104086 28 100.0 32 ............................ TAATAACTCTTGATTTAACTTGTAATTAGGGT 104146 28 100.0 33 ............................ ATAATAGGGGCTTGTTTATATGTCATGCTCATT 104207 28 100.0 32 ............................ GTGCTGAATGTGAAAGCATTGCATGGTCGGCT 104267 28 100.0 32 ............................ ATCTTTGCACATAGAGACCAAAACCTTATCAA 104327 28 100.0 32 ............................ AAGCGATTAATCCGCTCACCAATTGTTCTGTT 104387 28 96.4 0 ..........A................. | ========== ====== ====== ====== ============================ ================================= ================== 25 28 99.9 32 CTTCACGACCGCACAGGTCGCTTAGAAA # Left flank : TGCCTGTGCCAAGTAAAATGACCGTCGTGTTGGCGATCGGAATATTATAATAGTGGTTTTGGTATTTCGTTTCGGTCAGGTACAAGATACGCCCATCTTTTTGCATGACTCAGCAATGCTCAAGATAAAATAAATTCGCCCGTTTGGAGTGTAAAATTGCTTTCAAATCGGTCGGTTTGAGCGTACTCATGATGACACAAATCCATGTTTAATGATTCAATTTTATCCTAACAATTTTCAACATCATTTAATATGATTTTATTGGATTATAAACTAAAAATAAATTTATACCAATCATTTTTTAATTGTATTTAGCGATTAAAATGTTTTAAGATAACCCAACCAGAAGATGGAAAAATAACTGATTGACCCTTTATTTTTTTACTATTTAAAAACTTGAATATTTTCAATAAGTTATAACATGAAGATTTTTGATTGGGTTTTTGACAAATTTTATCATAATGACTTGTTATTTCTTATTATTTTGGTTTATACTAACT # Right flank : ATTTTGTTCTATGGCTACGCTGATTATTTAAAATTTTTGTGCCAATCCCTTGAAAATTTTATCCTTAACCATTATGAAGATGGGGAATTTATATTAACTTTTTTGGGGCAATTTATGACCGAGCAAACCACCGAACAAACCACTATGGAAGAGATTATGGCTGAGACGACAACCGAGCAAGTCGAAGCACTTCATAGCCAAATCCAAGCGCTAGAAAATGAAGTCAAAGAAGCCAAAGAGACTGCTGCGCGTGCCAATGCCGAAAGCTATAACGCCCAACGCCGCATGGAACAAGAAACCGACAAAGCCAAAAAATTTGCACTACAAAAGTTTGCCAAAGAGCTTTTGGAGGTGGTTGACAACCTAGAGCGTGCCATTAAAGATGCTGAAGAGACAGGTGCAGATGACGCATCACTTAAAGGCATTCGCCTAACACATAAAGTACTGCTTAGCGTTCTTGAAAAAAATGGCGTCGTGGCCGTGGGTAATGTCGGTGATAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACGACCGCACAGGTCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTTCACGACCGCACAGGTCGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.40,-7.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [81.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //