Array 1 535114-531911 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHBFX010000009.1 Leuconostoc gelidum subsp. gelidum strain AMKR21 NODE_2_length_633488_cov_84.716156, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 535113 36 100.0 30 .................................... TTACGTTGATGTTGATGGGCAAAAAGCTAT 535047 36 100.0 30 .................................... CTACACCAAAGTGTTCTTTGGACTTGACGG 534981 36 100.0 30 .................................... ACAACCAATGACCTGAAAGGTCATTTAACG 534915 36 100.0 30 .................................... CCCAAAAGAAAAACAAACGGAGTTATTGGC 534849 36 100.0 30 .................................... ACGTTTCTCGGTACTCGTTACGTTTATTTT 534783 36 100.0 30 .................................... CTCTCTATTACGATATATGATTCACCTTTA 534717 36 100.0 30 .................................... ATGAACATGTGACATTCAGAATAGAAGAGG 534651 36 100.0 30 .................................... TATAGGCTTCAATACGTTGGTAGGCACGGT 534585 36 100.0 30 .................................... AACAAATAAACATTGCAGGGTTAGGCATGC 534519 36 100.0 30 .................................... TAAGATTGTCAACACTACCGCCAACACATA 534453 36 100.0 30 .................................... CATATTTTATCGTGTCAGAATACATCCCCT 534387 36 100.0 30 .................................... TTATATACAAGGCTATACGACATAGATGAT 534321 36 100.0 30 .................................... CTTGAACTGAATCCCAACCATACTTCTTGA 534255 36 100.0 30 .................................... TAAAGTAGAAATGCATGATGTGTTTATTGA 534189 36 100.0 30 .................................... GAGCTTTTCATGACATCGCCAGACAATACG 534123 36 100.0 30 .................................... GGTAGATGCAGGTGTTTATCAATCCGTGGG 534057 36 100.0 30 .................................... CACCAAACGTTGGTATCAGTCAAAATTGTT 533991 36 100.0 30 .................................... ACTTAGTCCTTTTATCGTTTTCGTCCACCT 533925 36 100.0 30 .................................... TAATCTTTCTTGCGCTAATTCATATACGTT 533859 36 100.0 30 .................................... ACGAGAGGAACAGCTAATAGCAGTAATGGG 533793 36 100.0 30 .................................... GAGAAATATAAGGTCAATGATTACGACTAT 533727 36 100.0 30 .................................... AGCTCCGAATAATATATTTAACTCTTGCGA 533661 36 100.0 30 .................................... ATCTTGCAGGAACAAGTGGTGCTTGGGTTA 533595 36 100.0 30 .................................... AAAAAAATCATGTAGTTTATCTCTAATTGT 533529 36 100.0 30 .................................... TTTCGCTGATAGCTTGTTAATGAACACACT 533463 36 100.0 30 .................................... GGTATGGTCGGCTACTTGGAATGTCGTTAA 533397 36 100.0 30 .................................... GACGATGCACAAGATTGGATAGATGAGTTG 533331 36 100.0 30 .................................... ACCCAACTATCTTAAGTAGTCAGGTCATAA 533265 36 100.0 30 .................................... ATTAAGTCCATTATTTCAATAGCTCCTTTC 533199 36 100.0 30 .................................... CTTGTTATAGCCCGCGCCTGCTTCATAATC 533133 36 100.0 30 .................................... TGTTTGGTCTTGCAAGTCACGCAATAATCC 533067 36 100.0 30 .................................... ACTAGACGATGACTTTGTTCCAGCTGAATT 533001 36 100.0 30 .................................... GTTAGGATACATTTTAACCAAGTATCCTGT 532935 36 100.0 30 .................................... GCGATTTGAAAGATGTTGCCGTCAATCCGT 532869 36 100.0 30 .................................... CAGATAGGCGGCATTGCTAAACTATTTGTA 532803 36 100.0 30 .................................... ATTGAGGAGAAAAATAATGAACAAGAAATT 532737 36 100.0 30 .................................... GATAAGGTAGCTGCTAAGCAAGCAGAAGTC 532671 36 100.0 30 .................................... ACCGTCCATGTACGCCTTACTGTTAACAAA 532605 36 100.0 30 .................................... AATAATACTGAACACTATCGCCTGACTTAA 532539 36 100.0 30 .................................... GACCAATTGGTTTAACCGGTGCTACAGGAC 532473 36 100.0 30 .................................... GCGTTGTCTGAATGCCCTTGTCAACCCATT 532407 36 100.0 30 .................................... GGTCGATAAAACGATCGAAGAAGCGCTTGA 532341 36 100.0 30 .................................... AATAATTTTTTTAGTAATCCTGTCTGCTTG 532275 36 100.0 30 .................................... TGTTCCGCGTTGGAATTACATTGGCGACGC 532209 36 100.0 30 .................................... GTTCATCTTGTTTAATACGTACTATTATTT 532143 36 100.0 30 .................................... ATCAGACTCAGGTAACAGATTATATACAGG 532077 36 100.0 30 .................................... TACACAATTTAATGCAAAGCCATTGCTCAG 532011 36 94.4 30 ...........................A.......T GTATCGGGAACAGGATATCAGATCTTGAAG 531945 35 77.8 0 .............AC..T..T...A..A..-...G. | ========== ====== ====== ====== ==================================== ============================== ================== 49 36 99.4 30 GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Left flank : GGTGCGCAACTTGATGTGAATAAGTTGTATCAAAAAAATATCGTTAATACAATGAAAAATTATGCAGATGATCAAGCGTTAGAAGTGTTTTATAAAATAAATTCTGAATTAAATCATGTCTTAGAAAACATTATATTAGAGAATAATTTGCCCTTTTATTTTCAAACAGAATTCAATATTGTCGAATTAATAAATGAGAAAAAAATTAAGATAGAAACACTGACAAACAGCTCTGGATTTGGTAAAATAGAAGATGTAGTAAGCGTTGCTGGTGAGTTTTCAGAGCAACGTTTAATCGTTTTTACGAATTTGTATTTGTTGTTATCGGTTGATCAGATTGACTATCTGAATAATCTAGCGAAGACAATGAATTTATGTTTAATTTCTCTTAATTTGACACAAAACCCTGTTATGACTAAACAGGGTCTACCTCCAGAAATCTTTATTGATGAGGATTTCGTTCAATTTGGTGCTGACTAGCTGATGCGAACAGGCGGTCT # Right flank : GCTTAGGCGCTTTTTATATGCCATGTATGTCAAAAAAAGGTTTACGCGAATAACGATTATGGTATGATATATTATGTTATAAATAATCACGTCAAACGTGAGATGGAGAAAGGGAGATTTTCCTGTTTTGGTAAATAAAAAATTGCGAGTGAAAGAACTACTAGTTTCAACAATAATTATTGGTGGCGTTATGGGCACCATGTCTACGGTTAATGCTGCTGAAAATACAGCGCATGTATCGACACAAGTGCCAAGTACAATAACATCAGGTTCGAGTGGTACATCACAAGCGCCAAGCACTAAGACATCAAGTTCAACCATAAATGAGTCGAGACAAAATGATAATTATAATGTGACGCCGTCAACAAGGTCTATTCAAGTACATCAAGCGAAATTTAAAACCGGTTCTGTAATTGTATTGACCACTTCAGCAAAAACATCCAGTGGTACACAACTTCAAAAGTATGGTAATCAATCAGGTGTTGTGACGAATGTCATAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTCAGATGTGTGTCAGATCAATGAGGTTTAAACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-2.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //