Array 1 5908849-5907844 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP071465.1 Streptomyces nodosus strain ZJB2016050 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5908848 29 100.0 32 ............................. TCTTCGACGTGAAAGAGTCCGTCGACGACGCT 5908787 29 100.0 32 ............................. GTCCCGGAGGTGGTCCTGTCACCGTCCGCGAA 5908726 29 100.0 32 ............................. TCGGTGAAAAGTACAGCTGTCATCGCGTGCCA 5908665 29 100.0 32 ............................. ACCGCGTGACTGCTCCCGTTCGGGTGGGCCCG 5908604 29 100.0 32 ............................. TAATCGGAGCAGAACATGCCCTACATCACCGT 5908543 29 100.0 32 ............................. CAGGCCCCCAGGTTGCTGCGGGTGATGCGCAA 5908482 29 100.0 32 ............................. TACAGGTCGAAAGCGAGCCTGCGGAGGTCGGT 5908421 29 100.0 32 ............................. CGTTCATCACCGCCGCCCGGCAGGCGCAGCAG 5908360 29 100.0 32 ............................. ACGTCGCCACCACCGTAGACGGCCCCGGCCCG 5908299 29 100.0 32 ............................. GCACTCCGAGACCAGGCAAAGGCAGCCGAGCG 5908238 29 100.0 32 ............................. TTTCTCGGGTCCGAAGTCGTCGGGCGTCTCGA 5908177 29 100.0 32 ............................. GACACTTCGCCCCCGCCTCCGCCGAGAGGTTC 5908116 29 100.0 32 ............................. GGAGTACCGATACGGTCAGCGCTCGCACAGGC 5908055 29 96.6 32 ...............A............. GTGTCCGACGCCGTGATCGGGGTGCTGTTCGG 5907994 29 100.0 32 ............................. ATCACTGCGAGGCACCCGCCGAGGTCCCGGAG 5907933 29 100.0 32 ............................. TCCACGTCAGTCTCCAGTCGTTGGGGGCTGGT 5907872 29 93.1 0 ..........................CA. | ========== ====== ====== ====== ============================= ================================ ================== 17 29 99.4 32 GTCCTCTCCGCGCGAGCGGAGGTGAGTCG # Left flank : ACGCATCGTCCACGACCTCCAGGATCTGCTCGACCCCAGCGGCGACAGAGAGGTCCCCGATCCCGAGGAACAACTGGTCGACCTGTGGGACCCGGTAGCCGGGTCTCTCCCCGGCGGGGCCAACCATGGAACCGGATCATGAGCCCCGCCCAAGGGGAGGTACAGCCGCCGTGGCCTCGATGATCGTCCTCGCAGCCTCCGCCGTCCCCGACCACCTACGCGGTGCCCTCACCCGCTGGCTCCTCGAAGTCACACCCGAGCTGTACATCGGCACGGTCTCCGCTCGCGTTCGCGACGAACTCTGGGAATCCGTCACCGCCTGCGCCGACAGCGGCACCGCCGTTCTGGCCTATCCCAGCGACAACGAACAGGGCTTCGAACTTCGCACTGCCGGCGACCAACGCCGCGTCCCGGTCGATTTCGACGGACTGACACTCGTATCATTCACACGAGATAGCAAAGAGATGGCAAACCTGCTTTAGCCCTGCAGGTCACAAAGG # Right flank : GCGGTCACGATGTCGAGATCACCGATGGCGTGAACCGGCCCTCACCCCGTTGGACGGGCAGGGGCTGTGGGTCTCGGGGCCCCGAAAGGGCCCCAGCAGGTTGTCAGCCGACCACCCGCCCATTCAGCACCACCCGTCGCGGGGCCGCCAGGACGCGTACGTCGGTGCGGGGGTCCTCGTCGTAGACCACGAGGTCGGCCGGGGCGCCCTCCTCCAGGCCGGGGCGGCCCAGCCAGCGGTGGGCGGACCAGGTGGTCGCCGAGAGGGCCTGGAGGGGCGGGATGCCGGCCGTCACCAGTTCCTCGACCTCAGCCGCCACCAGGCCGTGAGGGAGCGAGCCCCCGGCGTCCGTCCCCACATACACCGGGATCCCGGCGTCATAGGCGGCGCGCACGGTGTCGTAGCGGCCTTCGTGGAGTCGTCGCATATGGGCCGACCAGCGCGGGAACTTGGTCTCGCCGCCGTCCGCGAGGCGGGGGAAGGTCGCGATGTTGACCAGG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAGTCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCCTCTCCGCGCGAGCGGAGGTGAGCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 5918583-5919283 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP071465.1 Streptomyces nodosus strain ZJB2016050 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 5918583 30 96.7 31 .............................C CAGCCAGTGCTTGAGGACGGGGGCGGTGCGC 5918644 30 96.7 31 .............................A AGGGGGAGATCTGGCTGGTCGGCCACGGCCG 5918705 30 96.7 31 .............................T CCTCCACGTGAGTCTTCGGGATGACCAGCGT 5918766 30 100.0 31 .............................. TGTACAGCCCCGGCAGCAACTCCGGACGCCC 5918827 30 96.7 31 .............................T CTTCGACGTCAAAGAGTCGGTCGATGAGGCA 5918888 30 100.0 31 .............................. TCCGTCATCACCTGCCGTAGTTCCCGGGCGG 5918949 30 96.7 31 .............................C CACAGACGCGCGCGGGTGAGGCAGCGAAAGA 5919010 30 96.7 31 .............................A ACTGGGCCGTCGTCGCCCGCATGGCACAGGG 5919071 30 96.7 31 .............................C AGGTGGCGGCATGAGCGCCCGCCCGCACGGT 5919132 30 100.0 31 .............................. AGGTGCGGGCGCCCGTCCGCGTGCAGGAGCT 5919193 30 96.7 31 .............................T TCTGCCGGGCTATCAGCGCGGTCGCGAAGAG 5919254 30 90.0 0 ........A.................TT.. | ========== ====== ====== ====== ============================== =============================== ================== 12 30 97.0 31 GTCCTCTCCGCGCGAGCGGAGGTGAACCGG # Left flank : ACACGTACGCGGGCTCGTCGCGCACCGCGTCGAACAGTTTGGGAATCTGAGCCTGGAATGCCGGTGTGATTTTTCCCAAGTCATGCAGCCCCGCCCAGAGGGACAAGACCGACCGGCAATCTTCCCCGTGCAGACCCAGCTGCTTGGCGAAACGCAGACGCGTCCGCTCGCCCAGCAACTCGTCCCATAGCGTCGTGAACGCCGCTGCCACATCCAGCAGGTGACACATCACTGGGTAGGGCTGGCTCAGCCCATGCTCCTTCCCCCACAGCCGAGGGTCAGGGCACGCGGGGACCGAGGGCACGCCTTGAGCTTCCGTCATGCACCCACTTGCTATCAGCAGCCACTGACAATGCCCCTGAACAGCAAGAACACCAACCGAATCGCAAGCGGGCGCCTTACACTGACCGCAAGAGCTAACCACCCGGGAAGTGTTGATGCCTGCCGTTGGCACGAGTAAAGAATTGGCAATGCCCCTATAGCAGTGCAGGTCGCAAAGG # Right flank : GTGACGGTCTGGAAGCGCGAAGTGGATCAGCCTCGGAGTCTGGCGGAGTCTGTGCTGGTGGGGTGAGTTTTCAGGGCCTCGACGAAGGTGGTGAAAGCTCTGGTCGGGAAGGAGAGGGTTGCCTTGGCCAGAGCCTTGGAGTCGCGTATGGATACGTGGGTGGGTGACTTGGCGATCTCCACACAGTCGTTGCCGTCGCCGGGGCCCGAGTAGGAGGACTTTCGCCAGTTGCTGGGGGTGGCCATGGTCATGACGCCTCATAATTCCTTCGCCAGCCTGTGGATGAAGTCACGGGACTGGTCGGGTGGGAGCGATACGGCTTCCACTTTACGGAAGAGCGTTCGAAAGGCGTCCAGTTGATCCTCTGAGTCGATGAACGCGGTGCCGTGGGGTGCGTCTCGAACCACCGTGTCGAGCCTGGGCATCGCGCCGCCCGCGTATTTCATCGTGCTGGTGGCTCCGGCGAAGCCGTCCAGATCGAAGGGGATGACGCGCAGGGT # Questionable array : NO Score: 5.52 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCTCTCCGCGCGAGCGGAGGTGAACCGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGAACCGG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [45.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //