Array 1 49581-46867 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ959765.1 Corynebacterium sp. DNF00584 Scaffold135, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 49580 29 96.6 32 ............................G TCTGCGATGCCGGTTGAAACGTCTCCGAGTTC 49519 29 100.0 32 ............................. ATTTTGTGGGGCTTGAGTTTCCTGACGAATAG 49458 29 100.0 32 ............................. TCGATTTTTTGGCCTGCACGCCCCGGGGTGTA 49397 29 100.0 32 ............................. CCCTTGGGGACTGGCATAGTTGTCATGCGTGC 49336 29 96.6 32 ............................G TCACCACCGATGATGTGGAGAAAGCCGCGACG 49275 29 100.0 32 ............................. GACTGTGGCCTTGGTAGCTGCAGCGGCTTCGT 49214 29 100.0 32 ............................. TAGTTGACGCTTGATCTCCTCCAGCGCGGCGA 49153 29 96.6 32 ............................G ACTGCACCGCTTCGCTGGCACCGTCGAGCTCC 49092 29 100.0 32 ............................. CTGGGCGGGTTGCTTACGACCATTACGCCCCA 49031 29 100.0 32 ............................. GGCGTAAGCGTTGACACGGTACAGGTTCAGAT 48970 29 100.0 33 ............................. GAGTGGATGGATCGCGAGGACGCGGCTAACGCC 48908 29 100.0 32 ............................. ATCGGTGCTCGATCAGGCCCGCGACATGCACG 48847 29 100.0 32 ............................. CACGGGCGGCACGGGCTCCCCCGCGCGGATCG 48786 29 96.6 32 ............................T ACACCGTGCGGGGTGGCAATGAGCCAGATCGA 48725 29 96.6 32 ............................G GCGATTTCATGCCTAGGCCATACCGCCGCGCG 48664 29 96.6 32 ............................G AAGCTGCTTCGCGAGAACACCGCAGACTGGGT 48603 29 96.6 32 ............................G ATGCGCTGCCACGTCACGTCGTTGATGTAGAA 48542 29 96.6 32 ............................G AAAGCCGCCGACGCCGCGAACTCATTAGCGAA 48481 29 96.6 32 ............................G GTCGAGCTGGGAGAAGTCGAGTACGGTCTCGA 48420 29 96.6 32 ............................T TCCCATCGTGAGAACAGCACCAAACATGACTA 48359 29 96.6 32 ............................T CTCAGTGAGACGTGAGACTTCAGTAAGTGCAC 48298 29 100.0 32 ............................. TGGAGGTTTAATCATGGGTTACTTTGAACCGT 48237 29 100.0 32 ............................. TTGCCATTGAGATCGGGAACGCCCTCGATAGC 48176 29 100.0 32 ............................. CAATTGTTTGTGTTCAGCTTCTTCAAGGACGG 48115 29 100.0 32 ............................. TACATGGCGCTTGTTACGTGGTCGGCGATGTT 48054 29 100.0 32 ............................. TGGGAGCGACGGCTAGGCGAGTTGTCTAACCG 47993 29 100.0 32 ............................. GTCGTGCCCTTGTTTTTCCCGTCAAGTCGGCA 47932 29 100.0 32 ............................. GGCTAAGGACGCGGATTACCTTGAGCGCACAC 47871 29 96.6 32 ............................G TGACGATGGATACCGACCCGGCGGTCGCGACG 47810 29 100.0 32 ............................. GTACCGGGTTGAACCGCCAGCAAGGCCCAGTA 47749 29 96.6 32 ............................T CCGGGTGAGCACATGACGCAGGGGGTGGGGTT 47688 29 96.6 32 ............................G TCGCCACCCGTATCTATACGCATATATCCACC 47627 29 100.0 32 ............................. CGTCGCGGGCACCTACGACTTCGCAGGTGTCG 47566 29 96.6 32 ............................G ATCTCCGCTACAAGCTCATTGAGTTTCACGAG 47505 29 96.6 32 ............................G GGATACCGCCGCTTCGAGCGATCATGCGCCAA 47444 29 100.0 32 ............................. CCCACTCTCACCCTTGACCAAATCCGTGAGCT 47383 29 100.0 32 ............................. GTGGCGAGGACGATAGCGAGCATGAGGACGAA 47322 29 96.6 32 ............................G GCGTTATACGGTGCTAGGGGTAAGTGAGCTTA 47261 29 96.6 32 ............................G TGGCCAGGAAAGTACCGCGCGAGGCTATAACC 47200 29 100.0 32 ............................. CATGCCCCGGACGGTCGCCCGTGAGCTGCGGC 47139 29 100.0 32 ............................. ACTGTTAGCTGCTCGAACGTGAGGTAGTTGTG 47078 29 100.0 32 ............................. CGCTCAACTTATCGGCGTCTCAAAATCAGCGC 47017 29 100.0 32 ............................. GTAGCCGGATCGCCCTCAGCGGAACGCTCACT 46956 29 96.6 32 ............................T GCGCCCACCGGCTGCTTCCACTCCGGGACCGC 46895 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 45 29 98.6 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : GGTGCTCCCCGCGTGAGCGGGGATGAGCCCATGCGCCAAGTGCGGCAAAACCCAACTACGAAGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGTGTTGCGTTGTATCGCGAATTCCTTACCAGGTGCTCCCCGCGTGAGCGGGGATGAGCCGTAATGACCCATCGAATCTCGAAGGGCTCGAAGGTGCTCCCCGCGTGAGCGGGGATGAGCCCCGCTCCGGTGTGGCCCTCGACCTGCGCCCCACGTGCTCCCCGCGTGAGCGGGGATGAGCCGGAGCTTGTCTTCGGGAACTTCCTTGATGTGGGGTGCTCCCCGCGTGAGCGGGGATGAGCCCAGAAGAGGAGGGGCTTTTCATGAGCCTGTCTAGTGCTCCCCGCGTGAGCGGGGATGAGCCGTCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : CTTGCCAACCGCCTTATGAAAAGAAACCTTGGGAACTTCCCACATGCGCGGCGATAATGGTGCTCCGCCTACAGCGCCGCCAACGCCTCGCCCACGCGCTTGCCGGAGTGGATGCAGCCGCCCAGGAACGTGCCTTCCAGCGCGTTCTTGCCGTGCATGCCACCACCGCCGAAGCCGGCGGCCTCACCGCAGGCGTAGAGCCCCTCGAGCACGGTGCCGTCAGCGTGGAGGCAGCGGCCGGAAAGGTCGGTTTCGATGCCGCCCAGCGTCTTGCGGGTGAGCACCTTGAGGCGCACGGCGATAAGTGGGCCCTTGGATTCGTCGAGCAGCCGGTGCGGTGGGGCGGTGCGCACAATCTTATCGCCCAAGAATGCGCGCGCGATGCGGATGTAGTTGACCTGCGCGTCTTTGCTAAACGGGTTGTCCAGCTGCGAGTCGCGGTCTTCGATGAGGGTGCGCAGGGAGTCGAGTTCAATGCGCTCGTTGCCAGCGACCTTGTT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [48.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.64,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 52032-49685 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ959765.1 Corynebacterium sp. DNF00584 Scaffold135, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 52031 29 96.6 32 ............................G TCGCCGCCGGTGCTGTCGCGCTGGGCGGCGTC 51970 29 100.0 32 ............................. GCACGGGCGATTAAGGCGCTGGGGCGGGCGGA 51909 29 100.0 32 ............................. TCGCCAAGGTCTTTACCGGCCTTATCGCCCAG 51848 29 100.0 32 ............................. CCCCCATCATTCAGGAGAACATCATGGTAAGC 51787 29 96.6 32 ............................G GGTGAGGGTGGGTGTTTCGTAGCCGGGCATGG 51726 29 100.0 32 ............................. GACCGCCGTGTCGTCCGGTGCTGCCGTGGCCG 51665 29 100.0 32 ............................. TCATCGTCGACACGAACCCCGTGGGCTTATAT 51604 29 100.0 32 ............................. ACCACCAACCTGACCGGTGGCCAGTCGTCTAC 51543 29 100.0 32 ............................. CCCGGCACCTGGCGCGCAATCACAACCCTCAA 51482 29 100.0 32 ............................. ACCCCATCCGTCTGCATTCGACAGCTGTAGAG 51421 29 100.0 32 ............................. TTCACCCTGCGGGGTGAGAACAATCGGGTGGA 51360 29 96.6 32 ............................T GGATTTGGGTCTGTGCTCCATTCGGTGACTTG 51299 29 100.0 32 ............................. GGCGGGTAAATTCGCCCCGCAGCCCTCAGCGC 51238 29 100.0 32 ............................. TACTCCACCCACGCTGAAGCCCTGGCCTACGC 51177 29 96.6 32 ............................A CAATGTGGCCCCTCAAGGAGAACCAATGACTG 51116 29 100.0 32 ............................. TCGCCGCGATAATAACCCGGCCTAGAGGTTCG 51055 29 100.0 32 ............................. GGAACCAGAACCGGAATAGTCCGGCACGAGCA 50994 29 100.0 32 ............................. AACCGGTTTATTGAATCGTCAAAGAAACTACC 50933 29 100.0 32 ............................. TTTTTGCGCCCTACTCAATCCCGGCACGCCTG 50872 29 96.6 32 ............................G TCGGGCATGGATGCCACGAGCTCGGGCTCATA 50811 29 100.0 32 ............................. GCTGACGGAGCAACTCAGAGTGTGCATAAATA 50750 29 100.0 32 ............................. GCCGATGGCGTGCGCCGGTTCTCTATCAATGA 50689 29 100.0 32 ............................. GCCAGGGCAAGCGGGCGGAGGTCTTGAGTAGG 50628 29 96.6 32 ............................G TTTGTGCAGGTGCAGGAGGGAACGGCCCCCGA 50567 29 100.0 32 ............................. TTATAAGACACCGCGTGAGCTTGCGCAAATTG 50506 29 100.0 32 ............................. TCAATAGTGAATTGTCCCCGCGATGATACATG 50445 29 100.0 32 ............................. ATGACCGCGCAGTTGGCGGCTAACGGTGTCAA 50384 29 100.0 32 ............................. CAAAGGCGGCGGGGTACGCCCCGTAGCAAGCG 50323 29 96.6 32 ............................G GAGGAACCTATGACCACCATCTTCGGCGTTGA 50262 29 96.6 32 ............................T GAGGGAGGTGGTTATGGCTCTCATCGTTGTGA 50201 29 96.6 32 ............................G TCTGCTTTAGTGGCGAGTTCTACCGGGTCAAG 50140 29 100.0 32 ............................. TCATGGTGGGGTGCGCATACCTATCACGCACG 50079 29 100.0 32 ............................. ATGCGCCAAGTGCGGCAAAACCCAACTACGAA 50018 29 100.0 32 ............................. CGTGTTGCGTTGTATCGCGAATTCCTTACCAG 49957 29 96.6 32 ............................G TAATGACCCATCGAATCTCGAAGGGCTCGAAG 49896 29 100.0 32 ............................. CGCTCCGGTGTGGCCCTCGACCTGCGCCCCAC 49835 29 96.6 32 ............................G GAGCTTGTCTTCGGGAACTTCCTTGATGTGGG 49774 29 100.0 32 ............................. AGAAGAGGAGGGGCTTTTCATGAGCCTGTCTA 49713 29 96.6 0 ............................G | ========== ====== ====== ====== ============================= ================================ ================== 39 29 99.0 32 GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Left flank : GATGCTGACCTCTTCTTATGGAGCGAGCTCGAAACAGTTGCAGCAGGAGTGAATTGGGATTCGAAAGAGGCTAGCTGGGCATGATGGTATTGGTCATTACCGCCTGTCCTGCTGGCTTGCGCGGCGACTTAACGAAATGGGTTATGGAAATTTCCCCTGGAGTTTTTGTTGGTCAGCCAACGGCGAGAATTCGTGATATCTTATGGGATCGCACTGTTGAATTGTGTAAAGACGGTCGAGCTTTGCTTGTTTATTCGACGGACAGTGAACAGGGAATGGAGTTTAAAACTCATCGGCATGATTGGGTGCCGACAGATTTTGATGGCTTGTCTTTGATGATTCGTCCTGCGTCCGCGGGAAAACGAGATCGCTTTGGAAACGGTAGACGTAGTGAGTGGGCTAAAGCTCGTTTTAAGAAGCAACGCCGCTGAGGTGGAAGCTTCTCGACGGAGTTGGATCTAGAATAGGCCGTGCACTGCTGTTGTTGCTGGTTGCGAAGA # Right flank : TCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCTCCCCGCGTGAGCGGGGATGAGCCGTCTGCGATGCCGGTTGAAACGTCTCCGAGTTCGTGCTCCCCGCGTGAGCGGGGATGAGCCCATTTTGTGGGGCTTGAGTTTCCTGACGAATAGGTGCTCCCCGCGTGAGCGGGGATGAGCCCTCGATTTTTTGGCCTGCACGCCCCGGGGTGTAGTGCTCCCCGCGTGAGCGGGGATGAGCCCCCCTTGGGGACTGGCATAGTTGTCATGCGTGCGTGCTCCCCGCGTGAGCGGGGATGAGCCGTCACCACCGATGATGTGGAGAAAGCCGCGACGGTGCTCCCCGCGTGAGCGGGGATGAGCCCGACTGTGGCCTTGGTAGCTGCAGCGGCTTCGTGTGCTCCCCGCGTGAGCGGGGATGAGCCCT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGTGAGCGGGGATGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGTGAGCGGGGATGAGCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [3.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //